Clone Sequence Records
BS07888.5prime Sequence
495 bp (494 high quality bases) assembled on 2006-01-06
> BS07888.5prime
GAAGTTATCAGTCGACATGTCGCGCAGCGTGCGGGCGGAGACGCGCAGCC
GGGCGAAGGATGACATCAAGCGGGTGATGCAGGCGGTGGACAAGGTGCGC
CACTGGGAGAAGAAGTGGGTGACCATCAGCGACACCACCATGAAAATCTA
CAAATGGGTGCCCATCGCCTCCGCCAGTGAGAAGAAGGCCAAGCTGGAGT
CCTCGCCGGGATCGGCTGCTGTCCGGAGACCGCCCCCCGGCTCGGGCGTT
ACGCCGGTCGGCGGCAGCAAGAGCGATAAGGAGAACTCTCAGAAGGGCAC
GCCCACGCCGCCGCAGATCACGCCCAGCTACCAGGGACTAACCGCCGAGG
ACTCTAACACCTGTTTCTCCGTCGTGTCCGACAGCCAGGGCGCCGACTTC
GTGTCGAGTATGCCCTTCTCTGAGGACTCGAACTCGCAGGGCAGCGATGG
ACCCGTGAAGCGATTGAAGACGAGCGACTAGAAGCTTTCTAGACC
BS07888.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:57:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17252-PA | 465 | BCL7-like-RA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 10:57:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
BCL7-like-RA | 1664 | CG17252-RA | 284..751 | 14..481 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 10:57:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9356917..9357267 | 14..364 | 1755 | 100 | Plus |
X | 23542271 | X | 9357563..9357681 | 363..481 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 10:57:41 has no hits.
BS07888.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:27:00 Download gff for
BS07888.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17252-PA | 1..465 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:22:11 Download gff for
BS07888.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17252-PA | 1..465 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:34:45 Download gff for
BS07888.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BCL7-like-RA | 280..761 | 9..489 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:43:25 Download gff for
BS07888.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BCL7-like-RA | 280..761 | 9..489 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:43:25 Download gff for
BS07888.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9356913..9357265 | 9..362 | 99 | -> | Plus |
X | 9357563..9357691 | 363..489 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:34:45 Download gff for
BS07888.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9250946..9251298 | 9..362 | 99 | -> | Plus |
arm_X | 9251596..9251724 | 363..489 | 96 | | Plus |
BS07888.3prime Sequence
495 bp (494 high quality bases) assembled on 2006-01-06
> BS07888.3prime
ATGGTCTAGAAAGCTTCTAGTCGCTCGTCTTCAATCGCTTCACGGGTCCA
TCGCTGCCCTGCGAGTTCGAGTCCTCAGAGAAGGGCATACTCGACACGAA
GTCGGCGCCCTGGCTGTCGGACACGACGGAGAAACAGGTGTTAGAGTCCT
CGGCGGTTAGTCCCTGGTAGCTGGGCGTGATCTGCGGCGGCGTGGGCGTG
CCCTTCTGAGAGTTCTCCTTATCGCTCTTGCTGCCGCCGACCGGCGTAAC
GCCCGAGCCGGGGGGCGGTCTCCGGACAGCAGCCGATCCCGGCGAGGACT
CCAGCTTGGCCTTCTTCTCACTGGCGGAGGCGATGGGCACCCATTTGTAG
ATTTTCATGGTGGTGTCGCTGATGGTCACCCACTTCTTCTCCCAGTGGCG
CACCTTGTCCACCGCCTGCATCACCCGCTTGATGTCATCCTTCGCCCGGC
TGCGCGTCTCCGCCCGCACGCTGCGCGACATGTCGACTGATAACT
BS07888.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:57:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17252-PA | 465 | BCL7-like-RA | 1..465 | 481..17 | 2325 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:43:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
BCL7-like-RA | 1664 | CG17252-RA | 284..751 | 484..17 | 2340 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:43:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9356917..9357267 | 484..134 | 1755 | 100 | Minus |
X | 23542271 | X | 9357563..9357681 | 135..17 | 595 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:43:06 has no hits.
