Clone Sequence Records
BS07943.3prime Sequence
936 bp (803 high quality bases) assembled on 2006-01-06
> BS07943.3prime
ATGGTCTAGAAAGCTTTTAGTTGGCGAACGAAGTGAGCGAATCACGTCCT
TTAACTTCGCGATCCGGAAAAAACATGTCGGAGTTTGGATCGTTCTCATC
GACCAGCTGTCGCATCATCCAGAGCCGCTCATCCTCGCTCTCCTTCGATT
TGTTATGAGTCTTGGATGCCTGGAAGCCGAGAAAGGATTCCGGTTCCATG
CTGACATATCTGCTGACCGGTGGCGATAGCGACCATCGATTTTCCCCATA
TTTCTGCTCGAGCTCATCCTCGTTCTCCTTCTCATCCACTATTAAGTGGG
TGCCCAAGTGTGCCCGTTGCAGAGGCATGATCGGTACAACCGCCTCAAAG
GACATCAGTTCGCAGAAGATGGCTTGCTCCACGGTTCCGAACGAGGAGAG
CACATGGTCGATGTAGTTGCGCTCCAATCCCCTGTAGACCTGCGGCCACG
TGGGTATCGATAGGATGCTCCACAGCTGCAGGGCCACGCGACTCAATGGA
CCGCTGCGGGTCTTCTGCAGGTGGTCAATGATTTCCAGCATCATGAAGTC
CTGCCTATAATTATCCATTATCTTCCCCTGCTCACACTGCATCGGCGAGA
AGGGAGAATCCACCGATAACTGGGCCGCACCCCATAGATACGGCAAAAAG
TAGTAGTCTTCGATGGTGCACGCCGGATCCTTGGCAATGGTCAGTCCATA
GGTGCTTATCAGGCGCCTAACCACATTCACATAGCGATTGAAGAGCATCA
GTGCAGCGGCCACCGTATCCTTGGCCAACAGGATACCGGCGCGAAATAGG
CCGCAGAGAAAGAAAAGGAAACATCACTCGTTGGCTGGACCAAAATCCAG
GGTGTTCCCATTACAAACGATCGTCGAAGGTATTGGTCCAGTTCGTTGAT
GTGCTTGCAGTTCACATTGATGGCCTCGTCCAGTTT
BS07943.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:58:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8509-PA | 1299 | CG8509-RA | 496..1299 | 820..17 | 4020 | 100 | Minus |
| CG8509-PA | 1299 | CG8509-RA | 379..451 | 936..864 | 315 | 97.2 | Minus |
| CG8509-PA | 1299 | CG8509-RA | 452..490 | 864..826 | 195 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:09:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8509-RA | 1393 | CG8509-RA | 428..1348 | 936..17 | 4505 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:09:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15809982..15810902 | 936..17 | 4450 | 99.1 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:09:36 has no hits.
