Clone Sequence Records
BS07791.3prime Sequence
951 bp (811 high quality bases) assembled on 2006-01-06
> BS07791.3prime
ATGGTCTAGAAAGCTTCTACTGACCCATCGCTCCGCGCATGAACAGATTC
TTGACGGGCGGCAAGTTCTGGGTCAGCTGCAGACCCAAGCTGCGCAGCAA
GACCACCGGACTGAACTGCGTGGCGTAGAGCGTGTGCAGTCCATGCACGC
CCAGCATAATGGGCACGTTCTTCGCCAGACACTTGCGCTCGTATTTGATG
AGATGCTGCTTGTCGCCGAGCTTGAAACCGGCGTATGCACCGGCGGCCAG
CGATTCCACCAGATACCGCACATCGCTGAAGCCCAGATTGACGCCCTGGC
CGGCGAGCGGATGCACTCGATGGGCGGCATCACCGACCAGAGCTGCTCCA
TTGCACACGTACGACGAGGCGTGCAGGAAACCCAATGGAAACGTGGCACG
CGACTTGTCCAGCACGCCGCACACCCGTGGCGGATATTGCACCTGGTGCT
GGCTGCCGTTGTGTCCAAACAAGGAGTTCAGCGCCTGGACAGCCTTGTCT
GCGAGCTCAACGCGCGGATACTGCCGGCAGAAGGCTTCGTTGAGGGCGTC
TACGAATTCTGTGGGTGGTAGGGCTTGCAGCATTTTCGCTTGCTCGTTGG
TGGTGCTCCAGACCAGGGAGCTCAGCCTGTCCGTTAGTGGTAGCAGTGCC
ACTGGTCCATTGGGCAGAAACCTCTGCCACGCCACGGAATTATCACAGGC
ATCTTCGCCGAGTTCCAGCGTAGCCACCAGGCCCATGCGGTCGTAGTTCA
GGGAAAATACATCCACGTTCATCTCCTTTCTGACCACGGAATTGGCGCCA
TCCGCTCCGATCAGCAAATCGCAGGAAAAGTTGCGTCCATCCTCTAGCTG
CAGCTCGGAGTGATTGGAGTTGGAGTCCCTGGGCAGGCGAACGCACTGGA
TTCTGGCCTTGTTGAGGATCTCCACATTGGGTGATTTTTTGGCCAGCGCA
T
BS07791.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-PA | 1434 | CG7277-RA | 500..1434 | 951..17 | 4625 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:00:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-RA | 1604 | CG7277-RA | 576..1512 | 951..15 | 4655 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:00:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5530712..5531648 | 15..951 | 4655 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:00:20 has no hits.
BS07791.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:23:53 Download gff for
BS07791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-PA | 500..1434 | 17..951 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:17:58 Download gff for
BS07791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-PA | 500..1434 | 17..951 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 03:51:14 Download gff for
BS07791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 576..1512 | 15..951 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:39:22 Download gff for
BS07791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 576..1512 | 15..951 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:39:22 Download gff for
BS07791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5530712..5531648 | 15..951 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 03:51:14 Download gff for
BS07791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5530712..5531648 | 15..951 | 99 | | Plus |
BS07791.5prime Sequence
872 bp (787 high quality bases) assembled on 2006-01-06
> BS07791.5prime
GAAGTTATCAGTCGACATGTTGGGTGTTCTACGTATCCAAGGAGCGTTGG
CTTCGGCGGGGCAGGCGCGTCTTCTGTCCGTCCGCCTGCTGGCCAGCAAA
TCCACCACTGACATGACCACAAACCGCGGTGAATCCACACAATCGACGTC
CACCGAACACTTTGATATAATCATCGGAGGCGGCGGACTGGTGGGCACCA
CATTGGCCGCAGCTCTGGCCAAGAACTCGACGTTGGCGGACAAGAAGGTA
CTGCTGCTGGAAGGTGCGCCCGAGTTCCGGGGATTTAATCCCACTGGGCC