BS07888.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:26:59 Download gff for
BS07888.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17252-PA | 1..465 | 17..481 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:22:09 Download gff for
BS07888.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17252-PA | 1..465 | 17..481 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:46:16 Download gff for
BS07888.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BCL7-like-RA | 280..761 | 9..489 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:15:25 Download gff for
BS07888.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BCL7-like-RA | 280..761 | 9..489 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:15:25 Download gff for
BS07888.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9356913..9357265 | 136..489 | 99 | -> | Minus |
X | 9357563..9357691 | 9..135 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:46:16 Download gff for
BS07888.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9250946..9251298 | 136..489 | 99 | -> | Minus |
arm_X | 9251596..9251724 | 9..135 | 96 | | Minus |
BS07888.complete Sequence
497 bp (497 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ636024
> BS07888.complete
GAAGTTATCAGTCGACATGTCGCGCAGCGTGCGGGCGGAGACGCGCAGCC
GGGCGAAGGATGACATCAAGCGGGTGATGCAGGCGGTGGACAAGGTGCGC
CACTGGGAGAAGAAGTGGGTGACCATCAGCGACACCACCATGAAAATCTA
CAAATGGGTGCCCATCGCCTCCGCCAGTGAGAAGAAGGCCAAGCTGGAGT
CCTCGCCGGGATCGGCTGCTGTCCGGAGACCGCCCCCCGGCTCGGGCGTT
ACGCCGGTCGGCGGCAGCAAGAGCGATAAGGAGAACTCTCAGAAGGGCAC
GCCCACGCCGCCGCAGATCACGCCCAGCTACCAGGGACTAACCGCCGAGG
ACTCTAACACCTGTTTCTCCGTCGTGTCCGACAGCCAGGGCGCCGACTTC
GTGTCGAGTATGCCCTTCTCTGAGGACTCGAACTCGCAGGGCAGCGATGG
ACCCGTGAAGCGATTGAAGACGAGCGACTAGAAGCTTTCTAGACCAT
BS07888.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:38:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
BCL7-like-RA | 465 | CG17252-PA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:38:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
BCL7-like-RA | 1664 | CG17252-RA | 284..751 | 14..481 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:37:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9356917..9357267 | 14..364 | 1755 | 100 | Plus |
X | 23542271 | X | 9357563..9357681 | 363..481 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:37:59 has no hits.
BS07888.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:44:56 Download gff for
BS07888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BCL7-like-RA | 1..465 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:32:12 Download gff for
BS07888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BCL7-like-RA | 268..749 | 9..489 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:00 Download gff for
BS07888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BCL7-like-RA | 287..751 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:44:56 Download gff for
BS07888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BCL7-like-RA | 268..749 | 9..489 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:23:05 Download gff for
BS07888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BCL7-like-RA | 287..751 | 17..481 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:23:05 Download gff for
BS07888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9356920..9357265 | 17..362 | 100 | -> | Plus |
X | 9357563..9357681 | 363..481 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:00 Download gff for
BS07888.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9250953..9251298 | 17..362 | 100 | -> | Plus |
arm_X | 9251596..9251714 | 363..481 | 100 | | Plus |
BS07888.pep Sequence
Translation from 16 to 480
> BS07888.pep
MSRSVRAETRSRAKDDIKRVMQAVDKVRHWEKKWVTISDTTMKIYKWVPI
ASASEKKAKLESSPGSAAVRRPPPGSGVTPVGGSKSDKENSQKGTPTPPQ
ITPSYQGLTAEDSNTCFSVVSDSQGADFVSSMPFSEDSNSQGSDGPVKRL
KTSD*
BS07888.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:09:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
BCL7-like-PA | 154 | CG17252-PA | 1..154 | 1..154 | 794 | 100 | Plus |