BS07943.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:28:37 Download gff for
BS07943.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-PA | 379..1299 | 17..936 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:24:14 Download gff for
BS07943.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-PA | 379..1299 | 17..936 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:04:08 Download gff for
BS07943.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 428..1348 | 17..936 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:13:55 Download gff for
BS07943.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 428..1348 | 17..936 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:13:55 Download gff for
BS07943.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15809982..15810902 | 17..936 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:04:08 Download gff for
BS07943.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15704015..15704935 | 17..936 | 99 | | Minus |
BS07943.5prime Sequence
947 bp (794 high quality bases) assembled on 2006-01-06
> BS07943.5prime
GAAGTTATCAGTCGACATGAGCAACAAACTGGGCTATGATGTGACCGATC
CCACTGTCCAATTGCTCCGGGCATCGGCGTTCATGCAAAATGGGCCAGTG
AAGCAGGTTCGCAGCCTGGAGGATCTGGACCGCTGGGTTCGCTCGCAGGC
ATATTACGATATCATTGCGTACATCAGCAACACCAGCAAGGCCATCCAGG
GTCATCGTTTGACGCAGACCTTTCCGGTCACGGAGCAGATGCGTCGATTG
AGCGAGATATTCGATGGACTGGATCACCTGATTGTCGAGCATACACCGAA
AATTGAGGACTCGTATCTGGCGTTACCGTTCGGCCAGGTTAGAAGCAAGG
CCTATCGCACTTGGATGCGAGAGATGTACCAGCATGTGTTTAGCAAACTG
GACGAGGCCATCAATGTGAACTGCAAGCACATCAACGAACTGGGACAATA
CCTTCGACGATCGTTTGGTAATGGGAACACCCTGGATTTTGGTCCAGCCA
ACGAGTTGATGTTCCTTTTCTTTCTCTGCGGCCTATTTCGCGCCGGTATC
CTGTTGGCCAAGGATACGGTGGCCGCTGCACTGATGCTCTTCAATCGCTA
TGTGAATGTGGTTAGGCGCCTGATAAGCACCTATGGACTGACCATTGCCA
AGGATCCGGCGTGCACCATCGAAGACTACTACTTTTTGCCGTATCTATGG
GGTGCGGCCCAGTTATCGGTGGATTCTCCCTTCTCGCCGATGCAGTGTGA
GCAGGGGAAGATAATGGATAATTATAGGCAGGACTTCATGATGCTGGAAA
TCATTGACCACCTGCAGAAGACCCGCAGCGGTCCATTGAGTCGCGTGGCC
CTGCAGCTGTGGAGCATCCTATCGATACCCACGTGGCCGCANGTCTACAG
GGGATTGGAGCGCAACTACATCGACCATGTGCTCTCCTCGTTCGGAA
BS07943.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:58:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8509-PA | 1299 | CG8509-RA | 1..931 | 17..947 | 4636 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:30:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8509-RA | 1393 | CG8509-RA | 50..980 | 17..947 | 4644 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:30:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15809604..15810534 | 17..947 | 4644 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:30:50 has no hits.
BS07943.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:28:37 Download gff for
BS07943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-PA | 1..929 | 17..945 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:24:16 Download gff for
BS07943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-PA | 1..929 | 17..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:05:37 Download gff for
BS07943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 46..980 | 9..947 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:10:16 Download gff for
BS07943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 46..980 | 9..947 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:10:16 Download gff for
BS07943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15809600..15810534 | 9..947 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:05:37 Download gff for
BS07943.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15703633..15704567 | 9..947 | 99 | | Plus |
BS07943.complete Sequence
1331 bp (1331 high quality bases) assembled on 2006-01-10
> BS07943.complete
GAAGTTATCAGTCGACATGAGCAACAAACTGGGCTATGATGTGACCGATC
CCACTGTCCAATTGCTCCGGGCATCGGCGTTCATGCAAAATGGGCCAGTG
