Clone BS07826 Report

Search the DGRC for BS07826

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:78
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG10137-RA
Protein status:BS07826.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07826.3prime Sequence

928 bp (873 high quality bases) assembled on 2006-01-06

> BS07826.3prime
ATGGTCTAGAAAGCTTCTAATTTGACTTCTTGAGATTCCTCTTGCGTATA
TTCCCGGGACAGCCGCCGGCGCTGAGGAGATGCAATTTCCAGCCGCCGTC
TTGGGGAAGGTGAACATCGTCATGACAAAGGGGACATCGAGCAGCACCCG
TTTTCAGTTCCCGACAATAGTCCTCCATCTGATGTAGTTCATATAGCTGC
TTGTGCACCGATTCAGTGCAACGGACACAGACCACGTAGCTCTCCTTGGC
ATCGCATTCCGTTGTCAGGTGGTAGTTCAGAGCAGCAACCTCCAGCACTT
GACTGCATTGTGGGCACTTGGTGAGGAAAGGACACGCCTTCCAGTAGTGT
CGGTCCAACTGAGTAGCGTCACTGCCGGCACACGACCAGTCGCAAAAGGG
GCAACGTATTTTGGGTGTGTTGTCTTCAGTGGACTCCGAGTTGGAAGCGG
ATCCCTTGCGCGAGTTGCTCACGGATAGCATGGAGCGCTTGAGCTGCTCG
TTGTACTGCTGCTTTCCATTGCAGCTGGCATATCCATTACTGGAGCTGGC
CATTGGGCCTAGGTTATGACCACTGCGGCTATTCATCAGTCGAGAGGCAT
CTGAGCTGGTGGACGCCTTATCCGCCGGCGGTGTTGCCGCATCGCCCGAG
CTGTGACCCCCGCCATACTTGCTAGCCTCCAGCAGCTCCTGCTTGCGGTC
CAGATCCAACTTGTCAAATTCGGTGAAGAGTTGGCGGTACAAGAGATTGC
GACGCGTGATGTCGTCATCCGGAGGTAACTGCTTGCGCACCAGTCGGGGA
TTCACCTTGTAGACGAGCAGCAGGATGCGCTCGGCCACCTTTCGCACAGG
CTCCGCTGGATGATGGATGCCGGAGCAGCCGCACTCGGACAATGCCCTGC
AGGTGAGTCCACTATGCTTGTCCGTGCT

BS07826.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:56:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-PA 2826 CG10137-RA 1915..2826 928..17 4560 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:31:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-RA 3227 CG10137-RA 2001..2914 928..15 4570 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:31:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19531590..19532110 928..408 2605 100 Minus
2L 23513712 2L 19532167..19532312 407..262 730 100 Minus
2L 23513712 2L 19532527..19532672 160..15 730 100 Minus
U 3151297 U 2744806..2744951 160..15 730 100 Minus
2L 23513712 2L 19532366..19532467 261..160 510 100 Minus
U 3151297 U 2744707..2744746 199..160 200 100 Minus
Blast to na_te.dros performed on 2015-02-11 16:31:49 has no hits.

BS07826.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:52 Download gff for BS07826.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-PA 1915..2826 17..928 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:19:16 Download gff for BS07826.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-PA 1915..2826 17..928 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:43:21 Download gff for BS07826.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 2001..2914 15..928 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:16:07 Download gff for BS07826.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 2001..2914 15..928 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:16:07 Download gff for BS07826.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19532528..19532672 15..159 100   Minus
2L 19531590..19532110 408..928 100 -> Minus
2L 19532167..19532312 262..407 100 -> Minus
2L 19532366..19532467 160..261 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:43:21 Download gff for BS07826.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19531590..19532110 408..928 100 -> Minus
arm_2L 19532167..19532312 262..407 100 -> Minus
arm_2L 19532366..19532467 160..261 100 -> Minus
arm_2L 19532528..19532672 15..159 100   Minus

