Clone BS07869 Report

Search the DGRC for BS07869

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:78
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG17323-RA
Protein status:BS07869.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07869.3prime Sequence

913 bp (796 high quality bases) assembled on 2006-01-06

> BS07869.3prime
ATGGTCTAGAAAGCTTCTAATCCTTCTTAGTCTTCTGGGCGGCACTGGAT
CCGCAACAGAGTCGAAGGAGCCACACCCAACTGGCAATGATGCTGCCCAG
GACGAGGGCCAACACGGCATAGACATCCAGGGAGTAGTAAACGAATCGTG
ACATCTCGACGGCACTGGGCTTCAACAGAGGAGCTCCGCCAGTGTGGGCC
ACATGCTCCACCCACCAAATGGCTGTATGCAGGGCCTGCTGTGGGCGGTG
GTGGAACGAGTGGGAGACTACTTTGGCAGCATCGTGGAACTTTTTGTCCA
AAGCCTTCTTTAGTGCCCTCATCACCGTGTTTTCGCCTATATCCTCGAAA
TTCAGGATAGTTCCCATGCCTCGCTCGACCAAAGCGGCCGTATTGACAAA
CTGATCGCCATACATGGGCGTCGCAACCACTGGGACTCCACAGTAAGCTG
CCTCCGAGGTGCCCATGAGTCCGCCGTGGGACATGAACACCTTGACGTTG
GGATGGCAGAGGATATCGCGTTGTGGCAACCACTTCATAATGTGCATGTT
GGGTGGCTGGTTAGGCAGTGTTTCGTTTTCCCATTTCCAGATAACCTTCT
GCTTTAATCGAGCCACCGCCCGAATAATGCCATCCCTTTTCGCCGCCGAC
AGGGAATTCGCCCGGATCATTGATCCCCAACTAATCAGGATCACTCCTTC
CTCAGCATTGTCCAGAATGCGCTGCAGATCGGCAGGCAGAGGCTTCGATT
TCTGGATGTGGATGCCACCCAGCTCGATGACATTGGGCGGCGTTACCTTG
GGTCCAGACAGCGAGTAGTGCTGGTTCACAAAGAACATGGATGTGTTCTT
CACCAGCTCGCCCACCGAAAGCACGTCATGGCCGAATTTGTACTGAACCA
TGGCGTCGGCAGC

BS07869.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:57:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG17323-PA 1560 CG17323-RA 664..1560 913..17 4460 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:08:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG17323-RD 2212 CG17323-RD 803..1699 913..17 4470 99.9 Minus
CG17323-RC 1988 CG17323-RC 742..1638 913..17 4470 99.9 Minus
CG17323-RE 2112 CG17323-RE 866..1762 913..17 4470 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 20:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18825250..18825874 913..289 3110 99.8 Minus
2L 23513712 2L 18825930..18826203 290..17 1370 100 Minus
2L 23513712 2L 18828272..18828425 603..450 245 77.3 Minus
Blast to na_te.dros performed on 2015-02-02 20:08:09 has no hits.

BS07869.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:26:19 Download gff for BS07869.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17323-PA 664..1560 17..913 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:21:17 Download gff for BS07869.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17323-PA 664..1560 17..913 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:02:52 Download gff for BS07869.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17323-RE 866..1764 12..913 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:13:38 Download gff for BS07869.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17323-RE 866..1764 12..913 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:13:38 Download gff for BS07869.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 18825250..18825872 291..913 99 -> Minus
2L 18825930..18826205 12..290 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:02:52 Download gff for BS07869.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18825250..18825872 291..913 99 -> Minus
arm_2L 18825930..18826205 12..290 98   Minus

BS07869.5prime Sequence

907 bp (857 high quality bases) assembled on 2006-01-06

> BS07869.5prime
GAAGTTATCAGTCGACATGTGGTCGCCGCGGGTTGCCCTACTTTTCCTGG
CCCTAGCACTTAGCCAACCGGACGAGTTGGTGGAGGCCGCTGGTCCGCTG
AAGGTGCTGGGTCTTTTTCCCCATCCCGGAGTTAGCCACTTCCACTTCTT
CCACCCCATCATGAAGGGTCTGGCCGAGGCGGGTCATGACGTGAGCGTGG
TTTCCCACTTCCCGGACAAGCATCCGGTTGCCCACTACAAGGATTTCCCC
CTCACCGGAATGGACAAGCTCACGAACAGTGTTGATCTCAAGTTTTTCGA
GAAGCGCACATTCTACAGTCACTTCCAGGAGTTCTTCCTGCTGTACGACT
GGGGCAAACAGACATGCAACCTGACGCTCCGTTCGGAAGCACTGCAGCAG
ATCCTCAGGCGTCCGGGACGCTTTGATGTGATCATCATGGAGCAATTCAA
CACTGACTGCATGATGGGAGTGGCCCACCAGCTCCAGGCGCCGGTGATCG
CCTTGAGCAGCTGTGTGATGATGCCCTGGCACTACGAGCGAATGGGAGCT
CCTTTGATACCCTCTCACATCCCGGCGCTCTTCATGGCCCAGTCGCAGCA
CATGAACTTTGGGGGACGACTGGCCAATTGGTTCAGCACCCACGCCTTAA
ATTGGATGTACAAATTACTATCGGTTCCCGCTGCCGACGCCATGGTTCAG
TACAAATTCGGCCATGACGTGCCTTCGGTGGGCGAGCTGGTGAAGAACAC
ATCCATGTTCTTTGTGAACCAGCACTACTCGCTGTCTGGACCCAAGGTAA
CGCCGCCCAATGTCATCGAGCTGGGTGGCATCCACATCCAGAAATCGAAG
CCTCTGCCCTGCGATCTGCAGCGCATTCTGGACAATGCTGAGGAAGGAGT
GATCCTG

