Clone Sequence Records
BS07821.3prime Sequence
949 bp (872 high quality bases) assembled on 2006-01-06
> BS07821.3prime
ATGGTCTAGAAAGCTTTCAATACAACCGCGGCCGCAGCCCAACATTTACC
CCGCTCTTGGAGCGCAGCACTATTTTAATGGATGGCTCCACATCGGCTCC
CATTGGAAGCAGCTGGTAGTGGCGTATCACTTTGGTCACCATGGTTTTCA
TCTCCAGCAGAGCAAACTTTTGACCAATGCAGTTCCTCGGCCCAGCGGAG
AAAGGTATGTAGCTGTAGGGACTCAGTCTGGGTGCCTCTTCTCCTAGATG
CCTCTCCGGCTGGAAGACCAGTGGATCGGTGAAGATCGCTTCATCCCGGA
GGAGCTGCCAGAGAAGTACGACCACGTTGGTTCCCACAGGGATGTAGCCC
TCATCTATAACCAAATCCTTTTCCAGGCAGCGTGCGACGGCCGGAATAGG
CGGATAAAGACGCAGGGACTCTTTGACCACGCAGCTTAGATACGGTAACG
TCGCGAAATCCGAGAGAATAACGCCTCTGAATAAATCCTGGCCGTAGTGC
ATCCTCAGTTCCTCAAAAAGCTTTTGTTGCACTGCCTCATGGCGGGAAAG
CAGATACAAACAGAAGGAAACCGCTGAAGTCGTCGTATCGTGACCCTCAA
AGATGAAAGTGTTCACTTCATCGCGAATTTGCTTGTCAGTCAATGGTTGC
CCATCCACAGTTGCCCGCAGGAGCGTGTCCAGCAGGGCGTGGGGCTTTGT
TGGCTTATCTTGATTAGCCTCCCTGGCCAGTAAACGGCGTCGCTGCTCTA
TAATTCCGTTGGTAAACTCATGGAGGCAGATGACTCCTGCCTGTTGCTTT
CTGAATCCGCTGGGCCAGCACAGGCGAAAGAGGTGGGGAAAGAGGAGATG
CGGCCTCATGAACCTGGTGGCCAAGATGTTGGTTAGATCTTTTACAGCGT
GCACCACCTCAGAGTCAGCTCCTTGAGCGTCCACGTTCACGCCCATAGC
BS07821.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:56:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10755-PA | 1491 | Cyp4ae1-RA | 559..1491 | 949..17 | 4665 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:06:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ae1-RA | 1822 | CG10755-RA | 649..1583 | 949..15 | 4675 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:06:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2179826..2180363 | 887..350 | 2675 | 99.8 | Minus |
X | 23542271 | X | 2180418..2180759 | 356..15 | 1710 | 100 | Minus |
X | 23542271 | X | 2179709..2179770 | 949..888 | 310 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:06:42 has no hits.
BS07821.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:44 Download gff for
BS07821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10755-PA | 559..1491 | 17..949 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:19:05 Download gff for
BS07821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10755-PA | 559..1491 | 17..949 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:03:12 Download gff for
BS07821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 649..1583 | 15..949 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:07:00 Download gff for
BS07821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 649..1583 | 15..949 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:07:00 Download gff for
BS07821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2179709..2179770 | 888..949 | 100 | -> | Minus |
X | 2179826..2180358 | 355..887 | 100 | -> | Minus |
X | 2180420..2180759 | 15..354 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:03:12 Download gff for
BS07821.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2073742..2073803 | 888..949 | 100 | -> | Minus |
arm_X | 2073859..2074391 | 355..887 | 100 | -> | Minus |
arm_X | 2074453..2074792 | 15..354 | 100 | | Minus |
BS07821.5prime Sequence
924 bp (885 high quality bases) assembled on 2006-01-06
> BS07821.5prime
GAAGTTATCAGTCGACATGTTGGTGGTTTTGTTGGTGGCCCTCCTGGTGA
CTCGCCTAGTGGCCTCGCTGTTCCGTTTGGCGCTAAAGGAGCTTCGACAT
CCTTTGCAAGGCGTTGTGCCAAGTGTTTCGAGAGTTCCTCTACTAGGAGC
CGCCTGGCAGATGCGGAGTTTTCAGCCAGACAACTTGCATGATAAGTTCG
CCGAGTATGTTAAGCGTTTTGGTCGCAGTTTCATGGGCACTGTCTTAGGC
CATGTGGTTATGGTTACAGCGGAGCCCCGACATATCGATGCACTGCTGCA
GGGTCAGCATCAGTTGAAGAAGGGCACGATGTACTTTGCCTTACGCGGTT
GGCTGGGCGATGGACTGCTGCTGAGTCGTGGAAAGGAGTGGCACACGATG
CGCAAAATCATCACGCCCACGTTTCACTTTAGCATCCTGGAGCAGTTTGT
CGAGGTCTTCGATAGGCAGAGCAGCATATTAGTGGAGCGTTTGAGAACGC
TGTCGTACGGCAACGAGGTCGTGAACATCTATCCCTTGGTGGGCTTGGCT
GCCCTAGACATAATCACCGAAACTGCTATGGGCGTGAACGTGGACGCTCA