BS07826.5prime Sequence

881 bp (767 high quality bases) assembled on 2006-01-06

> BS07826.5prime
GAAGTTATCAGTCGACATGGCTAAGAAAATACCTTTTAACGTGGTGTTCG
CCTCAGACGAGGATGTTAACTTTCCGGCTAGCGAGTTAAACAATCACGGC
CCCACAGTTCACGGATGGCGAAGTGCTCCGAACGGCAGCCTCACCTCACA
TGACATCATCCTCCGATTCCAGCAGCCGGCCAAGATCTATCGCATCCAGC
TCCTGGCACACCAGTATCTTATACCTGAGAAAGTAGAACTCTGGCTGCAC
TACTCGCCCAAATCCCTGCCCAGCACTCCATCCTCGCAGTACTTTGACTT
TTTGGGTTTTGTTGCCCTGGCGGATAATGCCAACACGAACTACAAGTCTC
GGGAGCTGCAGAGCGTAACCGTGTGTCCACGTAGGGGCACACATCTTAAG
CTGCGTCTGATTGGCGTCCAAGGAAACGACTACAATGACACAGGCCAGAT
TTCCCTACTAGCGGTAAATGTCCTGGGCGAGGATCTGGAAGTGGGGCCAA
ATAATGGCAACGGAGAGGAGCACTTGGCCAACGAGGCCCCACCGTTGGAC
ACGGCCACCGGAGAACTGGCCCTGGCCTCCGTCTGTGATGACCTGCTTTT
CTCCATGTATGTGGAGGAGTCAATAGTGCAGACCATCCGAGAGTTGGAAC
AGCGAAAGATTTTGGCCGTTAACTCAGAAAGATTCGAGTACGCCCGCAAA
CTGAAGCTATGCATGACAGCTTTAAGGACTGCCGGAGAACGTTTGGGGCG
CTATGCTCTGGCCAAGAGGCAGGCTGTTCAGCANGAGGACTTTACCACGG
CCAGGCTACGCAAGGAGCAGATCGAGATGTACCGGGCGGCAGTACTTCGA
CAATTGCAGGTGCATCAGCTTCTGGAACCGC

BS07826.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:56:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-PA 2826 CG10137-RA 1..865 17..881 4306 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:32:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-RA 3227 CG10137-RA 81..951 11..881 4329 99.8 Plus
CG10165-RD 1440 CG10165-RD 366..537 224..53 860 100 Minus
CG10165-RB 1342 CG10165-RB 268..439 224..53 860 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:32:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19529094..19529750 225..881 3274 99.8 Plus
2L 23513712 2L 19528774..19528945 53..224 860 100 Plus
2L 23513712 2L 19526766..19526811 11..56 215 97.8 Plus
Blast to na_te.dros performed on 2015-02-12 00:32:51 has no hits.

BS07826.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:24:53 Download gff for BS07826.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-PA 1..865 17..881 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:19:18 Download gff for BS07826.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-PA 1..865 17..881 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 20:00:21 Download gff for BS07826.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 81..951 11..881 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:00:26 Download gff for BS07826.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 81..951 11..881 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:00:26 Download gff for BS07826.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19526766..19526811 11..56 97 -> Plus
2L 19528778..19528945 57..224 100 -> Plus
2L 19529094..19529750 225..881 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 20:00:21 Download gff for BS07826.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19526766..19526811 11..56 97 -> Plus
arm_2L 19528778..19528945 57..224 100 -> Plus
arm_2L 19529094..19529750 225..881 99   Plus

