Clone Sequence Records
BS07925.3prime Sequence
938 bp (843 high quality bases) assembled on 2006-01-06
> BS07925.3prime
ATGGTCTAGAAAGCTTTTATTCGGCAGAGCTTTTGCTTTTATCATCTTGC
TTTTCACAGGACACGGCAAACACCCAGGAGCTGCCCTGTTTGTGGTCGCG
GACCTGAATGCCGTGCTGTTGTAACAAGCTCCTCAGTTCATCACAGGCGG
CTAAAAGCTGCGGGTTCTTAACATTTCCGGAGGTGGCCCTTTCCCGCATT
CTTCCCCGAACGTTTATCACATCATTCACAAGCAAATTGGGATCAATGCT
ATGATCCGTAAAGGAAACCTTTTCTTGCAACGATTCTTTATCCTGCAACT
CTGATAGACCAAACGTGACTATGGCACGGTTTATGAAGTTTCCAGCTGCC
AACAGCAGATCAATGCAGTAGGCGGGCTCCTCCTGTGCGTCCACTTGCTG
CTCATTTATGCAGCGACTTATGCTGCTCATCTGATCGATTAGCACGCTGA
TGGCTCTGGCGGTATCGAAATCATCTCGAAGGCAATTATCGAATTCGGTT
ACTGTATGAGTCAGTTGGGCCTTTAACGCTCCCTCGTCTAACAAGTGCAC
GGGCTTCAGGAATTGGGTATAGGCACTTAGATCGGCCTGAAAGTTTCTAA
ACCGCTGCAGGGTCTGGCGAGCCGTCACCATCAACTGATCGCTATAAGGC
ATTGCATTGCGGTAATTGGACAGCAGGCAGGCCATTCGAAACTCATCGGC
GGTGTACTTCTTCAGCAGCTCCGACACGGAGATCGTGTTGCCCAGAGACT
TTGACATCTTCTCCCGATCTCCAACCATATGAAGTTGTCCGGTGTGCACC
CAATAGTTTACCCACTGGTCAGTTTTATACCGTGCACAGCACTGCGCCTC
CTCGTTTTCGTGGTGCGGAAAACGCAAGTCCAAGCCGCCAGCATGAATGT
CCAACTGGCGGCCAAAGAATAAACTGGCATGGCGCTGC
BS07925.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:58:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-PA | 1677 | CG8257-RA | 770..1677 | 924..17 | 4540 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:42:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-RB | 2108 | CG8257-RB | 856..1781 | 938..14 | 4575 | 99.7 | Minus |
| CG8257-RA | 1813 | CG8257-RA | 856..1781 | 938..14 | 4575 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:42:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14159423..14160333 | 14..924 | 4555 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:42:52 has no hits.
BS07925.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:28:03 Download gff for
BS07925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-PA | 755..1677 | 17..938 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:23:29 Download gff for
BS07925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-PA | 755..1677 | 17..938 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:46:15 Download gff for
BS07925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 856..1787 | 7..938 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:14:39 Download gff for
BS07925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 856..1787 | 7..938 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:14:39 Download gff for
BS07925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14159417..14160348 | 7..938 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:46:15 Download gff for
BS07925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10046922..10047853 | 7..938 | 99 | | Plus |
BS07925.5prime Sequence
905 bp (793 high quality bases) assembled on 2006-01-06
> BS07925.5prime
GAAGTTATCAGTCGACATGTATAGCCTCAAGGAGGGGCTCCGGGCTCTTA
ACAGTCGAACGAGACCAGCTCTCATTTGCCGGCGCAACATTTCGGAGGAG
GCTCCCAAACAGGATAGTCCGTTTAAATGGAGAAAACCAATTGGCCAGCA
CACAGGAATCAATATATACAATCACGGCTTGCGGCAGAAGGTACCCCTAA
TCCTACGCAATCCCCAAATGGTCACATGGTACACTTGCGGACCCACTGTT
TATGACTCCGCGCACCTAGGTCATGCCAGCACCTATGTCAAGGTAGACAT
CCTGCAGCGCATTCTCCGCGATTATTTTAAAATCAACCTGGTGACAGCCA
TGAACATCACGGATGTTGACGACAAGATCATTAAGCGGGCCCAGCTCGCT
GGACTGGACTGGCAGAAGATGGCGCGAGCTTATGAAGCGGAATTTCGTCA
GGACATGTTGCGTCTCAATGTTCAGGCGCCGGATGTGCGCAGTCATGTGA
CTACCACCATGCCTGTCATTATTCAGTTCATTCAGCAGCTGATAGACGGA
