Clone BS07815 Report

Search the DGRC for BS07815

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:78
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG10585-RA
Protein status:BS07815.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07815.3prime Sequence

949 bp (879 high quality bases) assembled on 2006-01-06

> BS07815.3prime
ATGGTCTAGAAAGCTTTCAAAGATCCTGCATGGCCAGAATGATGTTCTCC
AGAGCCTGTCGAGCGTCCGTCGCCGGGAAATGTTGCAGAACGGCCAGGGC
AGCGGCTGTGTGCTTCCGCTGCAGTTCCTTGGTTTTGGCCAAAGCCGGCC
CGGCCAGAATGGCCTTGTGGATCTTGTCGTAGTCGATGTTATCGACCGAC
TGCTTGCCAGCCTCCAATTGAGAATACATGCCAGGGTCGTGCTCCAAGTG
GAATAGGACTGGAGCACTAACCAGACTGAAAGTAACATCTAGCGGCAGTT
GGGGGCACTGAAAAGGTTCGGCATCCAAGCAAGCCTGCCAAGCGAGCGCC
AAATGTTTGCCAAAGCGGTAAGCATGTCGCTGCAGTTCCTCACTCTGTCC
GGCCAGCTTTAGCGAAGCTTGGCAGGATTTGCCCAGCAGGCTACCCGCAT
TAAGGATATTACGGCACTCCCATTCCTCCTCCGGATTGCCGAGAACCTGG
GCAATCGGCATTGGCGTCATCACGTCGTGCTCGTTGAAATCCACTCCAAC
GCTGAGAGATGGTCGCTGGAAGGTTCCTGGCTTATAAGGCAGCGGGTTGT
TCTGTTCATCACGCTCTCCAATGAATTCCGACTCGGAAAAATCTCGCACC
GCCGACGAGATCAGCTCCACCACCTCCTGGTTGCGCAGATTAGCCAGCTC
CGCACTGGAATGGCCCAGAAGATAGTCGCCGGTCAGCAGGCCGATCTTGT
TGCCAAACGACATGTCGTCGTAGGTGTCCACATCCTGCCCAGCCTGCGTG
CTCGATTGCAGATTAACCACGCTATTGTGCACCAGATGAGATATCCGTAT
CATCTCGGTGACCTCGGCCAAAGCCCTTTGGGAGTGCAGCACTCCGGCAC
TCTTGTCCTGCTCCACGTCTGGAACACTGGGTGCATGTCCTGCGGNCTT

BS07815.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-PA 1347 CG10585-RA 415..1347 949..17 4646 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-RB 1699 CG10585-RB 517..1449 949..17 4654 99.9 Minus
CG10585-RA 1990 CG10585-RA 808..1740 949..17 4654 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:37:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21029085..21029891 823..17 4035 100 Minus
3L 28110227 3L 21028780..21028905 949..824 619 99.2 Minus
Blast to na_te.dros performed on 2015-02-12 00:37:24 has no hits.

BS07815.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:33 Download gff for BS07815.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-PA 415..1347 17..949 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:18:51 Download gff for BS07815.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-PA 415..1347 17..949 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:45:32 Download gff for BS07815.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 808..1740 17..949 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:14:22 Download gff for BS07815.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 808..1740 17..949 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:14:22 Download gff for BS07815.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 21028780..21028905 824..949 99 -> Minus
3L 21029085..21029891 17..823 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:45:32 Download gff for BS07815.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21021880..21022005 824..949 99 -> Minus
arm_3L 21022185..21022991 17..823 100   Minus