BS07826.complete Sequence

2858 bp assembled on 2008-01-03

GenBank Submission: FJ636002

> BS07826.complete
GAAGTTATCAGTCGACATGGCTAAGAAAATACCTTTTAACGTGGTGTTCG
CCTCAGACGAGGATGTTAACTTTCCGGCTAGCGAGTTAAACAATCACGGC
CCCACAGTTCACGGATGGCGAAGTGCTCCGAACGGCAGCCTCACCTCACA
TGACATCATCCTCCGATTCCAGCAGCCGGCCAAGATCTATCGCATCCAGC
TCCTGGCACACCAGTATCTTATACCTGAGAAAGTAGAACTCTGGCTGCAC
TACTCGCCCAAATCCCTGCCCAGCACTCCATCCTCGCAGTACTTTGACTT
TTTGGGTTTTGTTGCCCTGGCGGATAATGCCAACACGAACTACAAGTCTC
GGGAGCTGCAGAGCGTAACCGTGTGTCCACGTAGGGGCACACATCTTAAG
CTGCGTCTGATTGGCGTCCAAGGAAACGACTACAATGACACAGGCCAGAT
TTCCCTACTAGCGGTAAATGTCCTGGGCGAGGATCTGGAAGTGGGGCCAA
ATAATGGCAACGGAGAGGAGCACTTGGCCAACGAGGCCCCACCGTTGGAC
ACGGCCACCGGAGAACTGGCCCTGGCCTCCGTCTGTGATGACCTGCTTTT
CTCCATGTATGTGGAGGAGTCAATAGTGCAGACCATCCGAGAGTTGGAAC
AGCGAAAGATTTTGGCCGTTAACTCAGAAAGATTCGAGTACGCCCGCAAA
CTGAAGCTATGCATGACAGCTTTAAGGACTGCCGGAGAACGTTTGGGGCG
CTATGCTCTGGCCAAGAGGCAGGCTGTTCAGCAGGAGGACTTTACCACGG
CCAGGCTACGCAAGGAGCAGATCGAGATGTACCGGGCGGCAGTACTTCGA
CAATTGCAGGTGCATCAGCTTCTGGAACCGCAGGGTGTGACCTTAAGCTC
CAATGACCAAAGCTGCGAGATCTATGCGGGTGGGAAGCCCAGTCTGCCAT
CGGCTCCTAGCCTGCAGGATGTGGCACAGGCACTTGCGGAAGCCACCTTC
AGTCCCAAGAGCATGACGAGTCTCAGCTTAGAGGACAAATCCTCGACCGA
TGGCTCCCAGCCTGGTAACGACAATACGTTGACAGCTCCGGCACCTGCTC
CAGCACCCGCTCCTGCGCCCACCTCTTTGCAGGCCACGCCCACTCCCACG
CTGGGGGGCTGGCGCAAGTCCCACGACGAGCTGCCGCAGTCGCCACGTCT
GCCTTCAAGGCACAGCTCACCAATGTCCAGCCGACAGGGATCGCTGCGCA
GGCGCAACAAGAGCGTTCCACGAAACTCCTACGAAGACTACGAGGAGCGG
GCCATTCCCACGCTGCGACAGGAGTGCCAAGGCAACGCGCTACTGGAAGC
GGATCCGAACCGTGGGCGTTCGCGCCTGAACGACCGCGAGCGTCGCCAGG
CAGCGCTTCCCATCCTGGTCTTCGGCAATGAGCTGGTGGAGCAGTTCTAT
TCGCGTCAGTTTCAGGACCGCGAGGATGGCTTGATGCGTCTGCGTAACTT
CCTAAAGGAGCACGACCTGTTAGAGGCGTCGAGCAACGAGCACGCTGCCA
GTCCCAACAAAGTGGCCCGCAGCGCCGCCCTTCTGCTGCATCGCGCTGTA
AGAGATGCCGTTTACTCCGTGTTTAGCCAAGCTACTGAGACGGTACGCAT
GCTGTTCCTAGAGTATGTGCCCGGTCGAGTTTCCCCCAACGAGGTGGCAC
GTTGCGTGGACCGCCTGCTGCCCGAATTGCTGGCCAAGTCCGGCGATCCA
TCTGCTCGATTGCACACTCTGGCCCAGCACACGATCCTAAGCATCGCCGC
CTGTCCGGAGGTGGCGGAGCAGCACCTGGTTGCGCCAGCACTATCACGAA
GCGTTGGATCCGGAACCCACCAGCGACTGGCAATGAGTCGGCTGCAGATG
CTGGAGCAGCTGGTCAACACTCAGGGCATTAGCACGGACAAGCATAGTGG
ACTCACCTGCAGGGCATTGTCCGAGTGCGGCTGCTCCGGCATCCATCATC
CAGCGGAGCCTGTGCGAAAGGTGGCCGAGCGCATCCTGCTGCTCGTCTAC
AAGGTGAATCCCCGACTGGTGCGCAAGCAGTTACCTCCGGATGACGACAT
CACGCGTCGCAATCTCTTGTACCGCCAACTCTTCACCGAATTTGACAAGT
TGGATCTGGACCGCAAGCAGGAGCTGCTGGAGGCTAGCAAGTATGGCGGG
GGTCACAGCTCGGGCGATGCGGCAACACCGCCGGCGGATAAGGCGTCCAC
CAGCTCAGATGCCTCTCGACTGATGAATAGCCGCAGTGGTCATAACCTAG
GCCCAATGGCCAGCTCCAGTAATGGATATGCCAGCTGCAATGGAAAGCAG
CAGTACAACGAGCAGCTCAAGCGCTCCATGCTATCCGTGAGCAACTCGCG
CAAGGGATCCGCTTCCAACTCGGAGTCCACTGAAGACAACACACCCAAAA
TACGTTGCCCCTTTTGCGACTGGTCGTGTGCCGGCAGTGACGCTACTCAG
TTGGACCGACACTACTGGAAGGCGTGTCCTTTCCTCACCAAGTGCCCACA
ATGCAGTCAAGTGCTGGAGGTTGCTGCTCTGAACTACCACCTGACAACGG
AATGCGATGCCAAGGAGAGCTACGTGGTCTGTGTCCGTTGCACTGAATCG
GTGCACAAGCAGCTATATGAACTACATCAGATGGAGGACTATTGTCGGGA
ACTGAAAACGGGTGCTGCTCGATGTCCCCTTTGTCATGACGATGTTCACC
TTCCCCAAGACGGCGGCTGGAAATTGCATCTCCTCAGCGCCGGCGGCTGT
CCCGGGAATATACGCAAGAGGAATCTCAAGAAGTCAAATTAGAAGCTTTC
TAGACCAT

