Clone BS07811 Report

Search the DGRC for BS07811

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:78
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG33692-RA
Protein status:BS07811.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07811.3prime Sequence

814 bp (781 high quality bases) assembled on 2006-01-06

> BS07811.3prime
ATGGTCTAGAAAGCTTTCAGAAGGCCGCATCGCCAGCATACCATGGATGC
ACCCACGGCGCCGATGGCGGCGGAGTGGGTGGATATATGGTGGGCGATGG
CTGACCATGTGTATGATGGGCCGCCGCTGCTGCCGCCGCTGCCGCTGCTG
CTGCAGCATGATGATGTGCCGCCGCAGCAGCCGCTGCCGCATGATGATGA
TGATGGTGCTGATATGGTGCCGTAAATGCCGCCGCCGCCGCTGCCGCCGC
ACTGCCGTAGTAGGATGCGGCGGCCAGGGCAGCTGCCGCCGCCGTTGTTG
GCGAAGCCGTCGATGAGGAGTGCGTCGAGGAAGCTGGCGACAGGCTGGCC
AGTCCAGCGGCACACACGCTATGCCGGCGATGCATTATATGCCGTTGGGG
TGGCGCCGCCACTGCCGCTGCAGCCGCCGGTTGCTGCTGCTGCTGCTGCG
TTTGCTGCTGCTGATGCGGATGCTGCTGCGGTTGGTGGGGCGGCGTTGGT
GCTGCCGCCTGTGTCCTTCGCTGCCTCTGCTGTTCCCACTCGGGCATGAC
ATTGCCCATGGGTGGACTTAGCATGCTGGCCGCCGCCTTGCCATACAAAT
TCGATAGATAGGCGTGCTCTACTTCGGCCATTTTCTGAGCGGCAGCCGCA
GCAGCGCGCGGATTCTTTGCCGCCGTCTGCTCGGCATGCTGGCGCTTCTT
TAGCAAACGCTGCTGCTCGTGCTGCTGCTGATGGTGGTGCTGCTGGGCTG
CTGGATGGTGCGGGTGCGGGTGTGGGTGTGGGTTTGTGGGAGTACAACAT
GTCGACTGATAACT

BS07811.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG33692-PA 783 CG33692-RA 16..783 784..17 3840 100 Minus
CG33692-PB 783 CG33692-RB 16..783 784..17 3840 100 Minus
CG33692-PC 783 CG33692-RC 16..783 784..17 3840 100 Minus
CG4013-PA 10815 Smr-RA 7231..7277 463..417 135 91.4 Minus
CG4013-PB 10815 Smr-RB 7231..7277 463..417 135 91.4 Minus
CG4013-PC 10815 Smr-RC 7231..7277 463..417 135 91.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:42:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG43736-RL 7668 CG43736-RL 5156..5942 804..17 3900 99.7 Minus
CG43736-RI 7387 CG43736-RI 4875..5661 804..17 3900 99.7 Minus
CG43736-RG 5533 CG43736-RG 3021..3807 804..17 3900 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:42:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6879068..6879854 804..17 3875 99.7 Minus
X 23542271 X 12691034..12691093 417..476 195 88.3 Plus
Blast to na_te.dros performed on 2015-02-12 00:42:09 has no hits.

BS07811.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:24 Download gff for BS07811.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32737-PE 1..783 17..800 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:18:40 Download gff for BS07811.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33692-PC 1..783 17..800 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:46:10 Download gff for BS07811.3prime
Subject Subject Range Query Range Percent Splice Strand
CG43736-RF 3299..4091 13..808 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:12:01 Download gff for BS07811.3prime
Subject Subject Range Query Range Percent Splice Strand
CG43736-RG 3017..3809 13..808 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:12:01 Download gff for BS07811.3prime
Subject Subject Range Query Range Percent Splice Strand
X 6879064..6879856 13..808 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:46:10 Download gff for BS07811.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6773097..6773889 13..808 99   Minus