BS07869.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:57:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG17323-PA 1560 CG17323-RA 1..842 17..858 4210 100 Plus
CG17323-PA 1560 CG17323-RA 846..891 862..907 230 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:56:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG17323-RD 2212 CG17323-RD 140..1030 17..907 4410 99.8 Plus
CG17323-RC 1988 CG17323-RC 79..969 17..907 4410 99.8 Plus
CG17323-RE 2112 CG17323-RE 203..1093 17..907 4410 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:56:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18824795..18825167 291..663 1865 100 Plus
2L 23513712 2L 18824306..18824581 17..292 1380 100 Plus
2L 23513712 2L 18825234..18825477 664..907 1175 98.8 Plus
Blast to na_te.dros performed on 2015-02-11 11:56:36 has no hits.

BS07869.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:26:20 Download gff for BS07869.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17323-PA 1..891 17..907 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:21:19 Download gff for BS07869.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17323-PA 1..891 17..907 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:19:42 Download gff for BS07869.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17323-RE 203..1093 17..907 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:21:00 Download gff for BS07869.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17323-RE 203..1093 17..907 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:21:00 Download gff for BS07869.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18824306..18824581 17..292 100 -> Plus
2L 18824797..18825167 293..663 100 -> Plus
2L 18825234..18825477 664..907 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:19:42 Download gff for BS07869.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18824306..18824581 17..292 100 -> Plus
arm_2L 18824797..18825167 293..663 100 -> Plus
arm_2L 18825234..18825477 664..907 99   Plus

BS07869.complete Sequence

1592 bp (1592 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ636015

> BS07869.complete
GAAGTTATCAGTCGACATGTGGTCGCCGCGGGTTGCCCTACTTTTCCTGG
CCCTAGCACTTAGCCAACCGGACGAGTTGGTGGAGGCCGCTGGTCCGCTG
AAGGTGCTGGGTCTTTTTCCCCATCCCGGAGTTAGCCACTTCCACTTCTT
CCACCCCATCATGAAGGGTCTGGCCGAGGCGGGTCATGACGTGAGCGTGG
TTTCCCACTTCCCGGACAAGCATCCGGTTGCCCACTACAAGGATTTCCCC
CTCACCGGAATGGACAAGCTCACGAACAGTGTTGATCTCAAGTTTTTCGA
GAAGCGCACATTCTACAGTCACTTCCAGGAGTTCTTCCTGCTGTACGACT
GGGGCAAACAGACATGCAACCTGACGCTCCGTTCGGAAGCACTGCAGCAG
ATCCTCAGGCGTCCGGGACGCTTTGATGTGATCATCATGGAGCAATTCAA
CACTGACTGCATGATGGGAGTGGCCCACCAGCTCCAGGCGCCGGTGATCG
CCTTGAGCAGCTGTGTGATGATGCCCTGGCACTACGAGCGAATGGGAGCT
CCTTTGATACCCTCTCACATCCCGGCGCTCTTCATGGCCCAGTCGCAGCA
CATGAACTTTGGGGGACGACTGGCCAATTGGTTCAGCACCCACGCCTTAA
ATTGGATGTACAAATTACTATCGGTTCCCGCTGCCGACGCCATGGTTCAG
TACAAATTCGGCCATGACGTGCCTTCGGTGGGCGAGCTGGTGAAGAACAC
ATCCATGTTCTTTGTGAACCAGCACTACTCGCTGTCTGGACCCAAGGTAA
CGCCGCCCAATGTCATCGAGCTGGGTGGCATCCACATCCAGAAATCGAAG
CCTCTGCCTGCCGATCTGCAGCGCATTCTGGACAATGCTGAGGAAGGAGT
GATCCTGATTAGTTGGGGATCAATGATCCGGGCGAATTCCCTGTCGGCGG
CGAAAAGGGATGGCATTATTCGGGCGGTGGCTCGATTAAAGCAGAAGGTT
ATCTGGAAATGGGAAAACGAAACACTGCCTAACCAGCCACCCAACATGCA
CATTATGAAGTGGTTGCCACAACGCGATATCCTCTGCCATCCCAACGTCA
AGGTGTTCATGTCCCACGGCGGACTCATGGGCACCTCGGAGGCAGCTTAC
TGTGGAGTCCCAGTGGTTGCGACGCCCATGTATGGCGATCAGTTTGTCAA
TACGGCCGCTTTGGTCGAGCGAGGCATGGGAACTATCCTGAATTTCGAGG
ATATAGGCGAAAACACGGTGATGAGGGCACTAAAGAAGGCTTTGGACAAA
AAGTTCCACGATGCTGCCAAAGTAGTCTCCCACTCGTTCCACCACCGCCC
ACAGCAGGCCCTGCATACAGCCATTTGGTGGGTGGAGCATGTGGCCCACA
CTGGCGGAGCTCCTCTGTTGAAGCCCAGTGCCGTCGAGATGTCACGATTC
GTTTACTACTCCCTGGATGTCTATGCCGTGTTGGCCCTCGTCCTGGGCAG
CATCATTGCCAGTTGGGTGTGGCTCCTTCGACTCTGTTGCGGATCCAGTG
CCGCCCAGAAGACTAAGAAGGATTAGAAGCTTTCTAGACCAT