BS07826.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:42:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-RA 2826 CG10137-PA 1..2826 17..2842 14130 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:42:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-RA 3227 CG10137-RA 81..2914 11..2844 14155 100 Plus
CG10165-RD 1440 CG10165-RD 116..316 1321..1121 1005 100 Minus
CG10165-RD 1440 CG10165-RD 366..537 224..53 860 100 Minus
CG10165-RB 1342 CG10165-RB 268..439 224..53 860 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:42:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19529094..19530190 225..1321 5485 100 Plus
2L 23513712 2L 19531094..19532110 1435..2451 5085 100 Plus
2L 23513712 2L 19528774..19528945 53..224 860 100 Plus
2L 23513712 2L 19532167..19532312 2452..2597 730 100 Plus
2L 23513712 2L 19532527..19532672 2699..2844 730 100 Plus
U 3151297 U 2744806..2744951 2699..2844 730 100 Plus
2L 23513712 2L 19530914..19531031 1321..1438 590 100 Plus
2L 23513712 2L 19532366..19532467 2598..2699 510 100 Plus
2L 23513712 2L 19526766..19526811 11..56 215 97.8 Plus
U 3151297 U 2744707..2744746 2660..2699 200 100 Plus
Blast to na_te.dros performed on 2014-11-27 15:42:23 has no hits.

