Clone Sequence Records
BS07968.3prime Sequence
876 bp (810 high quality bases) assembled on 2006-01-06
> BS07968.3prime
ATGGTCTAGAAAGCTTTCATGTCTCCAACGAGGTGACCACCAGATTGTGG
AACACGCTGGCCGACTCGCTCATCATCGCCGCCTGTCCGCAAGAATCGCT
GCTGGCGCCGCTCGGCGGTGTCGCCGTTCCCAGCCTCAAGGCGTCCATGA
TCACCTCGAAATCCTTTTGGTTTTGGTTCATGTCGAAATCGACCAGCTCC
AGATGATGGTGCAAATGGTGATGGTGATTGAGATGGTGATGGTCATTCAG
CTTCATCCGTTTGCCTCCGGGCATTTCGACGCCAGCGCCTGCAGCTCCTC
CGATGCCACCGATTCCACTAATTCCTCCCACATTCACATTCACATTCATT
CCCATACCCAAGCCAACCACATCCAGGGGACACTCCTCAATGGCGGAGAT
GAGGCGCTGTGGCGGTATGTAGAACTGGGACAGAGCCTCGCGCACCAGGC
GATCACTTTCGTCCTCGCTGCCGCTATTGCTCCTCAATCTCTTCCTGCTG
GCGGACAAGGCGGCCTTCTCCAGCTGTTCGGCTCCTTGGGTAATCTCTGG
ATCGATTAGCAGCATGGGTGCATTGATGGCGCTCAGCTCCCTGTCCAGTA
TTTCCAGATCGTTGACCAAGTTGCAGCTGGACAGGTGGCGTTTTCGGTTA
TTCACGCGTTCCGATGCCGAGCCCGAAACGGAAAGGGGCGCCGAATTGGC
CGCCTCGGGAGCGGAGGCACCAGCGGGCGTCCCCAACTGCTGACGCTCGG
GCGGTTGATTCTCCAGGGAGCAAATTCCGCCGCGACCCGACGATGATCCG
TTTGAGGAGCCAAAGGCATCGCCAAAAGAGGATGAAGGCTTGCCGTTGGC
GTTGATATTATTGCTAGTGCTATTGC
BS07968.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:59:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-PA | 1305 | CG2865-RA | 446..1305 | 876..17 | 4300 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:34:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-RB | 5515 | CG2865-RB | 1109..1971 | 876..14 | 4315 | 100 | Minus |
CG2865-RA | 2079 | CG2865-RA | 1168..2030 | 876..14 | 4315 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:34:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2281575..2282437 | 14..876 | 4315 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 18:34:13 has no hits.
BS07968.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:29:28 Download gff for
BS07968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-PA | 446..1305 | 17..876 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:25:24 Download gff for
BS07968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-PA | 446..1305 | 17..876 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 03:56:40 Download gff for
BS07968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 1168..2036 | 6..876 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:27:02 Download gff for
BS07968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 1168..2036 | 6..876 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:27:02 Download gff for
BS07968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2281569..2282437 | 6..876 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 03:56:40 Download gff for
BS07968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2175602..2176470 | 6..876 | 99 | | Plus |
BS07968.5prime Sequence
795 bp (790 high quality bases) assembled on 2006-01-06
> BS07968.5prime
GAAGTTATCAGTCGACATGACCTTGCCCACAAACACACACGCATCTGCAA
ACGACGGCGGCAGCGGCAACAACAACCACAGCAATATCAGCAGTAACAAC
AGCAGCAGCAGCGACGAAGACTCAGACATGTTTGGACCACCCCGCTGCTC
CCCGCCCATCGGCTATCACCATCACCGTTCCCGTGTGCCCATGATCTCGC
CAAAGCTGCGGCAGCGCGAGGAGCGCAAGCGGATCCTCCAGCTCTGCGCC
CACAAGATGGAGAGGATCAAGGACTCGGAGGCGAACCTGCGGCGCAGCGT
CTGCATCAACAACACCTACTGCCGCCTGAATGACGAACTGCGGCGCGAGA
AGCAGATGCGCTACCTCCAGAATCTGCCCAGAACCAGCGACAGCGGCGCA
AGCACCGAACTGGCGCGTGAGAATCTCTTCCAGCCGAACATGGACGACGC
CAAGCCGGCCGGCAATAGCACTAGCAATAATATCAACGCCAACGGCAAGC
CTTCATCCTCTTTTGGCGATGCCTTTGGCTCCTCAAACGGATCATCGTCG
GGTCGCGGCGGAATTTGCTCCCTGGAGAATCAACCGCCCGAGCGTCAGCA
GTTGGGGACGCCCGCTGGTGCCTCCGCTCCCGAGGCGGCCAATTCGGCGC
CCCTTTCCGTTTCGGGCTCGGCATCGGAACGCGTGAATAACCGAAAACGC
CACCTGTCCAGCTGCAACTTGGTCAACGATCTGGAAATACTGGACAGGGA
GCTGAGCGCCATCAATGCACCCATGCTGCTAATCGATCCAGAGAT
BS07968.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:59:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-PA | 1305 | CG2865-RA | 1..779 | 17..795 | 3895 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:30:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-RB | 5515 | CG2865-RB | 664..1442 | 17..795 | 3895 | 100 | Plus |
