Clone BS07973 Report

Search the DGRC for BS07973

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:79
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptCG7206-RA
Protein status:BS07973.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07973.3prime Sequence

870 bp (837 high quality bases) assembled on 2006-01-06

> BS07973.3prime
ATGGTCTAGAAAGCTTTTAATCGCCGAAGCCAGCGAACTCATCCACATAG
GTGGACATCAGATCAGAGCGACAGGAGACCTGAATGTTGGAGGCATTGGC
CTTGAGCCGAAGGTTCGCGTCGTTGGTGAGCAGGATCATGTGGGGAACCT
GCGCCTGCAGCTGCAGGCAGCAATTCAAAATGCTGTCATCCGGGCAGTCG
ATCTTGATCAGGTGATCCGCCTCCTCCAAAGCGGATTGAGCTTGTATTTG
AAAGCTTTCGTCGAACTTGGTGTTCAAAAAGCGTATTGCTCGCATGGCAA
TCACACGCTGCAGGCAGTCCGACTGGTACTTGCTCTTTAGCTTGTCCAGC
TCTTTGATTACTATGTACGGAAGGTACAGCATGCTGCCCACCGTGCCCGG
CAGCACCACATCGGTCAGTCTCTCCACGAACTTGTGGTTGTGTATGAGGA
CGTTGGTGTCCAGCACAAAGTACATGTAATCCTCAAGCCTTGGGGGCAGC
TCCTCGGCATCGGCCGCCTGCAGCATCAATATAGTGTCGTCCTCTTCCTT
AGCCTCATCCTGACCTTTCTGTGGCGCCTCCTCTTCAATGGACTCCGCCG
GCAGCATCAATAGAGTGTCGTCCCCTTTCTTAGCCTCATCCTGATCATTC
TGTGCCGCCTCCTCTTCAATAGACTCCTGCCATTCCATGGGCTCGACCTC
CATATCGCTGGCCGTCGAGCCATCAAATGCACTTGGATTTGTGATGTTGC
AGGCTTCTGGTTGTTTTTCTATCACCTCTTCGTTGATCTTGGCCACAATA
TTGTTGTTGCGCTCCTCATATAGCTGCTTCTGCTGCAGCGAAGCTCTTAA
CAGCATGTCGACTGATAACT

BS07973.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG7206-PB 1215 CG7206-RB 375..1215 857..17 4205 100 Minus
CG7206-PA 840 CG7206-RA 1..840 856..17 4200 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:26:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG7206-RC 1643 CG7206-RC 520..1360 857..17 4205 100 Minus
CG7206-RB 1585 CG7206-RB 462..1302 857..17 4205 100 Minus
CG7206-RC 1643 CG7206-RC 700..782 596..514 295 90.4 Minus
CG7206-RC 1643 CG7206-RC 781..863 677..595 295 90.4 Minus
CG7206-RB 1585 CG7206-RB 723..805 677..595 295 90.4 Minus
CG7206-RB 1585 CG7206-RB 642..724 596..514 295 90.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:26:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18089295..18089911 241..857 3085 100 Plus
X 23542271 X 18089008..18089233 17..242 1130 100 Plus
X 23542271 X 18089568..18089650 595..677 295 90.4 Plus
X 23542271 X 18089649..18089731 514..596 295 90.4 Plus
Blast to na_te.dros performed on 2015-02-10 21:26:46 has no hits.

BS07973.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:29:38 Download gff for BS07973.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7206-PB 371..1215 17..862 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:25:35 Download gff for BS07973.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7206-PB 371..1215 17..862 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 08:12:15 Download gff for BS07973.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 458..1304 12..862 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:46:40 Download gff for BS07973.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 458..1304 12..862 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:46:40 Download gff for BS07973.3prime
Subject Subject Range Query Range Percent Splice Strand
X 18089006..18089231 12..240 98 <- Plus
X 18089295..18089915 241..862 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 08:12:15 Download gff for BS07973.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17983039..17983264 12..240 98 <- Plus
arm_X 17983328..17983948 241..862 99   Plus

