Clone Sequence Records
BS07851.3prime Sequence
819 bp (775 high quality bases) assembled on 2006-01-06
> BS07851.3prime
ATGGTCTAGAAAGCTTCTAGTTCTGTTTCCAACTGGTCGCTTTATAGTAG
ACCTCGCGGTACATGGTGGGGCAGGCGGCCTTGCCGTTCGACTTCGTCGT
CTTGAAATCAATATTGGTGCGAATGGGCCGGTGCAGGAGCGGCTGGGGCG
GCCGGTAATTGTTGCCCAGGGGCGCTTTCGGGTGGTCTGGACTGCCCTGC
ATCAGGCGGCGCAGGGCGTGCAACTGTTGCTTTGTGATGTAGATGGGCTT
GTTGAGCACCACCCAGGTGACTGTTTCGTGGCAGGCAGGTGCCGTTGTGG
ATCCATCGTAGGTCATATAGTGATCCGTGTCCGGTAGCAGTCCGCGGATG
GAGAGACGCTTAACGAAGGCCTCATCGCCGCCATAGCGAATGCGCTCCAG
CTGATCGGTGAGCATGCGCAGCTCCGCATTCGAGAGATCTCCAAGCTGCA
GCAGAATGGAGACACCGACGATGCCCTGGGCGCGATTGAGGGCATCTGAG
AAATTTGCATACAGCTGGGAATTGTAGCCGAATATTTGTATCTCCGCCGG
GAACGTATAGCCCTCGACACTGTGCTCCGATCCAAATTGGTCGTTCAATC
CGTAGTGCATGTGGATCTCGTGGAAACGGTAGCGATACGACAACGGTCCG
CCCGATATATTCACTGGCGTCTGCATACCGTCGTAGTTGGCCACCGTATC
ATTGCCGGCCGTAAAGATGACGCTGTGGCCCGTATTAGTGATCAATCCGG
ATATCCTGTGCTTGTCTATGTGCATGGGCCTCAAGTTGGGATCAAATAGC
AGGCGTTGGGGGTCCAGAT
BS07851.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:56:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32698-PA | 984 | CG32698-RA | 182..984 | 819..17 | 3990 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 08:15:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32698-RD | 1775 | CG32698-RD | 670..1475 | 819..14 | 4015 | 99.9 | Minus |
| CG32698-RB | 2007 | CG32698-RB | 902..1707 | 819..14 | 4015 | 99.9 | Minus |
| CG32698-RC | 8207 | CG32698-RC | 879..1684 | 819..14 | 4015 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 08:15:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9845957..9846180 | 447..224 | 1120 | 100 | Minus |
| X | 23542271 | X | 9836593..9836806 | 755..542 | 1070 | 100 | Minus |
| X | 23542271 | X | 9848528..9848715 | 227..40 | 940 | 100 | Minus |
| X | 23542271 | X | 9845699..9845796 | 543..446 | 490 | 100 | Minus |
| X | 23542271 | X | 9836386..9836450 | 819..755 | 310 | 98.5 | Minus |
Blast to na_te.dros performed on 2015-02-01 08:15:21 has no hits.