CG2865-RA | 2079 | CG2865-RA | 723..1501 | 17..795 | 3895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:30:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2282104..2282520 | 795..379 | 2085 | 100 | Minus |
X | 23542271 | X | 2292325..2292689 | 381..17 | 1825 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 18:30:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6770..6860 | 27..115 | 207 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2430 | 27..121 | 202 | 69.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6809 | 28..112 | 199 | 74.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2382 | 37..115 | 193 | 72.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2424..2527 | 27..128 | 191 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6788 | 50..112 | 189 | 77.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6887 | 41..115 | 182 | 72.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2358 | 59..112 | 180 | 81.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1077..1139 | 50..112 | 180 | 76.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2397..2475 | 42..121 | 172 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6821 | 27..112 | 164 | 68.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1096..1168 | 60..131 | 164 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1482..1571 | 32..117 | 162 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1501..1587 | 20..109 | 162 | 68.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2728..2832 | 8..109 | 158 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2788..2856 | 50..115 | 158 | 72.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1040..1126 | 30..117 | 158 | 65.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2439 | 58..115 | 155 | 74.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2602..2666 | 50..117 | 153 | 72.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6767 | 67..112 | 149 | 80.4 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 972..1040 | 67..136 | 149 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2789..2856 | 41..109 | 144 | 69.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2733..2823 | 28..115 | 141 | 64.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6839..6920 | 30..115 | 141 | 66.3 | Plus |
TART-A | 13424 | TART-A 13424bp | 12089..12181 | 86..182 | 141 | 64.9 | Plus |
TART-A | 13424 | TART-A 13424bp | 911..1003 | 86..182 | 141 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2581..2648 | 52..117 | 137 | 71 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2346 | 81..121 | 124 | 78 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2897..2938 | 66..107 | 120 | 76.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1061..1093 | 79..111 | 120 | 84.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6746 | 84..112 | 118 | 89.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9152..9229 | 42..114 | 116 | 66.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 122..199 | 42..114 | 116 | 66.7 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 530..615 | 66..151 | 114 | 62.1 | Plus |
BS | 5142 | BS BS 5142bp | 2018..2114 | 30..121 | 114 | 61.2 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 122..176 | 61..109 | 108 | 72.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9152..9206 | 61..109 | 108 | 72.7 | Plus |
BS07968.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:29:30 Download gff for
BS07968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-PA | 1..779 | 17..795 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:25:25 Download gff for
BS07968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-PA | 1..779 | 17..795 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:29:26 Download gff for