BS07973.5prime Sequence

869 bp (845 high quality bases) assembled on 2006-01-06

> BS07973.5prime
GAAGTTATCAGTCGACATGCTGTTAAGAGCTTCGCTGCAGCAGAAGCAGC
TATATGAGGAGCGCAACAACAATATTGTGGCCAAGATCAACGAAGAGGTG
ATAGAAAAACAACCAGAAGCCTGCAACATCACAAATCCAAGTGCATTTGA
TGGCTCGACGGCCAGCGATATGGAGGTCGAGCCCATGGAATGGCAGGAGT
CTATTGAAGAGGAGGCGGCACAGAATGATCAGGATGAGGCTAAGAAAGGG
GACGACACTCTATTGATGCTGCCGGCGGAGTCCATTGAAGAGGAGGCGCC
ACAGAAAGGTCAGGATGAGGCTAAGGAAGAGGACGACACTATATTGATGC
TGCAGGCGGCCGATGCCGAGGAGCTGCCCCCAAGGCTTGAGGATTACATG
TACTTTGTGCTGGACACCAACGTCCTCATACACAACCACAAGTTCGTGGA
GAGACTGACCGATGTGGTGCTGCCGGGCACGGTGGGCAGCATGCTGTACC
TTCCGTACATAGTAATCAAAGAGCTGGACAAGCTAAAGAGCAAGTACCAG
TCGGACTGCCTGCAGCGTGTGATTGCCATGCGAGCAATACGCTTTTTGAA
CACCAAGTTCGACGAAAGCTTTCAAATACAAGCTCAATCCGCTTTGGAGG
AGGCGGATCACCTGATCAAGATCGACTGCCCGGATGACAGCATTTTGAAT
TGCTGCCTGCAGCTGCAGGCGCAGGTTCCCCACATGATCCTGCTCACCAA
CGACGCGAACCTTCGGCTCAAGGCCAATGCCTCCAACATTCAGGTCTCCT
GTCGCTCTGATCTGATGTCCACCTATGTGGATGAGTTCGCTGGCTTCGGC
GATTAAAGCTTTCTAGACC

BS07973.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG7206-PB 1215 CG7206-RB 375..1215 16..856 4205 100 Plus
CG7206-PA 840 CG7206-RA 1..840 17..856 4200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:24:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG7206-RC 1643 CG7206-RC 520..1360 16..856 4205 100 Plus
CG7206-RB 1585 CG7206-RB 462..1302 16..856 4205 100 Plus
CG7206-RC 1643 CG7206-RC 700..782 277..359 295 90.4 Plus
CG7206-RC 1643 CG7206-RC 781..863 196..278 295 90.4 Plus
CG7206-RB 1585 CG7206-RB 642..724 277..359 295 90.4 Plus
CG7206-RB 1585 CG7206-RB 723..805 196..278 295 90.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18089295..18089911 632..16 3085 100 Minus
X 23542271 X 18089008..18089233 856..631 1130 100 Minus
X 23542271 X 18089568..18089650 278..196 295 90.4 Minus
X 23542271 X 18089649..18089731 359..277 295 90.4 Minus
Blast to na_te.dros performed on 2015-02-11 14:24:38 has no hits.

BS07973.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:29:39 Download gff for BS07973.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7206-PB 371..1215 11..856 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:25:37 Download gff for BS07973.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7206-PB 371..1215 11..856 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:37:56 Download gff for BS07973.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 458..1304 11..860 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:58:33 Download gff for BS07973.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 458..1304 11..860 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:58:33 Download gff for BS07973.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18089006..18089231 633..860 99 <- Minus
X 18089295..18089915 11..632 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:37:56 Download gff for BS07973.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17983039..17983264 633..860 99 <- Minus
arm_X 17983328..17983948 11..632 99   Minus