BS07851.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:25:41 Download gff for
BS07851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-PA | 182..984 | 17..819 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:20:24 Download gff for
BS07851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-PA | 182..984 | 17..819 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:22:22 Download gff for
BS07851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-RA | 657..1466 | 6..819 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:50:08 Download gff for
BS07851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-RC | 879..1688 | 6..819 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 09:50:08 Download gff for
BS07851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9836386..9836450 | 755..819 | 98 | -> | Minus |
| X | 9836594..9836806 | 542..754 | 100 | -> | Minus |
| X | 9845701..9845796 | 446..541 | 100 | -> | Minus |
| X | 9845959..9846180 | 224..445 | 100 | -> | Minus |
| X | 9848532..9848715 | 40..223 | 100 | -> | Minus |
| X | 9848901..9848925 | 15..39 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:22:22 Download gff for
BS07851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9730419..9730483 | 755..819 | 98 | -> | Minus |
| arm_X | 9730627..9730839 | 542..754 | 100 | -> | Minus |
| arm_X | 9739734..9739829 | 446..541 | 100 | -> | Minus |
| arm_X | 9739992..9740213 | 224..445 | 100 | -> | Minus |
| arm_X | 9742565..9742748 | 40..223 | 100 | -> | Minus |
| arm_X | 9742934..9742958 | 15..39 | 100 | -> | Minus |
BS07851.5prime Sequence
885 bp (781 high quality bases) assembled on 2006-01-06
> BS07851.5prime
GAAGTTATCAGTCGACATGGAGCTGCTGCAGGCCCTCTGCTGTACGCTGC
TCCTGCTTTTGGCCCGGATGCAAGTTCTGCTTGCCGTCAGTTGGGAGGAT
TGGTGGACATACGATGGCATCTCAGGACCTGCCTTTTGGGGCCTCATCAA
TCCGGAGTGGTCGCTCTGCAACAAGGGTCGTCGCCAATCGCCGGTCAATC
TGGAACCCCAACGCCTGCTATTTGATCCCAACTTGAGGCCCATGCACATA
GACAAGCACAGGATATCCGGATTGATCACTAATACGGGCCACAGCGTCAT
CTTTACGGCCGGCAATGATACGGTGGCCAACTACGACGGTATGCAGACGC
CAGTGAATATATCGGGCGGACCGTTGTCGTATCGCTACCGTTTCCACGAG
ATCCACATGCACTACGGATTGAACGACCAATTTGGATCGGAGCACAGTGT
CGAGGGCTATACGTTCCCGGCGGAGATACAAATATTCGGCTACAATTCCC
AGCTGTATGCAAATTTCTCAGATGCCCTCAATCGCGCCCAGGGCATCGTC
GGTGTCTCCATTCTGCTGCAGCTTGGAGATCTCTCGAATGCGGAGCTGCG
CATGCTCACCGATCAGCTGGAGCGCATTCGCTATGGCGGCGATGAGGCCT
TCGTTAAGCGTCTCTCCATCCGCGGACTGCTACCGGACACGGATCACTAT
ATGACCTACGATGGATCCACAACGGCACCTGCCTGCCACGAAACAGTCAC
CTGGGTGGTGCTCAACAAGCCCATCTACATCACAAAGCAACAGTTGCACG
CCCTGCGCCGCCTGATGCAGGGCAGTCCAGACCACCCGAAAGCGCCCCTG
GGCAACAATTACCGGCCGCCCCAGCCGCTCCTGCA
BS07851.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:56:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32698-PA | 984 | CG32698-RA | 1..869 | 17..885 | 4345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:19:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32698-RD | 1775 | CG32698-RD | 489..1357 | 17..885 | 4345 | 100 | Plus |
| CG32698-RB | 2007 | CG32698-RB | 721..1589 | 17..885 | 4345 | 100 | Plus |
| CG32698-RC | 8207 | CG32698-RC | 698..1566 | 17..885 | 4345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:19:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9845957..9846180 | 570..793 | 1120 | 100 | Plus |
| X | 23542271 | X | 9836593..9836806 | 262..475 | 1070 | 100 | Plus |
| X | 23542271 | X | 9836310..9836450 | 122..262 | 705 | 100 | Plus |
| X | 23542271 | X | 9845699..9845796 | 474..571 | 490 | 100 | Plus |
| X | 23542271 | X | 9848528..9848623 | 790..885 | 480 | 100 | Plus |
| X | 23542271 | X | 9812099..9812156 | 17..74 | 290 | 100 | Plus |
| X | 23542271 | X | 9832490..9832543 | 73..126 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 14:19:04 has no hits.