BS07811.5prime Sequence

813 bp (788 high quality bases) assembled on 2006-01-06

> BS07811.5prime
GAAGTTATCAGTCGACATGTTGTACTCCCACAACCCACACCCACACCCGC
ACCCGCACCATCCAGCAGCCCAGCAGCACCACCATCAGCAGCAGCACGAG
CAGCAGCGTTTGCTAAAGAAGCGCCAGCATGCCGAGCAGACGGCGGCAAA
GAATCCGCGCGCTGCTGCGGCTGCCGCTCAGAAAATGGCCGAAGTAGAGC
ACGCCTATCTATCGAATTTGTATGGCAAGGCGGCGGCCAGCATGCTAAGT
CCACCCATGGGCAATGTCATGCCCGAGTGGGAACAGCAGAGGCAGCGAAG
GACACAGGCGGCAGCACCAACGCCGCCCCACCAACCGCAGCAGCATCCGC
ATCAGCAGCAGCAAACGCAGCAGCAGCAGCAGCAACCGGCGGCTGCAGCG
GCAGTGGCGGCGCCACCCCAACGGCATATAATGCATCGCCGGCATAGCGT
GTGTGCCGCTGGACTGGCCAGCCTGTCGCCAGCTTCCTCGACGCACTCCT
CATCGACGGCTTCGCCAACAACGGCGGCGGCAGCTGCCCTGGCCGCCGCA
TCCTACTACGGCAGTGCGGCGGCAGCGGCGGCGGCGGCATTTACGGCACC
ATATCAGCACCATCATCATCATCATGCGGCAGCGGCTGCTGCGGCGGCAC
ATCATCATGCTGCAGCAGCAGCGGCAGCGGCGGCAGCAGCGGCGGCCCAT
CATACACATGGTCAGCCATCGCCCACCATATATCCACCCACTCCGCCGCC
ATCGGCGCCGTGGGTGCATCCATGGTATGCTGGCGATGCGGCCTTCTGAA
AGCTTTCTAGACC

BS07811.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG33692-PA 783 CG33692-RA 1..783 17..799 3915 100 Plus
CG33692-PB 783 CG33692-RB 1..783 17..799 3915 100 Plus
CG33692-PC 783 CG33692-RC 1..783 17..799 3915 100 Plus
CG4013-PA 10815 Smr-RA 7231..7277 353..399 135 91.4 Plus
CG4013-PB 10815 Smr-RB 7231..7277 353..399 135 91.4 Plus
CG4013-PC 10815 Smr-RC 7231..7277 353..399 135 91.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:30:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG43736-RL 7668 CG43736-RL 5156..5942 13..799 3920 99.9 Plus
CG43736-RI 7387 CG43736-RI 4875..5661 13..799 3920 99.9 Plus
CG43736-RG 5533 CG43736-RG 3021..3807 13..799 3920 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:30:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6879068..6879854 13..799 3920 99.9 Plus
X 23542271 X 12691034..12691093 399..340 195 88.3 Minus
Blast to na_te.dros performed on 2015-02-12 00:30:41 has no hits.

BS07811.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:25 Download gff for BS07811.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32737-PE 1..783 17..799 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:18:42 Download gff for BS07811.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33692-PC 1..783 17..799 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 20:00:00 Download gff for BS07811.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43736-RF 3299..4091 9..803 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:00:02 Download gff for BS07811.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43736-RG 3017..3809 9..803 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:00:02 Download gff for BS07811.5prime
Subject Subject Range Query Range Percent Splice Strand
X 6879064..6879856 9..803 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 20:00:00 Download gff for BS07811.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6773097..6773889 9..803 99   Plus