AAGCAGGCTTACGTTACCCCGGATAACTCTGTTTACTTTGATGTCTCCAA
AAGCAAGAACTATGGAAAGCTTCAAAACTTAGGCCTAAGCGAGGACAAAT
TGGACCCCATCAAACGAAACACTGCCGATTTTGCCTTGTGGAAGGCGCGT
AAAAGTGGCAGTGAGCCCACGTGGGCTGCACCCTGNGGTGGCGAGGGACG
CCCCGGTTGGCACATTGAATGCAGCGCCATTGCAGGTTTATTCTTTGGCC
GCCAGTTGGACATTCATGCTGGCGGCTTGGACTTGCGTTTTCCGCACCAC
GAAAACGAGGAGGCGCAGTGCTGTGCACGGTATAAACTGACCAGTGGGTA
AACTA
BS07925.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:58:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-PA | 1677 | CG8257-RA | 1..870 | 17..886 | 4331 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:21:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-RB | 2108 | CG8257-RB | 102..991 | 17..905 | 4414 | 99.8 | Plus |
| CG8257-RA | 1813 | CG8257-RA | 102..991 | 17..905 | 4414 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:21:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14160213..14161091 | 905..28 | 4334 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-11 14:21:06 has no hits.
BS07925.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:28:04 Download gff for
BS07925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-PA | 1..889 | 17..904 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:23:30 Download gff for
BS07925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-PA | 1..889 | 17..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:37:00 Download gff for
BS07925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 102..990 | 17..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:57:19 Download gff for
BS07925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 102..990 | 17..904 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:57:19 Download gff for
BS07925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14160214..14161091 | 28..904 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:37:00 Download gff for
BS07925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10047719..10048596 | 28..904 | 99 | | Minus |
BS07925.complete Sequence
1709 bp assembled on 2007-10-26
GenBank Submission: FJ636033
> BS07925.complete
GAAGTTATCAGTCGACATGTATAGCCTCAAGGAGGGGCTCCGGGCTCTTA
ACAGTCGAACGAGACCAGCTCTCATTTGCCGGCGCAACATTTCGGAGGAG
GCTCCCAAACAGGATAGTCCGTTTAAATGGAGAAAACCAATTGGCCAGCA
CACAGGAATCAATATATACAATCACGGCTTGCGGCAGAAGGTACCCCTAA
TCCTACGCAATCCCCAAATGGTCACATGGTACACTTGCGGACCCACTGTT
TATGACTCCGCGCACCTAGGTCATGCCAGCACCTATGTCAAGGTAGACAT
CCTGCAGCGCATTCTCCGCGATTATTTTAAAATCAACCTGGTGACAGCCA
TGAACATCACGGATGTTGACGACAAGATCATTAAGCGGGCCCAGCTCGCT
GGACTGGACTGGCAGAAGATGGCGCGAGCTTATGAAGCGGAATTTCGTCA
GGACATGTTGCGTCTCAATGTTCAGGCGCCGGATGTGCGCAGTCATGTGA
CTACCACCATGCCTGTCATTATTCAGTTCATTCAGCAGCTGATAGACGGA
AAGCAGGCTTACGTTACCCCGGATAACTCTGTTTACTTTGATGTCTCCAA
AAGCAAGAACTATGGAAAGCTTCAAAACTTAGGCCTAAGCGAGGACAAAT
TGGACCCCATCAAACGAAACACTGCCGATTTTGCCTTGTGGAAGGCGCGT
AAAAGTGGCAGTGAGCCCACGTGGGCTGCACCCTGGGGTGGCGAGGGACG
CCCCGGTTGGCACATTGAATGCAGCGCCATTGCAGGTTTATTCTTTGGCC
GCCAGTTGGACATTCATGCTGGCGGCTTGGACTTGCGTTTTCCGCACCAC
GAAAACGAGGAGGCGCAGTGCTGTGCACGGTATAAAACTGACCAGTGGGT
AAACTATTGGGTGCACACCGGACAACTTCATATGGTTGGAGATCGGGAGA
AGATGTCAAAGTCTCTGGGCAACACGATCTCCGTGTCGGAGCTGCTGAAG
AAGTACACCGCCGATGAGTTTCGAATGGCCTGCCTGCTGTCCAATTACCG
CAATGCAATGCCTTATAGCGATCAGTTGATGGTGACGGCTCGCCAGACCC
TGCAGCGGTTTAGAAACTTTCAGGCCGATCTAAGTGCCTATACCCAATTC
CTGAAGCCCGTGCACTTGTTAGACGAGGGAGCGTTAAAGGCCCAACTGAC
TCATACAGTAACCGAATTCGATAATTGCCTTCGAGATGATTTCGATACCG