BS07851.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:25:42 Download gff for
BS07851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-PA | 1..868 | 17..884 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:20:25 Download gff for
BS07851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-PA | 1..868 | 17..884 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:36:22 Download gff for
BS07851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-RA | 476..1343 | 17..884 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:56:09 Download gff for
BS07851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-RC | 698..1565 | 17..884 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:56:09 Download gff for
BS07851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9812099..9812156 | 17..74 | 100 | -> | Plus |
| X | 9832492..9832542 | 75..125 | 100 | -> | Plus |
| X | 9836314..9836450 | 126..262 | 100 | -> | Plus |
| X | 9836594..9836806 | 263..475 | 100 | -> | Plus |
| X | 9845701..9845796 | 476..571 | 100 | -> | Plus |
| X | 9845959..9846180 | 572..793 | 100 | -> | Plus |
| X | 9848532..9848622 | 794..884 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:36:22 Download gff for
BS07851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9706132..9706189 | 17..74 | 100 | -> | Plus |
| arm_X | 9726525..9726575 | 75..125 | 100 | -> | Plus |
| arm_X | 9730347..9730483 | 126..262 | 100 | -> | Plus |
| arm_X | 9730627..9730839 | 263..475 | 100 | -> | Plus |
| arm_X | 9739734..9739829 | 476..571 | 100 | -> | Plus |
| arm_X | 9739992..9740213 | 572..793 | 100 | -> | Plus |
| arm_X | 9742565..9742655 | 794..884 | 100 | | Plus |
BS07851.complete Sequence
1016 bp (1016 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ636009
> BS07851.complete
GAAGTTATCAGTCGACATGGAGCTGCTGCAGGCCCTCTGCTGTACGCTGC
TCCTGCTTTTGGCCCGGATGCAAGTTCTGCTTGCCGTCAGTTGGGAGGAT
TGGTGGACATACGATGGCATCTCAGGACCTGCCTTTTGGGGCCTCATCAA
TCCGGAGTGGTCGCTCTGCAACAAGGGTCGTCGCCAATCGCCGGTCAATC
TGGAACCCCAACGCCTGCTATTTGATCCCAACTTGAGGCCCATGCACATA
GACAAGCACAGGATATCCGGATTGATCACTAATACGGGCCACAGCGTCAT
CTTTACGGCCGGCAATGATACGGTGGCCAACTACGACGGTATGCAGACGC
CAGTGAATATATCGGGCGGACCGTTGTCGTATCGCTACCGTTTCCACGAG
ATCCACATGCACTACGGATTGAACGACCAATTTGGATCGGAGCACAGTGT
CGAGGGCTATACGTTCCCGGCGGAGATACAAATATTCGGCTACAATTCCC
AGCTGTATGCAAATTTCTCAGATGCCCTCAATCGCGCCCAGGGCATCGTC
GGTGTCTCCATTCTGCTGCAGCTTGGAGATCTCTCGAATGCGGAGCTGCG
CATGCTCACCGATCAGCTGGAGCGCATTCGCTATGGCGGCGATGAGGCCT
TCGTTAAGCGTCTCTCCATCCGCGGACTGCTACCGGACACGGATCACTAT
ATGACCTACGATGGATCCACAACGGCACCTGCCTGCCACGAAACAGTCAC
CTGGGTGGTGCTCAACAAGCCCATCTACATCACAAAGCAACAGTTGCACG
CCCTGCGCCGCCTGATGCAGGGCAGTCCAGACCACCCGAAAGCGCCCCTG
GGCAACAATTACCGGCCGCCCCAGCCGCTCCTGCACCGGCCCATTCGCAC
CAATATTGATTTCAAGACGACGAAGTCGAACGGCAAGGCCGCCTGCCCCA
CCATGTACCGCGAGGTCTACTATAAAGCGACCAGTTGGAAACAGAACTAG
AAGCTTTCTAGACCAT
BS07851.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:36:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32698-RD | 984 | CG32698-PD | 1..984 | 17..1000 | 4920 | 100 | Plus |
| CG32698-RB | 984 | CG32698-PB | 1..984 | 17..1000 | 4920 | 100 | Plus |
| CG32698-RC | 984 | CG32698-PC | 1..984 | 17..1000 | 4920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:36:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32698-RD | 1775 | CG32698-RD | 489..1475 | 17..1003 | 4935 | 100 | Plus |
| CG32698-RB | 2007 | CG32698-RB | 721..1707 | 17..1003 | 4935 | 100 | Plus |
| CG32698-RC | 8207 | CG32698-RC | 698..1684 | 17..1003 | 4935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:36:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9845957..9846180 | 570..793 | 1120 | 100 | Plus |
| X | 23542271 | X | 9836593..9836806 | 262..475 | 1070 | 100 | Plus |
| X | 23542271 | X | 9848528..9848715 | 790..977 | 940 | 100 | Plus |
| X | 23542271 | X | 9836310..9836450 | 122..262 | 705 | 100 | Plus |
| X | 23542271 | X | 9845699..9845796 | 474..571 | 490 | 100 | Plus |
| X | 23542271 | X | 9812099..9812156 | 17..74 | 290 | 100 | Plus |
| X | 23542271 | X | 9832490..9832543 | 73..126 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:36:32 has no hits.
