Clone Sequence Records
BS07889.3prime Sequence
967 bp (818 high quality bases) assembled on 2006-01-06
> BS07889.3prime
ATGGTCTAGAAAGCTTCTACAACTCAAAGAAGTCGTCCTGCTGCTTCTCC
AGCCGCTTCAGCGAATTCTGGACTCGTCGCGTCTGCGTCGTGTTCAGCAG
GTGCGCCGTATCCGAGGAGTTCCCGCTGCCCGTCGAGCTGTGGCGCTGAT
ACTGCGACGGACGGTCGTTGTTGTTGGTCTTGTAGGAGTTGTTCAGCGGA
TGGCGGCGCTGCGGGAAAACGTCGGCGGTGGCACTGATGCAGATGTCCGC
ATCACTCTGACTGCTGACCAGGTCCTTAGAGCGCTCCACATATTTGCGCG
ACTCAGAAATGGTGTTGTCTATCTTGTTAAGGAAGTCGTTCATGCATTTC
CTGTTCTCCTCCTCGGGCGTCATTGCGGCCACCGAGTCCAGGCTCTTGCT
CTGCTTGCCGCTGCAACCACCGTGGCCGTGCATCATCGATGGATCCTCGT
CGCCGGCCTGCACCACCAGCAGCTCCCCGGCAATGGAGTAGGGACGTTGT
GGGGGCTGTTGCTGCTGCTGCTGTTGGTTGCCGCCGGAACGCGATCCTCC
GGAAATGGGGCCGGTGCCACTTGTGTTGCAGCTGCTGCTGCTCCCACTGC
TGCTGCTGCTACTGCTGCTGCTGATGTCGTTGCTCTTCATGAAGCTCTTG
TTGCTCTGGCTCAGATTATTGGCATTGTTGTGCGCCTCCCGCTGTCCATT
GGCATCCGGAGTGCCCGGTGGCGTGGCCAGCACGGCGTCGAAAGCGGCTA
TCGAATCGCCAGGCACCTGGGGATAGTACGGTGAGTTCTTCTCCACTGGA
ACGAGGAGAAACTGACGCAGGAACAGGCTGTCCGAGGCGAAGAGGCGGTT
GGCCCGTCTTATTTGCTCCGTCGTGCAGCCGTACTTGAGGGCGATGCCCT
GCAGCGTGTCCGTCTTCTCGACGATGTGCCGGAATGAGGGTCTCATTTGT
TCCGGAGGCTGTTGCAG
BS07889.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:57:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12207-PB | 1101 | CG12207-RB | 185..1101 | 933..17 | 4585 | 100 | Minus |
CG12207-PC | 1101 | CG12207-RC | 185..1101 | 933..17 | 4585 | 100 | Minus |
CG12207-PA | 1032 | CG12207-RA | 116..1032 | 933..17 | 4585 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:22:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12207-RG | 2535 | CG12207-RG | 794..1742 | 967..17 | 4705 | 99.8 | Minus |
CG12207-RF | 2113 | CG12207-RF | 372..1320 | 967..17 | 4705 | 99.8 | Minus |
CG12207-RE | 1927 | CG12207-RE | 186..1134 | 967..17 | 4705 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 20:22:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14300419..14301018 | 872..273 | 3000 | 100 | Minus |
3R | 32079331 | 3R | 14301228..14301483 | 272..17 | 1280 | 100 | Minus |
3R | 32079331 | 3R | 14298894..14298987 | 967..872 | 380 | 97.9 | Minus |
Blast to na_te.dros performed 2015-02-02 20:22:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6899 | 661..496 | 319 | 68.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6893 | 659..496 | 275 | 66.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6796..6956 | 681..514 | 220 | 61.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2300..2449 | 639..484 | 216 | 63.7 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1062..1157 | 592..493 | 165 | 67 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6824 | 611..496 | 161 | 64.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6414..6563 | 646..496 | 149 | 58.2 | Minus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 849..1005 | 662..496 | 146 | 58.3 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2450..2661 | 695..493 | 138 | 56.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2394 | 591..496 | 130 | 64.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6779 | 536..496 | 120 | 79.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6800 | 536..496 | 120 | 79.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2842 | 582..489 | 115 | 59.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2376 | 533..493 | 111 | 76.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6758 | 528..496 | 111 | 81.8 | Minus |
BS07889.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:27:01 Download gff for
BS07889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-PB | 153..1101 | 17..967 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:22:12 Download gff for
BS07889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-PA | 84..1032 | 17..967 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 18:03:49 Download gff for