BS07815.5prime Sequence

897 bp (862 high quality bases) assembled on 2006-01-06

> BS07815.5prime
GAAGTTATCAGTCGACATGGCCATGTACCGCGCCAGTGGGTTAAGGATTA
TGCAACAGATGCGACGCAGGATTCCCGTCGAACTGCAGCCACTCCAAGTG
GCCAAAGCTGCGCCTGCGCTGCAAACTTTCACTTCTCAGCGCTGGACTTC
GACGACGACGACCAGTGGAAAGCATGCCAGTCCACAGGTTACGACCCCGC
CCCCGAGACACGACTGGAATAGGGCGGTCAGCGAGGCGGAGCGCATCGTC
GGCTATCCCACATCCTTCCTCAGTCTGCGCTGGCTGCTCAGCGACGAGAT
CGCCAATGTGGCGCTGCACCTGCGCAAACTGGTGGGCAGCGCCCATCCGC
TGATGAAGACGGCCAAGCACCTGCTCTACAATGGCAAGAACACGATGCAA
GCCTGGGGATTGATAGTGCTCCTGGTGTCCAAGGCCGCAGGACATGCACC
CAGTGTTCCAGACGTGGAGCAGGACAAGAGTGCCGGAGTGCTGCACTCCC
AAAGGGCTTTGGCCGAGGTCACCGAGATGATACGGATATCTCATCTGGTG
CACAATAGCGTGGTTAATCTGCAATCGAGCACGCAGGCTGGGCAGGATGT
GGACACCTACGACGACATGTCGTTTGGCAACAAGATCGGCCTGCTGACCG
GCGACTATCTTCTGGGCCATTCCAGTGCGGAGCTGGCTAATCTGCGCAAC
CAGGAGGTGGTGGAGCTGATCTCGTCGGCGGTGCGAGATTTTTCCGAGTC
GGAATTCATTGGAGAGCGTGATGAACAGAACAACCCGCTGCCTTATAAGC
CAGGAACCTTCCAGCGACCATCTCTCAGCGTTGGAGTGGATTTCAACGAG
CACGACGTGATGACGCCNATGCCGATTGCCCAGGTTTCTCGGCATCC

BS07815.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:55:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-PA 1347 CG10585-RA 1..870 17..886 4331 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:20:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-RB 1699 CG10585-RB 103..979 17..894 4354 99.8 Plus
CG10585-RA 1990 CG10585-RA 394..1270 17..894 4354 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:20:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21028308..21028658 17..367 1755 100 Plus
3L 28110227 3L 21029085..21029414 557..886 1639 99.7 Plus
3L 28110227 3L 21028716..21028905 367..556 950 100 Plus
Blast to na_te.dros performed on 2015-02-13 08:20:06 has no hits.

BS07815.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:34 Download gff for BS07815.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-PA 1..881 17..897 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:18:53 Download gff for BS07815.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-PA 1..881 17..897 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:59:05 Download gff for BS07815.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 394..1274 17..897 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:31:42 Download gff for BS07815.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 394..1274 17..897 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:31:42 Download gff for BS07815.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21028308..21028657 17..366 100 -> Plus
3L 21028716..21028905 367..556 100 -> Plus
3L 21029085..21029425 557..897 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:59:05 Download gff for BS07815.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21021408..21021757 17..366 100 -> Plus
arm_3L 21021816..21022005 367..556 100 -> Plus
arm_3L 21022185..21022525 557..897 99   Plus

