Clone Sequence Records
BS07964.3prime Sequence
393 bp (392 high quality bases) assembled on 2006-01-06
> BS07964.3prime
ATGGTCTAGAAAGCTTCTAATGTTTCATGTCCCCGATGTTCTGGGGCGAT
GGCTTGGGCATGTGACTTACGACTAGAGAACTATAATATAGGAGACGTTG
GCATAATAATATGTCTAAGAGATTGACAATCGGCTTGGGGTCTCCGGCTG
AGGTCCTGGATGCCGTGCCTTTGGCCCTTCGTACGGCCGTGATAGTGCGC
ACAAGCCGCGATTTGATTGGTGATTGGTCGTCCTGTCGCCGGTCGTCCTG
CAGCCAATGCGCTGCCTCCAAAAAGGACTCGTCGTTGGCCTCCTGGCCGG
GAGGAGGGTGGTGTCCTCGGGTCGGGGGTTGAGTCGTTGGCAGCCCGGCA
ATGCAGTTGGCAACACTCTGTTTGGCCATGTCGACTGATAACT
BS07964.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:59:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31781-PB | 363 | CG31781-RB | 1..363 | 379..17 | 1815 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 00:39:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:39:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16877840..16878202 | 379..17 | 1815 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:39:26 has no hits.
BS07964.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:29:22 Download gff for
BS07964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-PB | 1..363 | 17..379 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:25:15 Download gff for
BS07964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-PB | 1..363 | 17..379 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:03:21 Download gff for
BS07964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877837..16878201 | 18..383 | 99 | -> | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:03:21 Download gff for
BS07964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877837..16878201 | 18..383 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:45:50 Download gff for
BS07964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877837..16878201 | 18..383 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:45:50 Download gff for
BS07964.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877837..16878201 | 18..383 | 99 | -> | Minus |
BS07964.5prime Sequence
393 bp (392 high quality bases) assembled on 2006-01-06
> BS07964.5prime
GAAGTTATCAGTCGACATGGCCAAACAGAGTGTTGCCAACTGCATTGCCG
GGCTGCCAACGACTCAACCCCCGACCCGAGGACACCACCCTCCTCCCGGC
CAGGAGGCCAACGACGAGTCCTTTTTGGAGGCAGCGCATTGGCTGCAGGA
CGACCGGCGACAGGACGACCAATCACCAATCAAATCGCGGCTTGTGCGCA
CTATCACGGCCGTACGAAGGGCCAAAGGCACGGCATCCAGGACCTCAGCC
GGAGACCCCAAGCCGATTGTCAATCTCTTAGACATATTATTATGCCAACG
TCTCCTATATTATAGTTCTCTAGTCGTAAGTCACATGCCCAAGCCATCGC
CCCAGAACATCGGGGACATGAAACATTAGAAGCTTTCTAGACC
BS07964.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:59:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31781-PB | 363 | CG31781-RB | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 13:48:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:48:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16877840..16878202 | 17..379 | 1815 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 13:48:31 has no hits.
BS07964.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:29:23 Download gff for
BS07964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-PB | 1..363 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:25:17 Download gff for
BS07964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-PB | 1..363 | 17..379 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:11:29 Download gff for
BS07964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877837..16878201 | 13..378 | 99 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:11:29 Download gff for
BS07964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877837..16878201 | 13..378 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 12:37:04 Download gff for
BS07964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877837..16878201 | 13..378 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 12:37:04 Download gff for
BS07964.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877837..16878201 | 13..378 | 99 | -> | Plus |
BS07964.complete Sequence
395 bp (395 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ636046
> BS07964.complete
GAAGTTATCAGTCGACATGGCCAAACAGAGTGTTGCCAACTGCATTGCCG
GGCTGCCAACGACTCAACCCCCGACCCGAGGACACCACCCTCCTCCCGGC
CAGGAGGCCAACGACGAGTCCTTTTTGGAGGCAGCGCATTGGCTGCAGGA
CGACCGGCGACAGGACGACCAATCACCAATCAAATCGCGGCTTGTGCGCA
CTATCACGGCCGTACGAAGGGCCAAAGGCACGGCATCCAGGACCTCAGCC
GGAGACCCCAAGCCGATTGTCAATCTCTTAGACATATTATTATGCCAACG
TCTCCTATATTATAGTTCTCTAGTCGTAAGTCACATGCCCAAGCCATCGC
CCCAGAACATCGGGGACATGAAACATTAGAAGCTTTCTAGACCAT
BS07964.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 14:57:06 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 14:57:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:57:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16877840..16878202 | 17..379 | 1815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:57:05 has no hits.
BS07964.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:48:44 Download gff for
BS07964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-RB | 1..363 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:36:53 Download gff for
BS07964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-RB | 1852..2220 | 13..386 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:48:45 Download gff for
BS07964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31781-RB | 1852..2220 | 13..386 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:56:34 Download gff for
BS07964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877840..16878202 | 17..379 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:56:34 Download gff for
BS07964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16877840..16878202 | 17..379 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:35:10 Download gff for
BS07964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877840..16878202 | 17..379 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:35:10 Download gff for
BS07964.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16877840..16878202 | 17..379 | 100 | | Plus |
BS07964.pep Sequence
Translation from 16 to 378
> BS07964.pep
MAKQSVANCIAGLPTTQPPTRGHHPPPGQEANDESFLEAAHWLQDDRRQD
DQSPIKSRLVRTITAVRRAKGTASRTSAGDPKPIVNLLDILLCQRLLYYS
SLVVSHMPKPSPQNIGDMKH*
Sequence BS07964.pep has no blast hits.