ATACCAGAATCGCGTATCCGCCATCAATCACAACTCCATCGAGCTGTTCA
AGTCCATTGATGCGTGGAAGCACATCGAGTCGGCGCGCTACAAGCCCGTC
AAGCAGATGCAGGTGTGGGAGTCCAACACGGACGCACTGATCCAGTTCCA
GCACGATAACTTTGCCAGCGACGTGGCCTGCATCATTGAGAACGATTTGA
TCCTGGATGCGGTCTATGCGCTGGCCAAGGAATCACCCAATGTGGAGATC
CTCAACAAGGCCAGAATCCAGTGCGTTCGCCTGCCCAGGGACTCCAACTC
CAATCACTCCGAGCTGCAGCTAGAGGATGGACGCAACTTTTCCTGCGATT
TGCTGATCGGAGCGGATGGCGCCAATTCCGTGGTCAGAAAGGAGATGAAC
GTGGATGTATTTTCCCTGAACTACGACCGCATGGGCCTGGTGGCTACGCT
GGAACTCGGCGAAGATGCCTGTGATAATTCCGTGGCGTGGCAGAGGTTTC
TGCCCAATGGACCAGTGGCACTGCTACCACTAACGGACAGGCTGAGCTCC
CTGGTCTGGAGCACCACCAACG
BS07791.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-PA | 1434 | CG7277-RA | 1..856 | 17..872 | 4280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:16:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-RA | 1604 | CG7277-RA | 77..932 | 17..872 | 4280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:16:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5531292..5532147 | 872..17 | 4280 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:16:05 has no hits.
BS07791.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:23:54 Download gff for
BS07791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-PA | 1..856 | 17..872 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:18:00 Download gff for
BS07791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-PA | 1..856 | 17..872 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:05:06 Download gff for
BS07791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 77..932 | 17..872 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:35:13 Download gff for
BS07791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 77..932 | 17..872 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:35:13 Download gff for
BS07791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5531292..5532147 | 17..872 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:05:06 Download gff for
BS07791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5531292..5532147 | 17..872 | 100 | | Minus |
BS07791.complete Sequence
1466 bp (1466 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ635989
> BS07791.complete
GAAGTTATCAGTCGACATGTTGGGTGTTCTACGTATCCAAGGAGCGTTGG
CTTCGGCGGGGCAGGCGCGTCTTCTGTCCGTCCGCCTGCTGGCCAGCAAA
TCCACCACTGACATGACCACAAACCGCGGTGAATCCACACAATCGACGTC
CACCGAACACTTTGATATAATCATCGGAGGCGGCGGACTGGTGGGCACCA
CATTGGCCGCAGCTCTGGCCAAGAACTCGACGTTGGCGGACAAGAAGGTA
CTGCTGCTGGAAGGTGCGCCCGAGTTCCGGGGATTTAATCCCACTGGGCC
ATACCAGAATCGCGTATCCGCCATCAATCACAACTCCATCGAGCTGTTCA
AGTCCATTGATGCGTGGAAGCACATCGAGTCGGCGCGCTACAAGCCCGTC
AAGCAGATGCAGGTGTGGGAGTCCAACACGGACGCACTGATCCAGTTCCA
GCACGATAACTTTGCCAGCGACGTGGCCTGCATCATTGAGAACGATTTGA
TCCTGGATGCGGTCTATGCGCTGGCCAAGGAATCACCCAATGTGGAGATC
CTCAACAAGGCCAGAATCCAGTGCGTTCGCCTGCCCAGGGACTCCAACTC
CAATCACTCCGAGCTGCAGCTAGAGGATGGACGCAACTTTTCCTGCGATT
TGCTGATCGGAGCGGATGGCGCCAATTCCGTGGTCAGAAAGGAGATGAAC
GTGGATGTATTTTCCCTGAACTACGACCGCATGGGCCTGGTGGCTACGCT
