Clone BS07782 Report

Search the DGRC for BS07782

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:77
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG3793-RA
Protein status:BS07782.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07782.3prime Sequence

946 bp (905 high quality bases) assembled on 2006-01-06

> BS07782.3prime
ATGGTCTAGAAAGCTTCTAGTCAATGTTCAGCGAGGACATTAACTCTTCG
ACGGTGATATCTATATCCTGAAAGGCCACGCCCAGCCAGGCGACCACCAG
GCAGTAGTGCTGGAAAAGCTGGAGCAGCAGTTCACCCTCGTCCAGCATTT
CCAGCCGCTCGATTCGCTGCCTCTCGGCCGCCGAGATGCTCTCGTACACC
TGGACCATGTCCCAGGCGCGGGCGCCAGTCCAGCCGCTGTCCTTGAAGCG
GTTCCTCTGCGTATCCAGCGACAAGCAGGATTCAACGCCGGCCAGGCTGC
AGCCGCGTCCGCGCAGATTGTTGAGCATCACATCGCCGAAACGGTCGTTC
ATGTTGACCTGTTCGTAGTTGACAAAGACGGCTGCTTGGAACTTTTGCGC
AATCCATTTGAGCAGGTTACGGCAGTTTTGCGCCTCGATATAGACCAGAA
CGCACTCGGCGAGAAATATGGTGGGCAGGGAGTAATCAACTTCTGCCTGC
TGCAGCTTGCTGTCCACCTCGTCGAGGTTGCGCAGGTCAACGCCCATCAG
GTGGTAGCTTGGTCCATGCAGATCCGTGGGACTGAGCCGCACCTCACCAT
CCTCGTCGTGAATCCTGGCCAGCAGGGCCTTGTTGCGCTTAATTGTGTAG
CACTTGCGGGCGGTGACCGTGGGGAAGTCCAGCTCAATGAAGTTCTTCAC
CTGGTGGGCGGTGTCCCTCAGCCGGAAGTAGAGTGTGTCGAAGCCGCAGC
CCAAATTGATGATCTGGCAGTTGCCCGAGGTTTTCTTTAGAAACTTCTCG
ACGCACATCTCCACGCCCTTGACACGGGCAAAGTAGCCGCGATTGATCTC
CGGCGCCTTGCGCTCTTGGTTGCGCACAAAGTACCCGATGTAGTCGTCCT
TCCAGTAGCCCAAGCGCACCGCACATCGCTTGGCATCGCTGGCATC

BS07782.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-PA 1014 CG3793-RA 85..1014 946..17 4600 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 18:32:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-RA 1582 CG3793-RA 241..1170 946..17 4620 99.8 Minus
CG3793-RB 1738 CG3793-RB 241..1182 946..17 4490 98.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 18:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15764781..15765217 786..350 2155 99.5 Minus
2L 23513712 2L 15765270..15765577 361..54 1540 100 Minus
2L 23513712 2L 15764460..15764621 946..785 780 98.8 Minus
2L 23513712 2L 15765675..15765711 53..17 185 100 Minus
Blast to na_te.dros performed 2015-02-02 18:32:18
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 520..556 779..743 113 78.4 Minus

BS07782.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:23:40 Download gff for BS07782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-PA 85..1014 17..946 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:17:41 Download gff for BS07782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-PA 85..1014 17..946 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 17:46:59 Download gff for BS07782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 241..1173 14..946 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:02:14 Download gff for BS07782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 241..1173 14..946 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:02:14 Download gff for BS07782.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 15764460..15764621 785..946 98 -> Minus
2L 15764783..15765208 359..784 100 -> Minus
2L 15765273..15765577 54..358 100 -> Minus
2L 15765675..15765714 14..53 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 17:46:59 Download gff for BS07782.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15764460..15764621 785..946 98 -> Minus
arm_2L 15764783..15765208 359..784 100 -> Minus
arm_2L 15765273..15765577 54..358 100 -> Minus
arm_2L 15765675..15765714 14..53 97   Minus