AGGAGCTGACTCTGAGGTGGTGCACGCTGTAAAAGATCTAACCAACATCT
TGGCCACCAGGTTCATGAGGCCGCATCTCCTCTTTCCCCACCTCTTTCGC
CTGTGCTGGCCCAGCGGATTCAGAAAGCAACAGGCAGGAGTCATCTGCCT
CCATGAGTTTACCAACGGAATTATAGAGCAGCGACGCCGTTTACTGGCCA
GGGAGGCTAATCAAGATAAGCCAACAAAGCCCCACGCCCTGCTGGACACG
CTCCTGCGGGCAACTGTGGATGGGCAACCATTGACTGANCAGCAAATTCG
CGATGAAGTGAACACTTTCATCTT
BS07821.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:56:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10755-PA | 1491 | Cyp4ae1-RA | 1..908 | 17..924 | 4496 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:29:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ae1-RA | 1822 | CG10755-RA | 89..998 | 15..924 | 4524 | 99.8 | Plus |
Cyp4d8-RA | 1573 | CG4321-RA | 319..432 | 350..463 | 215 | 82.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:29:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2179317..2179770 | 183..636 | 2270 | 100 | Plus |
X | 23542271 | X | 2179826..2180113 | 637..924 | 1414 | 99.3 | Plus |
X | 23542271 | X | 2179095..2179262 | 15..182 | 840 | 100 | Plus |
3L | 28110227 | 3L | 7494829..7494942 | 463..350 | 195 | 78.1 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:29:14 has no hits.
BS07821.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:45 Download gff for
BS07821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10755-PA | 1..908 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:19:07 Download gff for
BS07821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10755-PA | 1..908 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:05:18 Download gff for
BS07821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 86..998 | 12..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:09:31 Download gff for
BS07821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 86..998 | 12..924 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:09:31 Download gff for
BS07821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2179092..2179262 | 12..182 | 99 | -> | Plus |
X | 2179317..2179770 | 183..636 | 100 | -> | Plus |
X | 2179826..2180113 | 637..924 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:05:18 Download gff for
BS07821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2073125..2073295 | 12..182 | 99 | -> | Plus |
arm_X | 2073350..2073803 | 183..636 | 100 | -> | Plus |
arm_X | 2073859..2074146 | 637..924 | 99 | | Plus |
BS07821.complete Sequence
1523 bp (1523 high quality bases) assembled on 2006-01-10
> BS07821.complete
GAAGTTATCAGTCGACATGTTGGTGGTTTTGTTGGTGGCCCTCCTGGTGA
CTCGCCTAGTGGCCTCGCTGTTCCGTTTGGCGCTAAAGGAGCTTCGACAT
CCTTTGCAAGGCGTTGTGCCAAGTGTTTCGAGAGTTCCTCTACTAGGAGC
CGCCTGGCAGATGCGGAGTTTTCAGCCAGACAACTTGCATGATAAGTTCG
CCGAGTATGTTAAGCGTTTTGGTCGCAGTTTCATGGGCACTGTCTTAGGC
CATGTGGTTATGGTTACAGCGGAGCCCCGACATATCGATGCACTGCTGCA
GGGTCAGCATCAGTTGAAGAAGGGCACGATGTACTTTGCCTTACGCGGTT
GGCTGGGCGATGGACTGCTGCTGAGTCGTGGAAAGGAGTGGCACACGATG
CGCAAAATCATCACGCCCACGTTTCACTTTAGCATCCTGGAGCAGTTTGT
CGAGGTCTTCGATAGGCAGAGCAGCATATTAGTGGAGCGTTTGAGAACGC
TGTCGTACGGCAACGAGGTCGTGAACATCTATCCCTTGGTGGGCTTGGCT
GCCCTAGACATAATCACCGAAACTGCTATGGGCGTGAACGTGGACGCTCA
AGGAGCTGACTCTGAGGTGGTGCACGCTGTAAAAGATCTAACCAACATCT
TGGCCACCAGGTTCATGAGGCCGCATCTCCTCTTTCCCCACCTCTTTCGC
CTGTGCTGGCCCAGCGGATTCAGAAAGCAACAGGCAGGAGTCATCTGCCT
CCATGAGTTTACCAACGGAATTATAGAGCAGCGACGCCGTTTACTGGCCA
GGGAGGCTAATCAAGATAAGCCAACAAAGCCCCACGCCCTGCTGGACACG
CTCCTGCGGGCAACTGTGGATGGGCAACCATTGACTGACAAGCAAATTCG
CGATGAAGTGAACACTTTCATCTTTGAGGGTCACGATACGACGACTTCAG
CGGTTTCCTTCTGTTTGTATCTGCTTTCCCGCCATGAGGCAGTGCAACAA
AAGCTTTTTGAGGAACTGAGGATGCACTACGGCCAGGATTTATTCAGAGG
CGTTATTCTCTCGGATTTCGCGACGTTACCGTATCTAAGCTGCGTGGTCA
AAGAGTCCCTGCGTCTTTATCCGCCTATTCCGGCCGTCGCACGCTGCCTG
GAAAAGGATTTGGTTATAGATGAGGGCTACATCCCTGTGGGAACCAACGT
GGTCGTACTTCTCTGGCAGCTCCTCCGGGATGAAGCGATCTTCACCGATC