BS07851.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:05:41 Download gff for
BS07851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-RA | 1..984 | 17..1000 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:43:31 Download gff for
BS07851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-RA | 460..1443 | 17..1000 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:29 Download gff for
BS07851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-RA | 476..1459 | 17..1000 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:05:42 Download gff for
BS07851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-RA | 460..1450 | 17..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:14:44 Download gff for
BS07851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32698-RC | 698..1681 | 17..1000 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:14:44 Download gff for
BS07851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9812099..9812156 | 17..74 | 100 | -> | Plus |
| X | 9832492..9832542 | 75..125 | 100 | -> | Plus |
| X | 9836314..9836450 | 126..262 | 100 | -> | Plus |
| X | 9836594..9836806 | 263..475 | 100 | -> | Plus |
| X | 9845701..9845796 | 476..571 | 100 | -> | Plus |
| X | 9845959..9846180 | 572..793 | 100 | -> | Plus |
| X | 9848532..9848715 | 794..977 | 100 | -> | Plus |
| X | 9848901..9848923 | 978..1000 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:29 Download gff for
BS07851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9706132..9706189 | 17..74 | 100 | -> | Plus |
| arm_X | 9726525..9726575 | 75..125 | 100 | -> | Plus |
| arm_X | 9730347..9730483 | 126..262 | 100 | -> | Plus |
| arm_X | 9730627..9730839 | 263..475 | 100 | -> | Plus |
| arm_X | 9739734..9739829 | 476..571 | 100 | -> | Plus |
| arm_X | 9739992..9740213 | 572..793 | 100 | -> | Plus |
| arm_X | 9742565..9742748 | 794..977 | 100 | -> | Plus |
| arm_X | 9742934..9742956 | 978..1000 | 100 | | Plus |
BS07851.pep Sequence
Translation from 16 to 999
> BS07851.pep
MELLQALCCTLLLLLARMQVLLAVSWEDWWTYDGISGPAFWGLINPEWSL
CNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGLITNTGHSVIFTAGN
DTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTF
PAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQ
LERIRYGGDEAFVKRLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLN
KPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQPLLHRPIRTNIDFK
TTKSNGKAACPTMYREVYYKATSWKQN*
BS07851.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:41:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32698-PD | 327 | CG32698-PD | 1..327 | 1..327 | 1766 | 100 | Plus |
| CG32698-PB | 327 | CG32698-PB | 1..327 | 1..327 | 1766 | 100 | Plus |
| CG32698-PC | 327 | CG32698-PC | 1..327 | 1..327 | 1766 | 100 | Plus |
| CG32698-PA | 327 | CG32698-PA | 1..327 | 1..327 | 1766 | 100 | Plus |
| CG1402-PC | 333 | CG1402-PC | 18..324 | 7..324 | 1023 | 55.7 | Plus |
