Clone Sequence Records
BS07809.3prime Sequence
609 bp (608 high quality bases) assembled on 2006-01-06
> BS07809.3prime
ATGGTCTAGAAAGCTTTCACCCCTCGGGAACAACGGGCTGCAAATTGAAA
ATACCAAGGCGTAAAAAACAGGACAACAAAATGGGGAACCTGGAGACAAG
GAACAAACGGAATGCAAATGACGCAAAAATGGAAATGGATGGAAATTGAA
AACCTGAGGGCAACGTGTCAAGGGGGGCGGGGGCAAAATGAAAAATAATT
AGCGCAATTAATGACCACGTAATTAGCGCTTCGAATCTATCCTTCTCTGT
GCGCTCTACATCTTGCCATCCCTTTCTCCCACAATGTGTGCAGTGGCACG
TAAAGTGTAACCCACACCCACCATTTTCCGCCCACTTTCCCCGCGGAATT
CGCAGCAAGTCCCCCCGCACCATCGCCTTCATTAATAGTTCGCTGTGGCT
ACGTTTGATAACTCTATCGCGGTCCGGTTGCCACTGATTTTCCTTTTTCC
CACTTTTCCGACTTTTCCATTTGCCAACAGAGTGCCAGCGCAAAAGCGAG
AGAGATTGTGAGCAGGAGTGAGGCAGAGGAGCAGGAGAAAAGTGGAGAGC
AGATCCCAACGACACGCTAATGAATGCACGATGGCCCCGTTTCATGTCGA
CTGATAACT
BS07809.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32509-PA | 579 | CG32509-RA | 1..579 | 595..17 | 2895 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-01-30 14:27:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 14:26:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20893792..20894372 | 15..595 | 2905 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 14:27:00 has no hits.
BS07809.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:19 Download gff for
BS07809.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32509-PA | 1..579 | 17..595 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:18:35 Download gff for
BS07809.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32509-PA | 1..579 | 17..595 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:34:43 Download gff for
BS07809.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20893792..20894372 | 15..595 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:34:43 Download gff for
BS07809.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20893792..20894372 | 15..595 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:03:18 Download gff for
BS07809.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20764819..20765399 | 15..595 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:03:18 Download gff for
BS07809.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20764819..20765399 | 15..595 | 100 | | Plus |
BS07809.5prime Sequence
609 bp (608 high quality bases) assembled on 2006-01-06
> BS07809.5prime
GAAGTTATCAGTCGACATGAAACGGGGCCATCGTGCATTCATTAGCGTGT
CGTTGGGATCTGCTCTCCACTTTTCTCCTGCTCCTCTGCCTCACTCCTGC
TCACAATCTCTCTCGCTTTTGCGCTGGCACTCTGTTGGCAAATGGAAAAG
TCGGAAAAGTGGGAAAAAGGAAAATCAGTGGCAACCGGACCGCGATAGAG
TTATCAAACGTAGCCACAGCGAACTATTAATGAAGGCGATGGTGCGGGGG
GACTTGCTGCGAATTCCGCGGGGAAAGTGGGCGGAAAATGGTGGGTGTGG
GTTACACTTTACGTGCCACTGCACACATTGTGGGAGAAAGGGATGGCAAG
ATGTAGAGCGCACAGAGAAGGATAGATTCGAAGCGCTAATTACGTGGTCA
TTAATTGCGCTAATTATTTTTCATTTTGCCCCCGCCCCCCTTGACACGTT
GCCCTCAGGTTTTCAATTTCCATCCATTTCCATTTTTGCGTCATTTGCAT
TCCGTTTGTTCCTTGTCTCCAGGTTCCCCATTTTGTTGTCCTGTTTTTTA
CGCCTTGGTATTTTCAATTTGCAGCCCGTTGTTCCCGAGGGGTGAAAGCT
TTCTAGACC
BS07809.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32509-PA | 579 | CG32509-RA | 1..579 | 17..595 | 2895 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 04:59:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:59:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20893792..20894372 | 597..17 | 2905 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:59:56 has no hits.
BS07809.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:20 Download gff for
BS07809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32509-PA | 1..579 | 17..595 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:18:36 Download gff for
BS07809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32509-PA | 1..579 | 17..595 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:15:52 Download gff for
BS07809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20893792..20894372 | 17..597 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:15:52 Download gff for
BS07809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20893792..20894372 | 17..597 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:27:36 Download gff for
BS07809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20764819..20765399 | 17..597 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:27:36 Download gff for
BS07809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20764819..20765399 | 17..597 | 100 | | Minus |
BS07809.complete Sequence
611 bp (611 high quality bases) assembled on 2006-01-10
> BS07809.complete
GAAGTTATCAGTCGACATGAAACGGGGCCATCGTGCATTCATTAGCGTGT
CGTTGGGATCTGCTCTCCACTTTTCTCCTGCTCCTCTGCCTCACTCCTGC
TCACAATCTCTCTCGCTTTTGCGCTGGCACTCTGTTGGCAAATGGAAAAG
TCGGAAAAGTGGGAAAAAGGAAAATCAGTGGCAACCGGACCGCGATAGAG
TTATCAAACGTAGCCACAGCGAACTATTAATGAAGGCGATGGTGCGGGGG
GACTTGCTGCGAATTCCGCGGGGAAAGTGGGCGGAAAATGGTGGGTGTGG
GTTACACTTTACGTGCCACTGCACACATTGTGGGAGAAAGGGATGGCAAG
ATGTAGAGCGCACAGAGAAGGATAGATTCGAAGCGCTAATTACGTGGTCA
TTAATTGCGCTAATTATTTTTCATTTTGCCCCCGCCCCCCTTGACACGTT
GCCCTCAGGTTTTCAATTTCCATCCATTTCCATTTTTGCGTCATTTGCAT
TCCGTTTGTTCCTTGTCTCCAGGTTCCCCATTTTGTTGTCCTGTTTTTTA
CGCCTTGGTATTTTCAATTTGCAGCCCGTTGTTCCCGAGGGGTGAAAGCT
TTCTAGACCAT
BS07809.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 14:57:49 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 14:57:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:57:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20893792..20894372 | 597..17 | 2905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:57:49 has no hits.
BS07809.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-22 00:48:47 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-22 00:48:47 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:56:50 Download gff for
BS07809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20893795..20894372 | 17..594 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:56:50 Download gff for
BS07809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20893795..20894372 | 17..594 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:35:22 Download gff for
BS07809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20764822..20765399 | 17..594 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:35:22 Download gff for
BS07809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20764822..20765399 | 17..594 | 100 | | Minus |
BS07809.pep Sequence
Translation from 16 to 594
> BS07809.pep
MKRGHRAFISVSLGSALHFSPAPLPHSCSQSLSLLRWHSVGKWKSRKSGK
KENQWQPDRDRVIKRSHSELLMKAMVRGDLLRIPRGKWAENGGCGLHFTC
HCTHCGRKGWQDVERTEKDRFEALITWSLIALIIFHFAPAPLDTLPSGFQ
FPSISIFASFAFRLFLVSRFPILLSCFLRLGIFNLQPVVPEG*
Sequence BS07809.pep has no blast hits.