BS07968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 723..1501 | 17..795 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:57:52 Download gff for
BS07968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 723..1501 | 17..795 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:57:52 Download gff for
BS07968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2292325..2292689 | 17..381 | 100 | | Minus |
X | 2282104..2282517 | 382..795 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:29:26 Download gff for
BS07968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2176137..2176550 | 382..795 | 100 | <- | Minus |
arm_X | 2186358..2186722 | 17..381 | 100 | | Minus |
BS07968.complete Sequence
1337 bp (1337 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ636048
> BS07968.complete
GAAGTTATCAGTCGACATGACCTTGCCCACAAACACACACGCATCTGCAA
ACGACGGCGGCAGCGGCAACAACAACCACAGCAATATCAGCAGTAACAAC
AGCAGCAGCAGCGACGAAGACTCAGACATGTTTGGACCACCCCGCTGCTC
CCCGCCCATCGGCTATCACCATCACCGTTCCCGTGTGCCCATGATCTCGC
CAAAGCTGCGGCAGCGCGAGGAGCGCAAGCGGATCCTCCAGCTCTGCGCC
CACAAGATGGAGAGGATCAAGGACTCGGAGGCGAACCTGCGGCGCAGCGT
CTGCATCAACAACACCTACTGCCGCCTGAATGACGAACTGCGGCGCGAGA
AGCAGATGCGCTACCTCCAGAATCTGCCCAGAACCAGCGACAGCGGCGCA
AGCACCGAACTGGCGCGTGAGAATCTCTTCCAGCCGAACATGGACGACGC
CAAGCCGGCCGGCAATAGCACTAGCAATAATATCAACGCCAACGGCAAGC
CTTCATCCTCTTTTGGCGATGCCTTTGGCTCCTCAAACGGATCATCGTCG
GGTCGCGGCGGAATTTGCTCCCTGGAGAATCAACCGCCCGAGCGTCAGCA
GTTGGGGACGCCCGCTGGTGCCTCCGCTCCCGAGGCGGCCAATTCGGCGC
CCCTTTCCGTTTCGGGCTCGGCATCGGAACGCGTGAATAACCGAAAACGC
CACCTGTCCAGCTGCAACTTGGTCAACGATCTGGAAATACTGGACAGGGA
GCTGAGCGCCATCAATGCACCCATGCTGCTAATCGATCCAGAGATTACCC
AAGGAGCCGAACAGCTGGAGAAGGCCGCCTTGTCCGCCAGCAGGAAGAGA
TTGAGGAGCAATAGCGGCAGCGAGGACGAAAGTGATCGCCTGGTGCGCGA
GGCTCTGTCCCAGTTCTACATACCGCCACAGCGCCTCATCTCCGCCATTG
AGGAGTGTCCCCTGGATGTGGTTGGCTTGGGTATGGGAATGAATGTGAAT
GTGAATGTGGGAGGAATTAGTGGAATCGGTGGCATCGGAGGAGCTGCAGG
CGCTGGCGTCGAAATGCCCGGAGGCAAACGGATGAAGCTGAATGACCATC
ACCATCTCAATCACCATCACCATTTGCACCATCATCTGGAGCTGGTCGAT
TTCGACATGAACCAAAACCAAAAGGATTTCGAGGTGATCATGGACGCCTT
GAGGCTGGGAACGGCGACACCGCCGAGCGGCGCCAGCAGCGATTCTTGCG
GACAGGCGGCGATGATGAGCGAGTCGGCCAGCGTGTTCCACAATCTGGTG
GTCACCTCGTTGGAGACATGAAAGCTTTCTAGACCAT
BS07968.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:26:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-RB | 1305 | CG2865-PB | 1..1305 | 17..1321 | 6525 | 100 | Plus |
CG2865-RA | 1305 | CG2865-PA | 1..1305 | 17..1321 | 6525 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:26:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-RB | 5515 | CG2865-RB | 664..1971 | 17..1324 | 6540 | 100 | Plus |
CG2865-RA | 2079 | CG2865-RA | 723..2030 | 17..1324 | 6540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:26:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2281575..2282520 | 1324..379 | 4730 | 100 | Minus |
X | 23542271 | X | 2292325..2292689 | 381..17 | 1825 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 01:26:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6770..6860 | 27..115 | 207 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2430 | 27..121 | 202 | 69.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6809 | 28..112 | 199 | 74.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2302..2382 | 37..115 | 193 | 72.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2424..2527 | 27..128 | 191 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6788 | 50..112 | 189 | 77.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6887 | 41..115 | 182 | 72.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2358 | 59..112 | 180 | 81.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1077..1139 | 50..112 | 180 | 76.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2397..2475 | 42..121 | 172 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6821 | 27..112 | 164 | 68.