BS07826.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:08:16 Download gff for BS07826.complete
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 1..2826 17..2842 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:30:51 Download gff for BS07826.complete
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 87..2912 17..2842 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:01 Download gff for BS07826.complete
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 87..2912 17..2842 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:08:16 Download gff for BS07826.complete
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 81..2914 11..2844 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:14:27 Download gff for BS07826.complete
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 87..2912 17..2842 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:14:27 Download gff for BS07826.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19526772..19526811 17..56 100 -> Plus
2L 19528778..19528945 57..224 100 -> Plus
2L 19529094..19530189 225..1320 100 -> Plus
2L 19530914..19531028 1321..1435 100 -> Plus
2L 19531095..19532110 1436..2451 100 -> Plus
2L 19532167..19532312 2452..2597 100 -> Plus
2L 19532366..19532467 2598..2699 100 -> Plus
2L 19532528..19532670 2700..2842 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:01 Download gff for BS07826.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19526772..19526811 17..56 100 -> Plus
arm_2L 19528778..19528945 57..224 100 -> Plus
arm_2L 19529094..19530189 225..1320 100 -> Plus
arm_2L 19530914..19531028 1321..1435 100 -> Plus
arm_2L 19531095..19532110 1436..2451 100 -> Plus
arm_2L 19532167..19532312 2452..2597 100 -> Plus
arm_2L 19532366..19532467 2598..2699 100 -> Plus
arm_2L 19532528..19532670 2700..2842 100   Plus

BS07826.pep Sequence

Translation from 16 to 2841

> BS07826.pep
MAKKIPFNVVFASDEDVNFPASELNNHGPTVHGWRSAPNGSLTSHDIILR
FQQPAKIYRIQLLAHQYLIPEKVELWLHYSPKSLPSTPSSQYFDFLGFVA
LADNANTNYKSRELQSVTVCPRRGTHLKLRLIGVQGNDYNDTGQISLLAV
NVLGEDLEVGPNNGNGEEHLANEAPPLDTATGELALASVCDDLLFSMYVE
ESIVQTIRELEQRKILAVNSERFEYARKLKLCMTALRTAGERLGRYALAK
RQAVQQEDFTTARLRKEQIEMYRAAVLRQLQVHQLLEPQGVTLSSNDQSC
EIYAGGKPSLPSAPSLQDVAQALAEATFSPKSMTSLSLEDKSSTDGSQPG
NDNTLTAPAPAPAPAPAPTSLQATPTPTLGGWRKSHDELPQSPRLPSRHS
SPMSSRQGSLRRRNKSVPRNSYEDYEERAIPTLRQECQGNALLEADPNRG
RSRLNDRERRQAALPILVFGNELVEQFYSRQFQDREDGLMRLRNFLKEHD
LLEASSNEHAASPNKVARSAALLLHRAVRDAVYSVFSQATETVRMLFLEY
VPGRVSPNEVARCVDRLLPELLAKSGDPSARLHTLAQHTILSIAACPEVA
EQHLVAPALSRSVGSGTHQRLAMSRLQMLEQLVNTQGISTDKHSGLTCRA
LSECGCSGIHHPAEPVRKVAERILLLVYKVNPRLVRKQLPPDDDITRRNL
LYRQLFTEFDKLDLDRKQELLEASKYGGGHSSGDAATPPADKASTSSDAS
RLMNSRSGHNLGPMASSSNGYASCNGKQQYNEQLKRSMLSVSNSRKGSAS
NSESTEDNTPKIRCPFCDWSCAGSDATQLDRHYWKACPFLTKCPQCSQVL
EVAALNYHLTTECDAKESYVVCVRCTESVHKQLYELHQMEDYCRELKTGA
ARCPLCHDDVHLPQDGGWKLHLLSAGGCPGNIRKRNLKKSN*

BS07826.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-PA 941 CG10137-PA 1..941 1..941 4896 100 Plus