BS07889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RD | 317..1265 | 17..967 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 21:15:11 Download gff for
BS07889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RE | 186..1134 | 17..967 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 21:15:11 Download gff for
BS07889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14298894..14298987 | 872..967 | 97 | -> | Minus |
3R | 14300420..14301018 | 273..871 | 100 | -> | Minus |
3R | 14301228..14301483 | 17..272 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 18:03:49 Download gff for
BS07889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 10124616..10124709 | 872..967 | 97 | -> | Minus |
arm_3R | 10126142..10126740 | 273..871 | 100 | -> | Minus |
arm_3R | 10126950..10127205 | 17..272 | 100 | | Minus |
BS07889.5prime Sequence
899 bp (769 high quality bases) assembled on 2006-01-06
> BS07889.5prime
GAAGTTATCAGTCGACATGGATTACATTGTGAAGGCCTACAAGGATTGGA
AACTGCATTCGCAGTTTCAAGAGATCGTCCCCGACATGGATGACTCGGAA
TTCATGTTCAACGAGAAGCAATCGATCCGGGACTCCGGGCGCACCCTCAA
GCGCTACGGGAGCACCTGCTGCAACAGCCTCCGGAACAATGAGACCCTCA
TCCGGCACATCGTCGAGAAGACGGACACGCTGCAGGGCATCGCCCTCAAG
TACGGCTGCACGACGGAGCAAATAAGACGGGCCAACCGCCTCTTCGCCTC
GGACAGCCTGTTCCTGCGTCAGTTTCTCCTCGTTCCAGTGGAGAAGAACT
CACCGTACTATCCCCAGGTGCCTGGCGATTCGATAGCCGCTTTCGACGCC
GTGCTGGCCACGCCACCGGGCACTCCGGATGCCAATGGACAGCGGGAGGC
GCACAACAATGCCAATAATCTGAGCCAGAGCAACAAGAGCTTCATGAAGA
GCAACGACATCAGCAGCAGCAGTAGCAGCAGCAGCAGTGGGAGCAGCAGC
AGCTGCAACACAAGTGGCACCGGCCCCATTTCCGGAGGATCGCGTTCCGG
CGGCAACCAACAGCAGCAGCAGCAACAGCCCCCACAACGTCCCTACTCCA
TTGCCGGGGAGCTGCTGGTGGTGCAGGCCGGCGACGAGGATCCATCGATG
ATGCACGGCCACGGTGGTTGCAGCGGCAAGCAGAGCAAGAGCCTGGACTC
GGTGGCCGCAATGACGCCCGAGGAGGAGAACAGGAAATGCATGAACGACT
TCCCTTACAAGATAGACAACACCATTTCTGAGTCGCGCAAATATGTGGAG
CGCTCTAAGGACCTGGTCAGCAGTCAGAGTGATGCGGACATCTGCATCA
BS07889.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:57:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12207-PB | 1101 | CG12207-RB | 1..883 | 17..899 | 4365 | 99.7 | Plus |
CG12207-PC | 1101 | CG12207-RC | 1..883 | 17..899 | 4365 | 99.7 | Plus |
CG12207-PA | 1032 | CG12207-RA | 1..814 | 86..899 | 4020 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:24:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12207-RG | 2535 | CG12207-RG | 642..1524 | 17..899 | 4385 | 99.8 | Plus |
CG12207-RF | 2113 | CG12207-RF | 220..1102 | 17..899 | 4385 | 99.8 | Plus |
CG12207-RC | 1997 | CG12207-RC | 104..986 | 17..899 | 4385 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:24:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14300419..14301018 | 262..861 | 2970 | 99.7 | Plus |
3R | 32079331 | 3R | 14298786..14298987 | 61..262 | 1010 | 100 | Plus |
3R | 32079331 | 3R | 14290773..14290820 | 17..64 | 240 | 100 | Plus |
3R | 32079331 | 3R | 14301228..14301265 | 862..899 | 190 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 09:24:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6899 | 473..638 | 319 | 68.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6893 | 475..638 | 275 | 66.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6796..6956 | 453..620 | 220 | 61.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2300..2449 | 495..650 | 216 | 63.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1062..1157 | 542..641 | 165 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6824 | 523..638 | 161 | 64.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6414..6563 | 488..638 | 149 | 58.2 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 849..1005 | 472..638 | 146 | 58.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2450..2661 | 439..641 | 138 | 56.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2394 | 543..638 | 130 | 64.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6779 | 598..638 | 120 | 79.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6800 | 598..638 | 120 | 79.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2842 | 552..645 | 115 | 59.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2376 | 601..641 | 111 | 76.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6758 | 606..638 | 111 | 81.8 | Plus |