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1096..1168 | 60..131 | 164 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1482..1571 | 32..117 | 162 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1501..1587 | 20..109 | 162 | 68.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2728..2832 | 8..109 | 158 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2788..2856 | 50..115 | 158 | 72.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1040..1126 | 30..117 | 158 | 65.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2439 | 58..115 | 155 | 74.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2602..2666 | 50..117 | 153 | 72.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6767 | 67..112 | 149 | 80.4 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 972..1040 | 67..136 | 149 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2789..2856 | 41..109 | 144 | 69.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2733..2823 | 28..115 | 141 | 64.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6839..6920 | 30..115 | 141 | 66.3 | Plus |
TART-A | 13424 | TART-A 13424bp | 911..1003 | 86..182 | 141 | 64.9 | Plus |
TART-A | 13424 | TART-A 13424bp | 12089..12181 | 86..182 | 141 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2581..2648 | 52..117 | 137 | 71 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2346 | 81..121 | 124 | 78 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2897..2938 | 66..107 | 120 | 76.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1061..1093 | 79..111 | 120 | 84.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6746 | 84..112 | 118 | 89.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 122..199 | 42..114 | 116 | 66.7 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9152..9229 | 42..114 | 116 | 66.7 | Plus |
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 530..615 | 66..151 | 114 | 62.1 | Plus |
BS07968.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:04:57 Download gff for
BS07968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 1..1305 | 17..1321 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:43:22 Download gff for
BS07968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 58..1361 | 17..1320 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:59 Download gff for
BS07968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 723..2026 | 17..1320 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:04:57 Download gff for
BS07968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 58..1371 | 17..1332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:25:32 Download gff for
BS07968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2865-RA | 723..2026 | 17..1320 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:25:32 Download gff for
BS07968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2281579..2282517 | 382..1320 | 100 | <- | Minus |
X | 2292325..2292689 | 17..381 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:59 Download gff for
BS07968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2175612..2176550 | 382..1320 | 100 | <- | Minus |
arm_X | 2186358..2186722 | 17..381 | 100 | | Minus |
BS07968.pep Sequence
Translation from 16 to 1320
> BS07968.pep
MTLPTNTHASANDGGSGNNNHSNISSNNSSSSDEDSDMFGPPRCSPPIGY
HHHRSRVPMISPKLRQREERKRILQLCAHKMERIKDSEANLRRSVCINNT
YCRLNDELRREKQMRYLQNLPRTSDSGASTELARENLFQPNMDDAKPAGN
STSNNINANGKPSSSFGDAFGSSNGSSSGRGGICSLENQPPERQQLGTPA
GASAPEAANSAPLSVSGSASERVNNRKRHLSSCNLVNDLEILDRELSAIN
APMLLIDPEITQGAEQLEKAALSASRKRLRSNSGSEDESDRLVREALSQF
YIPPQRLISAIEECPLDVVGLGMGMNVNVNVGGISGIGGIGGAAGAGVEM
PGGKRMKLNDHHHLNHHHHLHHHLELVDFDMNQNQKDFEVIMDALRLGTA
TPPSGASSDSCGQAAMMSESASVFHNLVVTSLET*
BS07968.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:33:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2865-PB | 434 | CG2865-PB | 1..434 | 1..434 | 2252 | 100 | Plus |
CG2865-PA | 434 | CG2865-PA | 1..434 | 1..434 | 2252 | 100 | Plus |