BS07811.complete Sequence

815 bp (815 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ635997

> BS07811.complete
GAAGTTATCAGTCGACATGTTGTACTCCCACAACCCACACCCACACCCGC
ACCCGCACCATCCAGCAGCCCAGCAGCACCACCATCAGCAGCAGCACGAG
CAGCAGCGTTTGCTAAAGAAGCGCCAGCATGCCGAGCAGACGGCGGCAAA
GAATCCGCGCGCTGCTGCGGCTGCCGCTCAGAAAATGGCCGAAGTAGAGC
ACGCCTATCTATCGAATTTGTATGGCAAGGCGGCGGCCAGCATGCTAAGT
CCACCCATGGGCAATGTCATGCCCGAGTGGGAACAGCAGAGGCAGCGAAG
GACACAGGCGGCAGCACCAACGCCGCCCCACCAACCGCAGCAGCATCCGC
ATCAGCAGCAGCAAACGCAGCAGCAGCAGCAGCAACCGGCGGCTGCAGCG
GCAGTGGCGGCGCCACCCCAACGGCATATAATGCATCGCCGGCATAGCGT
GTGTGCCGCTGGACTGGCCAGCCTGTCGCCAGCTTCCTCGACGCACTCCT
CATCGACGGCTTCGCCAACAACGGCGGCGGCAGCTGCCCTGGCCGCCGCA
TCCTACTACGGCAGTGCGGCGGCAGCGGCGGCGGCGGCATTTACGGCACC
ATATCAGCACCATCATCATCATCATGCGGCAGCGGCTGCTGCGGCGGCAC
ATCATCATGCTGCAGCAGCAGCGGCAGCGGCGGCAGCAGCGGCGGCCCAT
CATACACATGGTCAGCCATCGCCCACCATATATCCACCCACTCCGCCGCC
ATCGGCGCCGTGGGTGCATCCATGGTATGCTGGCGATGCGGCCTTCTGAA
AGCTTTCTAGACCAT

BS07811.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:26:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG43736-RG 3432 CG43736-PG 2646..3432 13..799 3920 99.9 Plus
CG43736-RF 3687 CG43736-PF 2901..3687 13..799 3920 99.9 Plus
Smr-RG 10824 CG4013-PG 7227..7286 340..399 195 88.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:26:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG43736-RL 7668 CG43736-RL 5156..5942 13..799 3920 99.9 Plus
CG43736-RI 7387 CG43736-RI 4875..5661 13..799 3920 99.9 Plus
CG43736-RG 5533 CG43736-RG 3021..3807 13..799 3920 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:25:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6879068..6879854 13..799 3920 99.9 Plus
X 23542271 X 12691034..12691093 399..340 195 88.3 Minus
Blast to na_te.dros performed on 2014-11-28 00:26:00 has no hits.

BS07811.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:05:58 Download gff for BS07811.complete
Subject Subject Range Query Range Percent Splice Strand
CG33692-RC 1..783 17..799 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:44:39 Download gff for BS07811.complete
Subject Subject Range Query Range Percent Splice Strand
CG33692-RC 755..1547 9..803 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:52:02 Download gff for BS07811.complete
Subject Subject Range Query Range Percent Splice Strand
CG43736-RF 3312..4088 22..798 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:05:58 Download gff for BS07811.complete
Subject Subject Range Query Range Percent Splice Strand
CG33692-RC 755..1547 9..803 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:20:21 Download gff for BS07811.complete
Subject Subject Range Query Range Percent Splice Strand
CG43736-RG 3030..3806 22..798 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:20:21 Download gff for BS07811.complete
Subject Subject Range Query Range Percent Splice Strand
X 6879077..6879853 22..798 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:52:02 Download gff for BS07811.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6773110..6773886 22..798 100   Plus

BS07811.pep Sequence

Translation from 16 to 798

> BS07811.pep
MLYSHNPHPHPHPHHPAAQQHHHQQQHEQQRLLKKRQHAEQTAAKNPRAA
AAAAQKMAEVEHAYLSNLYGKAAASMLSPPMGNVMPEWEQQRQRRTQAAA
PTPPHQPQQHPHQQQQTQQQQQQPAAAAAVAAPPQRHIMHRRHSVCAAGL
ASLSPASSTHSSSTASPTTAAAAALAAASYYGSAAAAAAAAFTAPYQHHH
HHHAAAAAAAAHHHAAAAAAAAAAAAAHHTHGQPSPTIYPPTPPPSAPWV
HPWYAGDAAF*

BS07811.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG43736-PG 1143 CG43736-PG 884..1143 1..260 1399 100 Plus
CG43736-PF 1228 CG43736-PF 969..1228 1..260 1399 100 Plus
A2bp1-PF 763 CG32062-PF 496..719 9..241 231 36 Plus
A2bp1-PL 858 CG32062-PL 513..736 9..241 231 36 Plus
A2bp1-PE 865 CG32062-PE 496..719 9..241 231 36 Plus