BS07889.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:27:02 Download gff for
BS07889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-PB | 1..882 | 17..898 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:22:13 Download gff for
BS07889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-PC | 1..882 | 17..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:09:02 Download gff for
BS07889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RB | 419..1303 | 14..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:43:41 Download gff for
BS07889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RC | 101..985 | 14..898 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:43:41 Download gff for
BS07889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14290770..14290820 | 14..64 | 98 | -> | Plus |
3R | 14298790..14298987 | 65..262 | 100 | -> | Plus |
3R | 14300420..14301018 | 263..861 | 99 | -> | Plus |
3R | 14301228..14301264 | 862..898 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:09:02 Download gff for
BS07889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 10116492..10116542 | 14..64 | 98 | -> | Plus |
arm_3R | 10124512..10124709 | 65..262 | 100 | -> | Plus |
arm_3R | 10126142..10126740 | 263..861 | 99 | -> | Plus |
arm_3R | 10126950..10126986 | 862..898 | 100 | | Plus |
BS07889.complete Sequence
1133 bp (1133 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ636025
> BS07889.complete
GAAGTTATCAGTCGACATGGATTACATTGTGAAGGCCTACAAGGATTGGA
AACTGCATTCGCAGTTTCAAGAGATCGTCCCCGACATGGATGACTCGGAA
TTCATGTTCAACGAGAAGCAATCGATCCGGGACTCCGGGCGCACCCTCAA
GCGCTACGGGAGCACCTGCTGCAACAGCCTCCGGAACAATGAGACCCTCA
TCCGGCACATCGTCGAGAAGACGGACACGCTGCAGGGCATCGCCCTCAAG
TACGGCTGCACGACGGAGCAAATAAGACGGGCCAACCGCCTCTTCGCCTC
GGACAGCCTGTTCCTGCGTCAGTTTCTCCTCGTTCCAGTGGAGAAGAACT
CACCGTACTATCCCCAGGTGCCTGGCGATTCGATAGCCGCTTTCGACGCC
GTGCTGGCCACGCCACCGGGCACTCCGGATGCCAATGGACAGCGGGAGGC
GCACAACAATGCCAATAATCTGAGCCAGAGCAACAAGAGCTTCATGAAGA
GCAACGACATCAGCAGCAGCAGTAGCAGCAGCAGCAGTGGGAGCAGCAGC
AGCTGCAACACAAGTGGCACCGGCCCCATTTCCGGAGGATCGCGTTCCGG
CGGCAACCAACAGCAGCAGCAGCAACAGCCCCCACAACGTCCCTACTCCA
TTGCCGGGGAGCTGCTGGTGGTGCAGGCCGGCGACGAGGATCCATCGATG
ATGCACGGCCACGGTGGTTGCAGCGGCAAGCAGAGCAAGAGCCTGGACTC
GGTGGCCGCAATGACGCCCGAGGAGGAGAACAGGAAATGCATGAACGACT
TCCTTAACAAGATAGACAACACCATTTCTGAGTCGCGCAAATATGTGGAG
CGCTCTAAGGACCTGGTCAGCAGTCAGAGTGATGCGGACATCTGCATCAG
TGCCACCGCCGACGTTTTCCCGCAGCGCCGCCATCCGCTGAACAACTCCT
ACAAGACCAACAACAACGACCGTCCGTCGCAGTATCAGCGCCACAGCTCG
ACGGGCAGCGGGAACTCCTCGGATACGGCGCACCTGCTGAACACGACGCA
GACGCGACGAGTCCAGAATTCGCTGAAGCGGCTGGAGAAGCAGCAGGACG
ACTTCTTTGAGTTGTAGAAGCTTTCTAGACCAT
BS07889.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:36:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12207-RG | 1101 | CG12207-PG | 1..1101 | 17..1117 | 5505 | 100 | Plus |
CG12207-RF | 1101 | CG12207-PF | 1..1101 | 17..1117 | 5505 | 100 | Plus |
CG12207-RC | 1101 | CG12207-PC | 1..1101 | 17..1117 | 5505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:36:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12207-RG | 2535 | CG12207-RG | 642..1742 | 17..1117 | 5505 | 100 | Plus |
CG12207-RF | 2113 | CG12207-RF | 220..1320 | 17..1117 | 5505 | 100 | Plus |
CG12207-RC | 1997 | CG12207-RC | 104..1204 | 17..1117 | 5505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:35:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14300419..14301018 | 262..861 | 3000 | 100 | Plus |
3R | 32079331 | 3R | 14301228..14301483 | 862..1117 | 1280 | 100 | Plus |