BS07815.complete Sequence

1379 bp (1379 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ635999

> BS07815.complete
GAAGTTATCAGTCGACATGGCCATGTACCGCGCCAGTGGGTTAAGGATTA
TGCAACAGATGCGACGCAGGATTCCCGTCGAACTGCAGCCACTCCAAGTG
GCCAAAGCTGCGCCTGCGCTGCAAACTTTCACTTCTCAGCGCTGGACTTC
GACGACGACGACCAGTGGAAAGCATGCCAGTCCACAGGTTACGACCCCGC
CCCCGAGACACGACTGGAATAGGGCGGTCAGCGAGGCGGAGCGCATCGTC
GGCTATCCCACATCCTTCCTCAGTCTGCGCTGGCTGCTCAGCGACGAGAT
CGCCAATGTGGCGCTGCACCTGCGCAAACTGGTGGGCAGCGCCCATCCGC
TGATGAAGACGGCCAAGCACCTGCTCTACAATGGCAAGAACACGATGCAA
GCCTGGGGATTGATAGTGCTCCTGGTGTCCAAGGCCGCAGGACATGCACC
CAGTGTTCCAGACGTGGAGCAGGACAAGAGTGCCGGAGTGCTGCACTCCC
AAAGGGCTTTGGCCGAGGTCACCGAGATGATACGGATATCTCATCTGGTG
CACAATAGCGTGGTTAATCTGCAATCGAGCACGCAGGCTGGGCAGGATGT
GGACACCTACGACGACATGTCGTTTGGCAACAAGATCGGCCTGCTGACCG
GCGACTATCTTCTGGGCCATTCCAGTGCGGAGCTGGCTAATCTGCGCAAC
CAGGAGGTGGTGGAGCTGATCTCGTCGGCGGTGCGAGATTTTTCCGAGTC
GGAATTCATTGGAGAGCGTGATGAACAGAACAACCCGCTGCCTTATAAGC
CAGGAACCTTCCAGCGACCATCTCTCAGCGTTGGAGTGGATTTCAACGAG
CACGACGTGATGACGCCAATGCCGATTGCCCAGGTTCTCGGCAATCCGGA
GGAGGAATGGGAGTGCCGTAATATCCTTAATGCGGGTAGCCTGCTGGGCA
AATCCTGCCAAGCTTCGCTAAAGCTGGCCGGACAGAGTGAGGAACTGCAG
CGACATGCTTACCGCTTTGGCAAACATTTGGCGCTCGCTTGGCAGGCTTG
CTTGGATGCCGAACCTTTTCAGTGCCCCCAACTGCCGCTAGATGTTACTT
TCAGTCTGGTTAGTGCTCCAGTCCTATTCCACTTGGAGCACGACCCTGGC
ATGTATTCTCAATTGGAGGCTGGCAAGCAGTCGGTCGATAACATCGACTA
CGACAAGATCCACAAGGCCATTCTGGCCGGGCCGGCTTTGGCCAAAACCA
AGGAACTGCAGCGGAAGCACACAGCCGCTGCCCTGGCCGTTCTGCAACAT
TTCCCGGCGACGGACGCTCGACAGGCTCTGGAGAACATCATTCTGGCCAT
GCAGGATCTTTGAAAGCTTTCTAGACCAT

BS07815.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-RB 1347 CG10585-PB 1..1347 17..1363 6735 100 Plus
CG10585-RA 1347 CG10585-PA 1..1347 17..1363 6735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-RB 1699 CG10585-RB 103..1449 17..1363 6735 100 Plus
CG10585-RA 1990 CG10585-RA 394..1740 17..1363 6735 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21029085..21029891 557..1363 4035 100 Plus
3L 28110227 3L 21028308..21028658 17..367 1755 100 Plus
3L 28110227 3L 21028716..21028905 367..556 950 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:16:08 has no hits.

BS07815.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:06:01 Download gff for BS07815.complete
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 1..1347 17..1363 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:44:42 Download gff for BS07815.complete
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 414..1760 17..1363 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:10:29 Download gff for BS07815.complete
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 394..1739 17..1362 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:06:01 Download gff for BS07815.complete
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 414..1760 17..1363 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:07:05 Download gff for BS07815.complete
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 394..1739 17..1362 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:07:05 Download gff for BS07815.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21028308..21028657 17..366 100 -> Plus
3L 21028716..21028905 367..556 100 -> Plus
3L 21029085..21029890 557..1362 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:10:29 Download gff for BS07815.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21021408..21021757 17..366 100 -> Plus
arm_3L 21021816..21022005 367..556 100 -> Plus
arm_3L 21022185..21022990 557..1362 100   Plus

BS07815.pep Sequence

Translation from 16 to 1362

> BS07815.pep
MAMYRASGLRIMQQMRRRIPVELQPLQVAKAAPALQTFTSQRWTSTTTTS
GKHASPQVTTPPPRHDWNRAVSEAERIVGYPTSFLSLRWLLSDEIANVAL
HLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPDV
EQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD
MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGE
RDEQNNPLPYKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWEC
RNILNAGSLLGKSCQASLKLAGQSEELQRHAYRFGKHLALAWQACLDAEP
FQCPQLPLDVTFSLVSAPVLFHLEHDPGMYSQLEAGKQSVDNIDYDKIHK
AILAGPALAKTKELQRKHTAAALAVLQHFPATDARQALENIILAMQDL*

BS07815.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:40:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-PB 448 CG10585-PB 1..448 1..448 2306 100 Plus
CG10585-PA 448 CG10585-PA 1..448 1..448 2306 100 Plus