GGAACTCGGCGAAGATGCCTGTGATAATTCCGTGGCGTGGCAGAGGTTTC
TGCCCAATGGACCAGTGGCACTGCTACCACTAACGGACAGGCTGAGCTCC
CTGGTCTGGAGCACCACCAACGAGCAAGCGAAAATGCTGCAAGCCCTACC
ACCCACAGAATTCGTAGACGCCCTCAACGAAGCCTTCTGCCGGCAGTATC
CGCGCGTTGAGCTCGCAGACAAGGCTGTCCAGGCGCTGAACTCCTTGTTT
GGACACAACGGCAGCCAGCACCAGGTGCAATATCCGCCACGGGTGTGCGG
CGTGCTGGACAAGTCGCGTGCCACGTTTCCATTGGGTTTCCTGCACGCCT
CGTCGTACGTGTGCAATGGAGCAGCTCTGGTCGGTGATGCCGCCCATCGA
GTGCATCCGCTCGCCGGCCAGGGCGTCAATCTGGGCTTCAGCGATGTGCG
GTATCTGGTGGAATCGCTGGCCGCCGGTGCATACGCCGGTTTCAAGCTCG
GCGACAAGCAGCATCTCATCAAATACGAGCGCAAGTGTCTGGCGAAGAAC
GTGCCCATTATGCTGGGCGTGCATGGACTGCACACGCTCTACGCCACGCA
GTTCAGTCCGGTGGTCTTGCTGCGCAGCTTGGGTCTGCAGCTGACCCAGA
ACTTGCCGCCCGTCAAGAATCTGTTCATGCGCGGAGCGATGGGTCAGTAG
AAGCTTTCTAGACCAT
BS07791.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-RA | 1434 | CG7277-PA | 1..1434 | 17..1450 | 7170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-RA | 1604 | CG7277-RA | 77..1512 | 17..1452 | 7180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:25:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5530712..5532147 | 1452..17 | 7180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:25:11 has no hits.
BS07791.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:06:13 Download gff for
BS07791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 1..1434 | 17..1450 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:44:59 Download gff for
BS07791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 49..1484 | 17..1452 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:50:35 Download gff for
BS07791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 82..1510 | 22..1450 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:06:13 Download gff for
BS07791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 49..1484 | 17..1452 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:18:03 Download gff for
BS07791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 82..1510 | 22..1450 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:18:03 Download gff for
BS07791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5530714..5532142 | 22..1450 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:50:35 Download gff for
BS07791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5530714..5532142 | 22..1450 | 100 | | Minus |
BS07791.pep Sequence
Translation from 16 to 1449
> BS07791.pep
MLGVLRIQGALASAGQARLLSVRLLASKSTTDMTTNRGESTQSTSTEHFD
IIIGGGGLVGTTLAAALAKNSTLADKKVLLLEGAPEFRGFNPTGPYQNRV
SAINHNSIELFKSIDAWKHIESARYKPVKQMQVWESNTDALIQFQHDNFA
SDVACIIENDLILDAVYALAKESPNVEILNKARIQCVRLPRDSNSNHSEL
QLEDGRNFSCDLLIGADGANSVVRKEMNVDVFSLNYDRMGLVATLELGED
ACDNSVAWQRFLPNGPVALLPLTDRLSSLVWSTTNEQAKMLQALPPTEFV
DALNEAFCRQYPRVELADKAVQALNSLFGHNGSQHQVQYPPRVCGVLDKS
RATFPLGFLHASSYVCNGAALVGDAAHRVHPLAGQGVNLGFSDVRYLVES
LAAGAYAGFKLGDKQHLIKYERKCLAKNVPIMLGVHGLHTLYATQFSPVV
LLRSLGLQLTQNLPPVKNLFMRGAMGQ*
BS07791.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-PA | 477 | CG7277-PA | 1..477 | 1..477 | 2450 | 100 | Plus |