CACTGGTCTTCCAGCCGGAGAGGCATCTAGGAGAAGAGGCACCCAGACTG
AGTCCCTACAGCTACATACCTTTCTCCGCTGGGCCGAGGAACTGCATTGG
TCAAAAGTTTGCTCTGCTGGAGATGAAAACCATGGTGACCAAAGTGATAC
GCCACTACCAGCTGCTTCCAATGGGAGCCGATGTGGAGCCATCCATTAAA
ATAGTGCTGCGCTCCAAGAGCGGGGTAAATGTTGGGCTGCGGCCGCGGTT
GTATTGAAAGCTTTCTAGACCAT
BS07821.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:17:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ae1-RA | 1491 | CG10755-PA | 1..1491 | 17..1507 | 7455 | 100 | Plus |
Cyp4d8-RA | 1392 | CG4321-PA | 199..312 | 350..463 | 195 | 78.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:17:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ae1-RA | 1822 | CG10755-RA | 89..1583 | 15..1509 | 7475 | 100 | Plus |
Cyp4d8-RA | 1573 | CG4321-RA | 319..432 | 350..463 | 195 | 78.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:17:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2179826..2180363 | 637..1174 | 2675 | 99.8 | Plus |
X | 23542271 | X | 2179317..2179770 | 183..636 | 2270 | 100 | Plus |
X | 23542271 | X | 2180418..2180759 | 1168..1509 | 1710 | 100 | Plus |
X | 23542271 | X | 2179095..2179262 | 15..182 | 840 | 100 | Plus |
3L | 28110227 | 3L | 7494829..7494942 | 463..350 | 195 | 78.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:17:50 has no hits.
BS07821.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:05:47 Download gff for
BS07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 1..1491 | 17..1507 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:44:24 Download gff for
BS07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 209..1706 | 12..1509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:39:10 Download gff for
BS07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 96..1580 | 22..1506 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:05:47 Download gff for
BS07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 209..1706 | 12..1509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:08:00 Download gff for
BS07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 96..1580 | 22..1506 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:08:00 Download gff for
BS07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2179102..2179262 | 22..182 | 100 | -> | Plus |
X | 2179317..2179770 | 183..636 | 100 | -> | Plus |
X | 2179826..2180358 | 637..1169 | 100 | -> | Plus |
X | 2180420..2180756 | 1170..1506 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:39:10 Download gff for
BS07821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2073135..2073295 | 22..182 | 100 | -> | Plus |
arm_X | 2073350..2073803 | 183..636 | 100 | -> | Plus |
arm_X | 2073859..2074391 | 637..1169 | 100 | -> | Plus |
arm_X | 2074453..2074789 | 1170..1506 | 100 | | Plus |
BS07821.pep Sequence
Translation from 16 to 1506
> BS07821.pep
MLVVLLVALLVTRLVASLFRLALKELRHPLQGVVPSVSRVPLLGAAWQMR
SFQPDNLHDKFAEYVKRFGRSFMGTVLGHVVMVTAEPRHIDALLQGQHQL
KKGTMYFALRGWLGDGLLLSRGKEWHTMRKIITPTFHFSILEQFVEVFDR
QSSILVERLRTLSYGNEVVNIYPLVGLAALDIITETAMGVNVDAQGADSE
VVHAVKDLTNILATRFMRPHLLFPHLFRLCWPSGFRKQQAGVICLHEFTN
GIIEQRRRLLAREANQDKPTKPHALLDTLLRATVDGQPLTDKQIRDEVNT
FIFEGHDTTTSAVSFCLYLLSRHEAVQQKLFEELRMHYGQDLFRGVILSD
FATLPYLSCVVKESLRLYPPIPAVARCLEKDLVIDEGYIPVGTNVVVLLW
QLLRDEAIFTDPLVFQPERHLGEEAPRLSPYSYIPFSAGPRNCIGQKFAL
LEMKTMVTKVIRHYQLLPMGADVEPSIKIVLRSKSGVNVGLRPRLY*
BS07821.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:08:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ae1-PA | 496 | CG10755-PA | 1..496 | 1..496 | 2557 | 100 | Plus |
Cyp4d2-PB | 501 | CG3466-PB | 29..500 | 32..494 | 1091 | 45.5 | Plus |
Cyp4d2-PA | 501 | CG3466-PA | 29..500 | 32..494 | 1091 | 45.5 | Plus |
Cyp4d14-PA | 507 | CG3540-PA | 1..507 | 1..496 | 1026 | 41.5 | Plus |
Cyp4d14-PB | 510 | CG3540-PB | 1..510 | 1..496 | 1014 | 41.3 | Plus |