BS07973.complete Sequence

872 bp (872 high quality bases) assembled on 2006-01-10

> BS07973.complete
GAAGTTATCAGTCGACATGCTGTTAAGAGCTTCGCTGCAGCAGAAGCAGC
TATATGAGGAGCGCAACAACAATATTGTGGCCAAGATCAACGAAGAGGTG
ATAGAAAAACAACCAGAAGCCTGCAACATCACAAATCCAAGTGCATTTGA
TGGCTCGACGGCCAGCGATATGGAGGTCGAGCCCATGGAATGGCAGGAGT
CTATTGAAGAGGAGGCGGCACAGAATGATCAGGATGAGGCTAAGAAAGGG
GACGACACTCTATTGATGCTGCCGGCGGAGTCCATTGAAGAGGAGGCGCC
ACAGAAAGGTCAGGATGAGGCTAAGGAAGAGGACGACACTATATTGATGC
TGCAGGCGGCCGATGCCGAGGAGCTGCCCCCAAGGCTTGAGGATTACATG
TACTTTGTGCTGGACACCAACGTCCTCATACACAACCACAAGTTCGTGGA
GAGACTGACCGATGTGGTGCTGCCGGGCACGGTGGGCAGCATGCTGTACC
TTCCGTACATAGTAATCAAAGAGCTGGACAAGCTAAAGAGCAAGTACCAG
TCGGACTGCCTGCAGCGTGTGATTGCCATGCGAGCAATACGCTTTTTGAA
CACCAAGTTCGACGAAAGCTTTCAAATACAAGCTCAATCCGCTTTGGAGG
AGGCGGATCACCTGATCAAGATCGACTGCCCGGATGACAGCATTTTGAAT
TGCTGCCTGCAGCTGCAGGCGCAGGTTCCCCACATGATCCTGCTCACCAA
CGACGCGAACCTTCGGCTCAAGGCCAATGCCTCCAACATTCAGGTCTCCT
GTCGCTCTGATCTGATGTCCACCTATGTGGATGAGTTCGCTGGCTTCGGC
GATTAAAAGCTTTCTAGACCAT

BS07973.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:55:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG7206-RB 1215 CG7206-PB 375..1215 16..856 4205 100 Plus
CG7206-RB 1215 CG7206-PB 555..637 277..359 295 90.4 Plus
CG7206-RB 1215 CG7206-PB 636..718 196..278 295 90.4 Plus
CG7206-RC 474 CG7206-PC 433..474 16..57 210 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:55:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG7206-RC 1643 CG7206-RC 520..1360 16..856 4205 100 Plus
CG7206-RB 1585 CG7206-RB 462..1302 16..856 4205 100 Plus
CG7206-RC 1643 CG7206-RC 700..782 277..359 295 90.4 Plus
CG7206-RC 1643 CG7206-RC 781..863 196..278 295 90.4 Plus
CG7206-RB 1585 CG7206-RB 642..724 277..359 295 90.4 Plus
CG7206-RB 1585 CG7206-RB 723..805 196..278 295 90.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:55:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18089295..18089911 632..16 3085 100 Minus
X 23542271 X 18089008..18089233 856..631 1130 100 Minus
X 23542271 X 18089568..18089650 278..196 295 90.4 Minus
X 23542271 X 18089649..18089731 359..277 295 90.4 Minus
Blast to na_te.dros performed on 2014-11-27 13:55:19 has no hits.

BS07973.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:04:58 Download gff for BS07973.complete
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 371..1215 11..856 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:43:15 Download gff for BS07973.complete
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 427..1273 11..861 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:40 Download gff for BS07973.complete
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 463..1300 17..854 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:04:59 Download gff for BS07973.complete
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 427..1273 11..861 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:29:49 Download gff for BS07973.complete
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 463..1300 17..854 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:29:49 Download gff for BS07973.complete
Subject Subject Range Query Range Percent Splice Strand
X 18089010..18089231 633..854 100 <- Minus
X 18089295..18089910 17..632 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:40 Download gff for BS07973.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17983043..17983264 633..854 100 <- Minus
arm_X 17983328..17983943 17..632 100   Minus

BS07973.pep Sequence

Translation from 16 to 855

> BS07973.pep
MLLRASLQQKQLYEERNNNIVAKINEEVIEKQPEACNITNPSAFDGSTAS
DMEVEPMEWQESIEEEAAQNDQDEAKKGDDTLLMLPAESIEEEAPQKGQD
EAKEEDDTILMLQAADAEELPPRLEDYMYFVLDTNVLIHNHKFVERLTDV
VLPGTVGSMLYLPYIVIKELDKLKSKYQSDCLQRVIAMRAIRFLNTKFDE
SFQIQAQSALEEADHLIKIDCPDDSILNCCLQLQAQVPHMILLTNDANLR
LKANASNIQVSCRSDLMSTYVDEFAGFGD*

BS07973.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:08:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG7206-PB 404 CG7206-PB 126..404 1..279 1424 100 Plus