CCAGAGCCATCAGCGTGCTAATCGATCAGATGAGCAGCATAAGTCGCTGC
ATAAATGAGCAGCAAGTGGACGCACAGGAGGAGCCCGCCTACTGCATTGA
TCTGCTGTTGGCAGCTGGAAACTTCATAAACCGTGCCATAGTCACGTTTG
GTCTATCAGAGTTGCAGGATAAAGAATCGTTGCAAGAAAAGGTTTCCTTT
ACGGATCATAGCATTGATCCCAATTTGCTTGTGAATGATGTGATAAACGT
TCGGGGAAGAATGCGGGAAAGGGCCACCTCCGGAAATGTTAAGAACCCGC
AGCTTTTAGCCGCCTGTGATGAACTGAGGAGCTTGTTACAACAGCACGGC
ATTCAGGTCCGCGACCACAAACAGGGCAGCTCCTGGGTGTTTGCCGTGTC
CTGTGAAAAGCAAGATGATAAAAGCAAAAGCTCTGCCGAATAAAAGCTTT
CTAGACCAT
BS07925.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:24:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-RB | 1677 | CG8257-PB | 1..1677 | 17..1693 | 8385 | 100 | Plus |
| CG8257-RA | 1677 | CG8257-PA | 1..1677 | 17..1693 | 8385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:24:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-RB | 2108 | CG8257-RB | 102..1781 | 17..1696 | 8400 | 100 | Plus |
| CG8257-RA | 1813 | CG8257-RA | 102..1781 | 17..1696 | 8400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:24:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14159423..14161091 | 1696..28 | 8345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:24:18 has no hits.
BS07925.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:08:33 Download gff for
BS07925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 1..1677 | 17..1693 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:38:09 Download gff for
BS07925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 67..1752 | 17..1703 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:56:05 Download gff for
BS07925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 102..1776 | 17..1691 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:40:42 Download gff for
BS07925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 67..1741 | 17..1691 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:17:44 Download gff for
BS07925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 102..1776 | 17..1691 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:17:44 Download gff for
BS07925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14159428..14161091 | 28..1691 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:56:05 Download gff for
BS07925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10046933..10048596 | 28..1691 | 100 | | Minus |
BS07925.pep Sequence
Translation from 16 to 1692
> BS07925.pep
MYSLKEGLRALNSRTRPALICRRNISEEAPKQDSPFKWRKPIGQHTGINI
YNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRIL
RDYFKINLVTAMNITDVDDKIIKRAQLAGLDWQKMARAYEAEFRQDMLRL
NVQAPDVRSHVTTTMPVIIQFIQQLIDGKQAYVTPDNSVYFDVSKSKNYG
KLQNLGLSEDKLDPIKRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHI
ECSAIAGLFFGRQLDIHAGGLDLRFPHHENEEAQCCARYKTDQWVNYWVH
TGQLHMVGDREKMSKSLGNTISVSELLKKYTADEFRMACLLSNYRNAMPY
SDQLMVTARQTLQRFRNFQADLSAYTQFLKPVHLLDEGALKAQLTHTVTE
FDNCLRDDFDTARAISVLIDQMSSISRCINEQQVDAQEEPAYCIDLLLAA
GNFINRAIVTFGLSELQDKESLQEKVSFTDHSIDPNLLVNDVINVRGRMR
ERATSGNVKNPQLLAACDELRSLLQQHGIQVRDHKQGSSWVFAVSCEKQD
DKSKSSAE*
BS07925.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:40:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-PB | 558 | CG8257-PB | 1..558 | 1..558 | 2933 | 100 | Plus |
| CG8257-PA | 558 | CG8257-PA | 1..558 | 1..558 | 2933 | 100 | Plus |
| Aats-cys-PA | 741 | CG8431-PA | 204..654 | 132..558 | 538 | 33.6 | Plus |
| Aats-cys-PA | 741 | CG8431-PA | 20..98 | 48..126 | 237 | 53.2 | Plus |