BS07782.5prime Sequence

905 bp (831 high quality bases) assembled on 2006-01-06

> BS07782.5prime
GAAGTTATCAGTCGACATGGAGCCGCCAGCGTCGGCCGGAATCGCCGGCT
CGACGCACAAGTTCCATCCGTGCGACGAGGCTGTGATAGCCACCAACGAC
GATGCCAGCGATTGCAAGCGATGTGCGGTGCGCTTGGGCTACTGGAAGGA
CGACTACATCGGGTACTTTGTGCGCAACCAAGAGCGCAAGGCGCCGGAGA
TCAATCGCGGCTACTTTGCCCGTGTCAAGGGCGTGGAGATGTGCGTCGAG
AAGTTTCTAAAGAAAACCTCGGGCAACTGCCAGATCATCAATTTGGGCTG
CGGCTTCGACACACTCTACTTCCGGCTGAGGGACACCGCCCACCAGGTGA
AGAACTTCATTGAGCTGGACTTCCCCACGGTCACCGCCCGCAAGTGCTAC
ACAATTAAGCGCAACAAGGCCCTGCTGGCCAGGATTCACGACGAGGATGG
TGAGGTGCGGCTCAGTCCCACGGATCTGCATGGACCAAGCTACCACCTGA
TGGGCGTTGACCTGCGCAACCTCGACGAGGTGGACAGCAAGCTGCAGCAG
GCAGAAGTTGATTACTCCCTGCCCACCATATTTCTCGCCGAGTGCGTTCT
GGTCTATATCGAGGCGCAAAACTGCCGTAACCTGCTCAAATGGATTGCGC
AAAAGTTCCAAGCAGCCGTCTTTGTCAACTACGAACAGGTCAACATGAAC
GACCGTTTCGGCGATGTGATGCTCAACAATCTGCGCGGACGCGGCTGCAG
CCTGGCCGGCGTTGAATCCTGCTTGTCGCTGGATACGCAGAGGAACCGCT
TCAAGGACAGCGGCTGGACTGGCGCCCGCGCCTGGGACATGGTCCAGGTG
TACGAGAGCATCTCGGCGGCCGAGAGGCAGCGAATCGAGCGGCTGGAAAT
GCTGG

BS07782.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-PA 1014 CG3793-RA 1..889 17..905 4445 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:55:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-RB 1738 CG3793-RB 156..1045 16..905 4450 100 Plus
CG3793-RA 1582 CG3793-RA 156..1045 16..905 4450 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:55:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15764781..15765217 261..697 2155 99.5 Plus
2L 23513712 2L 15764375..15764621 16..262 1235 100 Plus
2L 23513712 2L 15765270..15765489 686..905 1100 100 Plus
Blast to na_te.dros performed 2015-02-12 05:55:18
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 520..556 268..304 113 78.4 Plus

BS07782.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:23:41 Download gff for BS07782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-PA 1..889 17..905 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:17:42 Download gff for BS07782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-PA 1..889 17..905 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:59:57 Download gff for BS07782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 150..1045 9..905 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:50:20 Download gff for BS07782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 150..1045 9..905 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:50:20 Download gff for BS07782.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 15764369..15764621 9..262 98 -> Plus
2L 15764783..15765208 263..688 100 -> Plus
2L 15765273..15765489 689..905 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:59:57 Download gff for BS07782.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15764369..15764621 9..262 98 -> Plus
arm_2L 15764783..15765208 263..688 100 -> Plus
arm_2L 15765273..15765489 689..905 100   Plus

