Clone BS07991 Report

Search the DGRC for BS07991

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:79
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptMRG15-RA
Protein status:BS07991.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS07991.3prime Sequence

906 bp (842 high quality bases) assembled on 2006-01-06

> BS07991.3prime
ATGGTCTAGAAAGCTTTTACTGTGCATTTCGCACGTACTCGGGATCAACG
TTGATAAAGTTGCTCATGCTGAAAAATATTGAGCTGTTCTTTACGAGGAA
TTTAAGGAAATCCTGCACGTGCGTGAGTAGGTTCTGCATGGACTGCTGAT
CCAACGCAGAGTAGCTGAGCATTGAGCCAAGGCGGACAAACAGACGCAGC
AGGTGAAAAGATCCGTAAAGCTCGGACAACGGTGTGTCCGGATGCTTCTG
CATCACATCCGCGTACTGGGTGCGTTCGAATTTGTACAGCAACTGGGAGC
CCAGCATTACATTGAAGTACTCTACAATTCCGTCGAGTACATCGTTTATG
GCAACCTCCTTGCTGGCACTGGTCGATTTCACGGACTTCTTGTGCGCCAA
ATACTGCTCAGAGATCTGCTGCACGGTAACCTTGGCGGGCAGCTCCAGCA
GTTTGTGCTCCCGCACCACCGCATACCAGTCGTCGGTCAGATAGTGCTTT
AACTCGTCGGGTATCTTAATCTTGACCTCCACCTTAGCTGCGTAGGCCTC
CTCGCTTTCCACACACGGTGCCGGCTCCGTGGTGGGTGTGGATGGAGTGG
TAGTGGGCGGCAACGGCTTTTCTGCTACATCGCTTCCCGTAAGAGAAGGC
CGTTGTTCGCTCATTCTTTTCTTTTTCGGCGCCACCGGCCCCTCTTCCTC
AGTGGTCTCAGCTGCGGCGGGGTCTTCCTTTTTATCACTCGGCGTGCCAG
GTCTTGCTGTGGATGGCGTCGATTGTGTGGACTTTCGGTGGGCCCGGCTG
GTTGTAGAGTTGGCGGTGCTGTTAGTAGTCGTGGTGCCAGTGCTCCCGGG
CTTCGATTTGCTTCCCGGTCCGGCGCTAGTTGGTGGTGTGCTGCTAGCGG
TCGATT

BS07991.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:59:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG6363-PA 1275 MRG15-RA 443..1275 849..17 4165 100 Minus
CG6363-PA 1275 MRG15-RA 386..438 906..854 240 98.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:03:44
Subject Length Description Subject Range Query Range Score Percent Strand
MRG15-RB 1511 CG6363-RB 477..1366 906..17 4390 99.7 Minus
MRG15-RA 1496 CG6363-RA 462..1351 906..17 4390 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:03:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15276585..15277474 17..906 4390 99.6 Plus
Blast to na_te.dros performed on 2015-02-10 19:03:43 has no hits.

BS07991.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:30:15 Download gff for BS07991.3prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-PA 386..1275 17..906 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:26:27 Download gff for BS07991.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6363-PA 386..1275 17..906 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:11:22 Download gff for BS07991.3prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 462..1353 13..906 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:24:43 Download gff for BS07991.3prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 462..1353 13..906 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:24:43 Download gff for BS07991.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 15276583..15277474 13..906 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:11:22 Download gff for BS07991.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11102305..11103196 13..906 99   Plus

BS07991.5prime Sequence

954 bp (823 high quality bases) assembled on 2006-01-06

> BS07991.5prime
GAAGTTATCAGTCGACATGGGAGAAGTAAAACCCGCTAAAGTGGAAAACT
ATAGCACGGGGACCGATGCAAACACTCTGTTCGTGGATGGGGAACGGGTT
CTGTGCTTCCACGGACCGCTCATCTACGAGGCCAAGGTTCTGAAAACAAA
ACCCGATGCGACGCCGGTTGAGTACTACATCCACTACGCGGGCTGGAGTA
AAAACTGGGACGAGTGGGTGCCCGAGAACCGAGTCCTCAAGTACAACGAT
GACAACGTCAAGCGACGTCAGGAACTGGCTCGCCAGTGCGGCGAGCGCTC
CAAGAAGGATAATAAGAAAGGCAGCGCCAAGGCCAAGAAAATGGAACAGA
TGCGGAACGAATCTCGTGCCTCGACGCCGTCTAAGGATAGCAACACCTCG
CAATCGACCGCTAGCAGCACACCAACAACTAGCGCCGGACCGGGAAGCAA
ATCGGAAGCCGGGAGCACTGGCACCACGACTACTAACAGCACCGCCAACT
CTACAACCAGCCGGGCCCACCGAAAGTCCACACAATCGACGCCATCCACA
GCAAGACCTGGCACGCCGAGTGATAAAAAGGAAGACCCCGCCGCAGCTGA
GACCACTGAGGAAGAGGGGCCGGTGGCGCCGAAAAAGAAAAGAATGAGCG
AACAACGGCCTTCTCTTACGGGAAGCGATGTAGCAGAAAAGCCGTTGCCG
CCCACTACCACTCCATCCACACCCACCACGGAGCCGGCACCGTGTGTGGA
AAGCGAGGAGGCCTACGCAGCTAAGGTGGAGGTCAAGATTAAGATACCCG
ACGAGTTAAAGCACTATCTGACCGACGACTGGTATGCGGTGGTGCGGGAG
CACAAACTGCTGAAGCTGCCCCGCCAAGTTACCGTGCAGCAGATCTCTGA
GCAGTATTTTGCGCACAAGAAGTCCGTGAAATCCGACAGTGCCCAGCAAG
GAGG