AAGCAGGTTCGCAGCCTGGAGGATCTGGACCGCTGGGTTCGCTCGCAGGC
ATATTACGATATCATTGCGTACATCAGCAACACCAGCAAGGCCATCCAGG
GTCATCGTTTGACGCAGACCTTTCCGGTCACGGAGCAGATGCGTCGATTG
AGCGAGATATTCGATGGACTGGATCACCTGATTGTCGAGCATACACCGAA
AATTGAGGACTCGTATCTGGCGTTACCGTTCGGCCAGGTTAGAAGCAAGG
CCTATCGCACTTGGATGCGAGAGATGTACCAGCATGTGTTTAGCAAACTG
GACGAGGCCATCAATGTGAACTGCAAGCACATCAACGAACTGGGACAATA
CCTTCGACGATCGTTTGGTAATGGGAACACCCTGGATTTTGGTCCAGCCA
ACGAGTTGATGTTCCTTTTCTTTCTCTGCGGCCTATTTCGCGCCGGTATC
CTGTTGGCCAAGGATACGGTGGCCGCTGCACTGATGCTCTTCAATCGCTA
TGTGAATGTGGTTAGGCGCCTGATAAGCACCTATGGACTGACCATTGCCA
AGGATCCGGCGTGCACCATCGAAGACTACTACTTTTTGCCGTATCTATGG
GGTGCGGCCCAGTTATCGGTGGATTCTCCCTTCTCGCCGATGCAGTGTGA
GCAGGGGAAGATAATGGATAATTATAGGCAGGACTTCATGATGCTGGAAA
TCATTGACCACCTGCAGAAGACCCGCAGCGGTCCATTGAGTCGCGTGGCC
CTGCAGCTGTGGAGCATCCTATCGATACCCACGTGGCCGCAGGTCTACAG
GGGATTGGAGCGCAACTACATCGACCATGTGCTCTCCTCGTTCGGAACCG
TGGAGCAAGCCATCTTCTGCGAACTGATGTCCTTTGAGGCGGTTGTACCG
ATCATGCCTCTGCAACGGGCACACTTGGGCACCCACTTAATAGTGGATGA
GAAGGAGAACGAGGATGAGCTCGAGCAGAAATATGGGGAAAATCGATGGT
CGCTATCGCCACCGGTCAGCAGATATGTCAGCATGGAACCGGAATCCTTT
CTCGGCTTCCAGGCATCCAAGACTCATAACAAATCGAAGGAGAGCGAGGA
TGAGCGGCTCTGGATGATGCGACAGCTGGTCGATGAGAACGATCCAAACT
CCGACATGTTTTTTCCGGATCGCGAAGTTAAAGGACGTGATTCGCTCACT
TCGTTCGCCAACTAAAAGCTTTCTAGACCAT
BS07943.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:00:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8509-RA | 1299 | CG8509-PA | 1..1299 | 17..1315 | 6495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:00:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8509-RA | 1393 | CG8509-RA | 50..1348 | 17..1315 | 6495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:00:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15809604..15810902 | 17..1315 | 6495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:00:34 has no hits.
BS07943.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:05:13 Download gff for
BS07943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 1..1299 | 17..1315 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:43:34 Download gff for
BS07943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 46..1348 | 9..1315 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:34 Download gff for
BS07943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 50..1346 | 17..1313 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:05:14 Download gff for
BS07943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 46..1348 | 9..1315 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:08:09 Download gff for
BS07943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 50..1346 | 17..1313 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:08:09 Download gff for
BS07943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15809604..15810900 | 17..1313 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:34 Download gff for
BS07943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15703637..15704933 | 17..1313 | 100 | | Plus |
BS07943.pep Sequence
Translation from 16 to 1314
> BS07943.pep
MSNKLGYDVTDPTVQLLRASAFMQNGPVKQVRSLEDLDRWVRSQAYYDII
AYISNTSKAIQGHRLTQTFPVTEQMRRLSEIFDGLDHLIVEHTPKIEDSY
LALPFGQVRSKAYRTWMREMYQHVFSKLDEAINVNCKHINELGQYLRRSF
GNGNTLDFGPANELMFLFFLCGLFRAGILLAKDTVAAALMLFNRYVNVVR
RLISTYGLTIAKDPACTIEDYYFLPYLWGAAQLSVDSPFSPMQCEQGKIM
DNYRQDFMMLEIIDHLQKTRSGPLSRVALQLWSILSIPTWPQVYRGLERN
YIDHVLSSFGTVEQAIFCELMSFEAVVPIMPLQRAHLGTHLIVDEKENED
ELEQKYGENRWSLSPPVSRYVSMEPESFLGFQASKTHNKSKESEDERLWM
MRQLVDENDPNSDMFFPDREVKGRDSLTSFAN*
BS07943.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:08:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8509-PA | 432 | CG8509-PA | 1..432 | 1..432 | 2266 | 100 | Plus |
| Ptpa-PA | 398 | CG3289-PA | 17..321 | 29..338 | 577 | 39.7 | Plus |
| CG2104-PB | 424 | CG2104-PB | 11..367 | 18..369 | 555 | 34.2 | Plus |
| CG2104-PA | 424 | CG2104-PA | 11..367 | 18..369 | 555 | 34.2 | Plus |
