Clone BS07821 Report

Search the DGRC for BS07821

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:78
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCyp4ae1-RA
Protein status:BS07821.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07821.3prime Sequence

949 bp (872 high quality bases) assembled on 2006-01-06

> BS07821.3prime
ATGGTCTAGAAAGCTTTCAATACAACCGCGGCCGCAGCCCAACATTTACC
CCGCTCTTGGAGCGCAGCACTATTTTAATGGATGGCTCCACATCGGCTCC
CATTGGAAGCAGCTGGTAGTGGCGTATCACTTTGGTCACCATGGTTTTCA
TCTCCAGCAGAGCAAACTTTTGACCAATGCAGTTCCTCGGCCCAGCGGAG
AAAGGTATGTAGCTGTAGGGACTCAGTCTGGGTGCCTCTTCTCCTAGATG
CCTCTCCGGCTGGAAGACCAGTGGATCGGTGAAGATCGCTTCATCCCGGA
GGAGCTGCCAGAGAAGTACGACCACGTTGGTTCCCACAGGGATGTAGCCC
TCATCTATAACCAAATCCTTTTCCAGGCAGCGTGCGACGGCCGGAATAGG
CGGATAAAGACGCAGGGACTCTTTGACCACGCAGCTTAGATACGGTAACG
TCGCGAAATCCGAGAGAATAACGCCTCTGAATAAATCCTGGCCGTAGTGC
ATCCTCAGTTCCTCAAAAAGCTTTTGTTGCACTGCCTCATGGCGGGAAAG
CAGATACAAACAGAAGGAAACCGCTGAAGTCGTCGTATCGTGACCCTCAA
AGATGAAAGTGTTCACTTCATCGCGAATTTGCTTGTCAGTCAATGGTTGC
CCATCCACAGTTGCCCGCAGGAGCGTGTCCAGCAGGGCGTGGGGCTTTGT
TGGCTTATCTTGATTAGCCTCCCTGGCCAGTAAACGGCGTCGCTGCTCTA
TAATTCCGTTGGTAAACTCATGGAGGCAGATGACTCCTGCCTGTTGCTTT
CTGAATCCGCTGGGCCAGCACAGGCGAAAGAGGTGGGGAAAGAGGAGATG
CGGCCTCATGAACCTGGTGGCCAAGATGTTGGTTAGATCTTTTACAGCGT
GCACCACCTCAGAGTCAGCTCCTTGAGCGTCCACGTTCACGCCCATAGC

BS07821.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:56:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG10755-PA 1491 Cyp4ae1-RA 559..1491 949..17 4665 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:06:44
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ae1-RA 1822 CG10755-RA 649..1583 949..15 4675 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2179826..2180363 887..350 2675 99.8 Minus
X 23542271 X 2180418..2180759 356..15 1710 100 Minus
X 23542271 X 2179709..2179770 949..888 310 100 Minus
Blast to na_te.dros performed on 2015-02-11 10:06:42 has no hits.

BS07821.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:44 Download gff for BS07821.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10755-PA 559..1491 17..949 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:19:05 Download gff for BS07821.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10755-PA 559..1491 17..949 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:03:12 Download gff for BS07821.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 649..1583 15..949 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:07:00 Download gff for BS07821.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 649..1583 15..949 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:07:00 Download gff for BS07821.3prime
Subject Subject Range Query Range Percent Splice Strand
X 2179709..2179770 888..949 100 -> Minus
X 2179826..2180358 355..887 100 -> Minus
X 2180420..2180759 15..354 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:03:12 Download gff for BS07821.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2073742..2073803 888..949 100 -> Minus
arm_X 2073859..2074391 355..887 100 -> Minus
arm_X 2074453..2074792 15..354 100   Minus