3R | 32079331 | 3R | 14298786..14298987 | 61..262 | 1010 | 100 | Plus |
3R | 32079331 | 3R | 14290773..14290820 | 17..64 | 240 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 05:36:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6899 | 473..638 | 319 | 68.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6893 | 475..638 | 275 | 66.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6796..6956 | 453..620 | 220 | 61.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2300..2449 | 495..650 | 216 | 63.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1062..1157 | 542..641 | 165 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6824 | 523..638 | 161 | 64.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6414..6563 | 488..638 | 149 | 58.2 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 849..1005 | 472..638 | 146 | 58.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2450..2661 | 439..641 | 138 | 56.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2394 | 543..638 | 130 | 64.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6779 | 598..638 | 120 | 79.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6800 | 598..638 | 120 | 79.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2376 | 601..641 | 111 | 76.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6758 | 606..638 | 111 | 81.8 | Plus |
BS07889.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:05:30 Download gff for
BS07889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RC | 1..1101 | 17..1117 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:43:26 Download gff for
BS07889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RC | 66..1166 | 17..1117 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:27 Download gff for
BS07889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RB | 422..1522 | 17..1117 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:05:31 Download gff for
BS07889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RC | 63..1166 | 14..1117 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:14:34 Download gff for
BS07889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12207-RC | 104..1204 | 17..1117 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:14:34 Download gff for
BS07889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14290773..14290820 | 17..64 | 100 | -> | Plus |
3R | 14298790..14298987 | 65..262 | 100 | -> | Plus |
3R | 14300420..14301018 | 263..861 | 100 | -> | Plus |
3R | 14301228..14301483 | 862..1117 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:27 Download gff for
BS07889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 10116495..10116542 | 17..64 | 100 | -> | Plus |
arm_3R | 10124512..10124709 | 65..262 | 100 | -> | Plus |
arm_3R | 10126142..10126740 | 263..861 | 100 | -> | Plus |
arm_3R | 10126950..10127205 | 862..1117 | 100 | | Plus |
BS07889.pep Sequence
Translation from 16 to 1116
> BS07889.pep
MDYIVKAYKDWKLHSQFQEIVPDMDDSEFMFNEKQSIRDSGRTLKRYGST
CCNSLRNNETLIRHIVEKTDTLQGIALKYGCTTEQIRRANRLFASDSLFL
RQFLLVPVEKNSPYYPQVPGDSIAAFDAVLATPPGTPDANGQREAHNNAN
NLSQSNKSFMKSNDISSSSSSSSSGSSSSCNTSGTGPISGGSRSGGNQQQ
QQQQPPQRPYSIAGELLVVQAGDEDPSMMHGHGGCSGKQSKSLDSVAAMT
PEEENRKCMNDFLNKIDNTISESRKYVERSKDLVSSQSDADICISATADV
FPQRRHPLNNSYKTNNNDRPSQYQRHSSTGSGNSSDTAHLLNTTQTRRVQ
NSLKRLEKQQDDFFEL*
BS07889.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:41:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12207-PG | 366 | CG12207-PG | 1..366 | 1..366 | 1904 | 100 | Plus |
CG12207-PF | 366 | CG12207-PF | 1..366 | 1..366 | 1904 | 100 | Plus |
CG12207-PC | 366 | CG12207-PC | 1..366 | 1..366 | 1904 | 100 | Plus |
CG12207-PB | 366 | CG12207-PB | 1..366 | 1..366 | 1904 | 100 | Plus |
CG12207-PE | 343 | CG12207-PE | 1..343 | 24..366 | 1777 | 100 | Plus |