BS07782.complete Sequence

1046 bp (1046 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ635985

> BS07782.complete
GAAGTTATCAGTCGACATGGAGCCGCCAGCGTCGGCCGGAATCGCCGGCT
CGACGCACAAGTTCCATCCGTGCGACGAGGCTGTGATAGCCACCAACGAC
GATGCCAGCGATTGCAAGCGATGTGCGGTGCGCTTGGGCTACTGGAAGGA
CGACTACATCGGGTACTTTGTGCGCAACCAAGAGCGCAAGGCGCCGGAGA
TCAATCGCGGCTACTTTGCCCGTGTCAAGGGCGTGGAGATGTGCGTCGAG
AAGTTTCTAAAGAAAACCTCGGGCAACTGCCAGATCATCAATTTGGGCTG
CGGCTTCGACACACTCTACTTCCGGCTGAGGGACACCGCCCACCAGGTGA
AGAACTTCATTGAGCTGGACTTCCCCACGGTCACCGCCCGCAAGTGCTAC
ACAATTAAGCGCAACAAGGCCCTGCTGGCCAGGATTCACGACGAGGATGG
TGAGGTGCGGCTCAGTCCCACGGATCTGCATGGACCAAGCTACCACCTGA
TGGGCGTTGACCTGCGCAACCTCGACGAGGTGGACAGCAAGCTGCAGCAG
GCAGAAGTTGATTACTCCCTGCCCACCATATTTCTCGCCGAGTGCGTTCT
GGTCTATATCGAGGCGCAAAACTGCCGTAACCTGCTCAAATGGATTGCGC
AAAAGTTCCAAGCAGCCGTCTTTGTCAACTACGAACAGGTCAACATGAAC
GACCGTTTCGGCGATGTGATGCTCAACAATCTGCGCGGACGCGGCTGCAG
CCTGGCCGGCGTTGAATCCTGCTTGTCGCTGGATACGCAGAGGAACCGCT
TCAAGGACAGCGGCTGGACTGGCGCCCGCGCCTGGGACATGGTCCAGGTG
TACGAGAGCATCTCGGCGGCCGAGAGGCAGCGAATCGAGCGGCTGGAAAT
GCTGGACGAGGGTGAACTGCTGCTCCAGCTTTTCCAGCACTACTGCCTGG
TGGTCGCCTGGCTGGGCGTGGCCTTTCAGGATATAGATATCACCGTCGAA
GAGTTAATGTCCTCGCTGAACATTGACTAGAAGCTTTCTAGACCAT

BS07782.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:29:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-RA 1014 CG3793-PA 1..1014 17..1030 5070 100 Plus
CG3793-RB 1026 CG3793-PB 1..1026 17..1030 4915 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:29:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-RA 1582 CG3793-RA 156..1170 16..1030 5075 100 Plus
CG3793-RB 1738 CG3793-RB 156..1182 16..1030 4920 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15764781..15765217 261..697 2155 99.5 Plus
2L 23513712 2L 15765270..15765577 686..993 1540 100 Plus
2L 23513712 2L 15764375..15764621 16..262 1235 100 Plus
2L 23513712 2L 15765675..15765711 994..1030 185 100 Plus
Blast to na_te.dros performed 2014-11-27 13:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 520..556 268..304 113 78.4 Plus

BS07782.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:13:09 Download gff for BS07782.complete
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 1..1014 17..1030 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:53:05 Download gff for BS07782.complete
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 140..1163 9..1033 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:51:12 Download gff for BS07782.complete
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 157..1170 17..1030 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:13:09 Download gff for BS07782.complete
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 140..1163 9..1033 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:38 Download gff for BS07782.complete
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 157..1170 17..1030 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:38 Download gff for BS07782.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15764376..15764621 17..262 100 -> Plus
2L 15764783..15765208 263..688 100 -> Plus
2L 15765273..15765577 689..993 100 -> Plus
2L 15765675..15765711 994..1030 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:51:12 Download gff for BS07782.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15764376..15764621 17..262 100 -> Plus
arm_2L 15764783..15765208 263..688 100 -> Plus
arm_2L 15765273..15765577 689..993 100 -> Plus
arm_2L 15765675..15765711 994..1030 100   Plus

BS07782.pep Sequence

Translation from 16 to 1029

> BS07782.pep
MEPPASAGIAGSTHKFHPCDEAVIATNDDASDCKRCAVRLGYWKDDYIGY
FVRNQERKAPEINRGYFARVKGVEMCVEKFLKKTSGNCQIINLGCGFDTL
YFRLRDTAHQVKNFIELDFPTVTARKCYTIKRNKALLARIHDEDGEVRLS
PTDLHGPSYHLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEA
QNCRNLLKWIAQKFQAAVFVNYEQVNMNDRFGDVMLNNLRGRGCSLAGVE
SCLSLDTQRNRFKDSGWTGARAWDMVQVYESISAAERQRIERLEMLDEGE
LLLQLFQHYCLVVAWLGVAFQDIDITVEELMSSLNID*

BS07782.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-PA 337 CG3793-PA 1..337 1..337 1783 100 Plus
CG3793-PB 341 CG3793-PB 1..341 1..337 1768 98.8 Plus