BS07821.5prime Sequence

924 bp (885 high quality bases) assembled on 2006-01-06

> BS07821.5prime
GAAGTTATCAGTCGACATGTTGGTGGTTTTGTTGGTGGCCCTCCTGGTGA
CTCGCCTAGTGGCCTCGCTGTTCCGTTTGGCGCTAAAGGAGCTTCGACAT
CCTTTGCAAGGCGTTGTGCCAAGTGTTTCGAGAGTTCCTCTACTAGGAGC
CGCCTGGCAGATGCGGAGTTTTCAGCCAGACAACTTGCATGATAAGTTCG
CCGAGTATGTTAAGCGTTTTGGTCGCAGTTTCATGGGCACTGTCTTAGGC
CATGTGGTTATGGTTACAGCGGAGCCCCGACATATCGATGCACTGCTGCA
GGGTCAGCATCAGTTGAAGAAGGGCACGATGTACTTTGCCTTACGCGGTT
GGCTGGGCGATGGACTGCTGCTGAGTCGTGGAAAGGAGTGGCACACGATG
CGCAAAATCATCACGCCCACGTTTCACTTTAGCATCCTGGAGCAGTTTGT
CGAGGTCTTCGATAGGCAGAGCAGCATATTAGTGGAGCGTTTGAGAACGC
TGTCGTACGGCAACGAGGTCGTGAACATCTATCCCTTGGTGGGCTTGGCT
GCCCTAGACATAATCACCGAAACTGCTATGGGCGTGAACGTGGACGCTCA
AGGAGCTGACTCTGAGGTGGTGCACGCTGTAAAAGATCTAACCAACATCT
TGGCCACCAGGTTCATGAGGCCGCATCTCCTCTTTCCCCACCTCTTTCGC
CTGTGCTGGCCCAGCGGATTCAGAAAGCAACAGGCAGGAGTCATCTGCCT
CCATGAGTTTACCAACGGAATTATAGAGCAGCGACGCCGTTTACTGGCCA
GGGAGGCTAATCAAGATAAGCCAACAAAGCCCCACGCCCTGCTGGACACG
CTCCTGCGGGCAACTGTGGATGGGCAACCATTGACTGANCAGCAAATTCG
CGATGAAGTGAACACTTTCATCTT

BS07821.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG10755-PA 1491 Cyp4ae1-RA 1..908 17..924 4496 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:29:15
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ae1-RA 1822 CG10755-RA 89..998 15..924 4524 99.8 Plus
Cyp4d8-RA 1573 CG4321-RA 319..432 350..463 215 82.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:29:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2179317..2179770 183..636 2270 100 Plus
X 23542271 X 2179826..2180113 637..924 1414 99.3 Plus
X 23542271 X 2179095..2179262 15..182 840 100 Plus
3L 28110227 3L 7494829..7494942 463..350 195 78.1 Minus
Blast to na_te.dros performed on 2015-02-12 04:29:14 has no hits.

BS07821.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:45 Download gff for BS07821.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10755-PA 1..908 17..924 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:19:07 Download gff for BS07821.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10755-PA 1..908 17..924 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:05:18 Download gff for BS07821.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 86..998 12..924 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:09:31 Download gff for BS07821.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 86..998 12..924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:09:31 Download gff for BS07821.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2179092..2179262 12..182 99 -> Plus
X 2179317..2179770 183..636 100 -> Plus
X 2179826..2180113 637..924 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:05:18 Download gff for BS07821.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2073125..2073295 12..182 99 -> Plus
arm_X 2073350..2073803 183..636 100 -> Plus
arm_X 2073859..2074146 637..924 99   Plus

BS07821.complete Sequence

1523 bp (1523 high quality bases) assembled on 2006-01-10

> BS07821.complete
GAAGTTATCAGTCGACATGTTGGTGGTTTTGTTGGTGGCCCTCCTGGTGA
CTCGCCTAGTGGCCTCGCTGTTCCGTTTGGCGCTAAAGGAGCTTCGACAT
CCTTTGCAAGGCGTTGTGCCAAGTGTTTCGAGAGTTCCTCTACTAGGAGC
CGCCTGGCAGATGCGGAGTTTTCAGCCAGACAACTTGCATGATAAGTTCG
CCGAGTATGTTAAGCGTTTTGGTCGCAGTTTCATGGGCACTGTCTTAGGC
CATGTGGTTATGGTTACAGCGGAGCCCCGACATATCGATGCACTGCTGCA
GGGTCAGCATCAGTTGAAGAAGGGCACGATGTACTTTGCCTTACGCGGTT
GGCTGGGCGATGGACTGCTGCTGAGTCGTGGAAAGGAGTGGCACACGATG
CGCAAAATCATCACGCCCACGTTTCACTTTAGCATCCTGGAGCAGTTTGT
CGAGGTCTTCGATAGGCAGAGCAGCATATTAGTGGAGCGTTTGAGAACGC
TGTCGTACGGCAACGAGGTCGTGAACATCTATCCCTTGGTGGGCTTGGCT
GCCCTAGACATAATCACCGAAACTGCTATGGGCGTGAACGTGGACGCTCA
AGGAGCTGACTCTGAGGTGGTGCACGCTGTAAAAGATCTAACCAACATCT
TGGCCACCAGGTTCATGAGGCCGCATCTCCTCTTTCCCCACCTCTTTCGC
CTGTGCTGGCCCAGCGGATTCAGAAAGCAACAGGCAGGAGTCATCTGCCT
CCATGAGTTTACCAACGGAATTATAGAGCAGCGACGCCGTTTACTGGCCA
GGGAGGCTAATCAAGATAAGCCAACAAAGCCCCACGCCCTGCTGGACACG
CTCCTGCGGGCAACTGTGGATGGGCAACCATTGACTGACAAGCAAATTCG
CGATGAAGTGAACACTTTCATCTTTGAGGGTCACGATACGACGACTTCAG
CGGTTTCCTTCTGTTTGTATCTGCTTTCCCGCCATGAGGCAGTGCAACAA
AAGCTTTTTGAGGAACTGAGGATGCACTACGGCCAGGATTTATTCAGAGG
CGTTATTCTCTCGGATTTCGCGACGTTACCGTATCTAAGCTGCGTGGTCA
AAGAGTCCCTGCGTCTTTATCCGCCTATTCCGGCCGTCGCACGCTGCCTG
GAAAAGGATTTGGTTATAGATGAGGGCTACATCCCTGTGGGAACCAACGT
GGTCGTACTTCTCTGGCAGCTCCTCCGGGATGAAGCGATCTTCACCGATC
CACTGGTCTTCCAGCCGGAGAGGCATCTAGGAGAAGAGGCACCCAGACTG
AGTCCCTACAGCTACATACCTTTCTCCGCTGGGCCGAGGAACTGCATTGG
TCAAAAGTTTGCTCTGCTGGAGATGAAAACCATGGTGACCAAAGTGATAC
GCCACTACCAGCTGCTTCCAATGGGAGCCGATGTGGAGCCATCCATTAAA
ATAGTGCTGCGCTCCAAGAGCGGGGTAAATGTTGGGCTGCGGCCGCGGTT
GTATTGAAAGCTTTCTAGACCAT