BS07869.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:19:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG17323-RD 1560 CG17323-PD 1..1560 17..1576 7800 100 Plus
CG17323-RC 1560 CG17323-PC 1..1560 17..1576 7800 100 Plus
CG17323-RE 1560 CG17323-PE 1..1560 17..1576 7800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:19:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG17323-RD 2212 CG17323-RD 140..1699 17..1576 7800 100 Plus
CG17323-RC 1988 CG17323-RC 79..1638 17..1576 7800 100 Plus
CG17323-RE 2112 CG17323-RE 203..1762 17..1576 7800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:19:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18825234..18825874 664..1304 3205 100 Plus
2L 23513712 2L 18824795..18825167 291..663 1865 100 Plus
2L 23513712 2L 18824306..18824581 17..292 1380 100 Plus
2L 23513712 2L 18825930..18826203 1303..1576 1370 100 Plus
2L 23513712 2L 18828272..18828425 990..1143 245 77.3 Plus
Blast to na_te.dros performed on 2014-11-27 10:19:06 has no hits.

BS07869.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:05:33 Download gff for BS07869.complete
Subject Subject Range Query Range Percent Splice Strand
CG17323-RA 1..1560 17..1576 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:44:08 Download gff for BS07869.complete
Subject Subject Range Query Range Percent Splice Strand
CG17323-RA 31..1592 17..1581 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:37:52 Download gff for BS07869.complete
Subject Subject Range Query Range Percent Splice Strand
CG17323-RE 203..1762 17..1576 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:05:33 Download gff for BS07869.complete
Subject Subject Range Query Range Percent Splice Strand
CG17323-RA 31..1592 17..1581 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:18:40 Download gff for BS07869.complete
Subject Subject Range Query Range Percent Splice Strand
CG17323-RE 203..1762 17..1576 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:18:40 Download gff for BS07869.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18824306..18824581 17..292 100 -> Plus
2L 18825930..18826203 1303..1576 100   Plus
2L 18824797..18825167 293..663 100 -> Plus
2L 18825234..18825872 664..1302 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:37:52 Download gff for BS07869.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18824306..18824581 17..292 100 -> Plus
arm_2L 18824797..18825167 293..663 100 -> Plus
arm_2L 18825234..18825872 664..1302 100 -> Plus
arm_2L 18825930..18826203 1303..1576 100   Plus

BS07869.pep Sequence

Translation from 16 to 1575

> BS07869.pep
MWSPRVALLFLALALSQPDELVEAAGPLKVLGLFPHPGVSHFHFFHPIMK
GLAEAGHDVSVVSHFPDKHPVAHYKDFPLTGMDKLTNSVDLKFFEKRTFY
SHFQEFFLLYDWGKQTCNLTLRSEALQQILRRPGRFDVIIMEQFNTDCMM
GVAHQLQAPVIALSSCVMMPWHYERMGAPLIPSHIPALFMAQSQHMNFGG
RLANWFSTHALNWMYKLLSVPAADAMVQYKFGHDVPSVGELVKNTSMFFV
NQHYSLSGPKVTPPNVIELGGIHIQKSKPLPADLQRILDNAEEGVILISW
GSMIRANSLSAAKRDGIIRAVARLKQKVIWKWENETLPNQPPNMHIMKWL
PQRDILCHPNVKVFMSHGGLMGTSEAAYCGVPVVATPMYGDQFVNTAALV
ERGMGTILNFEDIGENTVMRALKKALDKKFHDAAKVVSHSFHHRPQQALH
TAIWWVEHVAHTGGAPLLKPSAVEMSRFVYYSLDVYAVLALVLGSIIASW
VWLLRLCCGSSAAQKTKKD*

BS07869.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG17323-PD 519 CG17323-PD 1..519 1..519 2768 100 Plus
CG17323-PC 519 CG17323-PC 1..519 1..519 2768 100 Plus
CG17323-PE 519 CG17323-PE 1..519 1..519 2768 100 Plus
CG17323-PA 519 CG17323-PA 1..519 1..519 2768 100 Plus
CG17322-PB 517 CG17322-PB 7..502 9..506 1570 59.8 Plus