BS07821.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:17:51
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ae1-RA 1491 CG10755-PA 1..1491 17..1507 7455 100 Plus
Cyp4d8-RA 1392 CG4321-PA 199..312 350..463 195 78.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:17:53
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ae1-RA 1822 CG10755-RA 89..1583 15..1509 7475 100 Plus
Cyp4d8-RA 1573 CG4321-RA 319..432 350..463 195 78.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:17:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2179826..2180363 637..1174 2675 99.8 Plus
X 23542271 X 2179317..2179770 183..636 2270 100 Plus
X 23542271 X 2180418..2180759 1168..1509 1710 100 Plus
X 23542271 X 2179095..2179262 15..182 840 100 Plus
3L 28110227 3L 7494829..7494942 463..350 195 78.1 Minus
Blast to na_te.dros performed on 2014-11-27 14:17:50 has no hits.

BS07821.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:05:47 Download gff for BS07821.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 1..1491 17..1507 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:44:24 Download gff for BS07821.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 209..1706 12..1509 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:39:10 Download gff for BS07821.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 96..1580 22..1506 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:05:47 Download gff for BS07821.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 209..1706 12..1509 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:08:00 Download gff for BS07821.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 96..1580 22..1506 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:08:00 Download gff for BS07821.complete
Subject Subject Range Query Range Percent Splice Strand
X 2179102..2179262 22..182 100 -> Plus
X 2179317..2179770 183..636 100 -> Plus
X 2179826..2180358 637..1169 100 -> Plus
X 2180420..2180756 1170..1506 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:39:10 Download gff for BS07821.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2073135..2073295 22..182 100 -> Plus
arm_X 2073350..2073803 183..636 100 -> Plus
arm_X 2073859..2074391 637..1169 100 -> Plus
arm_X 2074453..2074789 1170..1506 100   Plus

BS07821.pep Sequence

Translation from 16 to 1506

> BS07821.pep
MLVVLLVALLVTRLVASLFRLALKELRHPLQGVVPSVSRVPLLGAAWQMR
SFQPDNLHDKFAEYVKRFGRSFMGTVLGHVVMVTAEPRHIDALLQGQHQL
KKGTMYFALRGWLGDGLLLSRGKEWHTMRKIITPTFHFSILEQFVEVFDR
QSSILVERLRTLSYGNEVVNIYPLVGLAALDIITETAMGVNVDAQGADSE
VVHAVKDLTNILATRFMRPHLLFPHLFRLCWPSGFRKQQAGVICLHEFTN
GIIEQRRRLLAREANQDKPTKPHALLDTLLRATVDGQPLTDKQIRDEVNT
FIFEGHDTTTSAVSFCLYLLSRHEAVQQKLFEELRMHYGQDLFRGVILSD
FATLPYLSCVVKESLRLYPPIPAVARCLEKDLVIDEGYIPVGTNVVVLLW
QLLRDEAIFTDPLVFQPERHLGEEAPRLSPYSYIPFSAGPRNCIGQKFAL
LEMKTMVTKVIRHYQLLPMGADVEPSIKIVLRSKSGVNVGLRPRLY*

BS07821.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:08:54
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ae1-PA 496 CG10755-PA 1..496 1..496 2557 100 Plus
Cyp4d2-PB 501 CG3466-PB 29..500 32..494 1091 45.5 Plus
Cyp4d2-PA 501 CG3466-PA 29..500 32..494 1091 45.5 Plus
Cyp4d14-PA 507 CG3540-PA 1..507 1..496 1026 41.5 Plus
Cyp4d14-PB 510 CG3540-PB 1..510 1..496 1014 41.3 Plus