BS07991.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 17:59:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG6363-PA 1275 MRG15-RA 1..855 17..871 4250 99.8 Plus
CG6363-PA 1275 MRG15-RA 862..917 878..933 255 98.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:47:21
Subject Length Description Subject Range Query Range Score Percent Strand
MRG15-RA 1496 CG6363-RA 77..1013 17..954 4545 99.3 Plus
MRG15-RB 1511 CG6363-RB 77..1028 17..954 4385 97.7 Plus
l(3)neo43-RC 627 CG14865-RC 575..627 17..69 265 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:47:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15276923..15277557 954..319 2995 98.4 Minus
3R 32079331 3R 15277613..15277729 321..205 585 100 Minus
3R 32079331 3R 15277786..15277901 204..89 580 100 Minus
3R 32079331 3R 15277960..15278033 90..17 370 100 Minus
Blast to na_te.dros performed on 2015-02-12 06:47:20 has no hits.

BS07991.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:30:17 Download gff for BS07991.5prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-PA 1..937 17..954 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:26:28 Download gff for BS07991.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6363-PA 1..937 17..954 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 13:42:31 Download gff for BS07991.5prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1013 17..954 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:25:00 Download gff for BS07991.5prime
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1013 17..954 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:25:00 Download gff for BS07991.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 15276923..15277555 321..954 98 <- Minus
3R 15277614..15277729 205..320 100 <- Minus
3R 15277786..15277900 90..204 100 <- Minus
3R 15277961..15278033 17..89 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 13:42:31 Download gff for BS07991.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11103683..11103755 17..89 100   Minus
arm_3R 11102645..11103277 321..954 98 <- Minus
arm_3R 11103336..11103451 205..320 100 <- Minus
arm_3R 11103508..11103622 90..204 100 <- Minus

BS07991.complete Sequence

1307 bp (1307 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ636052

> BS07991.complete
GAAGTTATCAGTCGACATGGGAGAAGTAAAACCCGCTAAAGTGGAAAACT
ATAGCACGGGGACCGATGCAAACACTCTGTTCGTGGATGGGGAACGGGTT
CTGTGCTTCCACGGACCGCTCATCTACGAGGCCAAGGTTCTGAAAACAAA
ACCCGATGCGACGCCGGTTGAGTACTACATCCACTACGCGGGCTGGAGTA
AAAACTGGGACGAGTGGGTGCCCGAGAACCGAGTCCTCAAGTACAACGAT
GACAACGTCAAGCGACGTCAGGAACTGGCTCGCCAGTGCGGCGAGCGCTC
CAAGAAGGATAATAAGAAAGGCAGCGCCAAGGCCAAGAAAATGGAACAGA
TGCGGAACGAATCTCGTGCCTCGACGCCGTCTAAGGATAGCAACACCTCG
CAATCGACCGCTAGCAGCACACCAACAACTAGCGCCGGACCGGGAAGCAA
ATCGGAAGCCGGGAGCACTGGCACCACGACTACTAACAGCACCGCCAACT
CTACAACCAGCCGGGCCCACCGAAAGTCCACACAATCGACGCCATCCACA
GCAAGACCTGGCACGCCGAGTGATAAAAAGGAAGACCCCGCCGCAGCTGA
GACCACTGAGGAAGAGGGGCCGGTGGCGCCGAAAAAGAAAAGAATGAGCG
AACAACGGCCTTCTCTTACGGGAAGCGATGTAGCAGAAAAGCCGTTGCCG
CCCACTACCACTCCATCCACACCCACCACGGAGCCGGCACCGTGTGTGGA
AAGCGAGGAGGCCTACGCAGCTAAGGTGGAGGTCAAGATTAAGATACCCG
ACGAGTTAAAGCACTATCTGACCGACGACTGGTATGCGGTGGTGCGGGAG
CACAAACTGCTGGAGCTGCCCGCCAAGGTTACCGTGCAGCAGATCTCTGA
GCAGTATTTGGCGCACAAGAAGTCCGTGAAATCGACCAGTGCCAGCAAGG
AGGTTGCCATAAACGATGTACTCGACGGAATTGTAGAGTACTTCAATGTA
ATGCTGGGCTCCCAGTTGCTGTACAAATTCGAACGCACCCAGTACGCGGA
TGTGATGCAGAAGCATCCGGACACACCGTTGTCCGAGCTTTACGGATCTT
TTCACCTGCTGCGTCTGTTTGTCCGCCTTGGCTCAATGCTCAGCTACTCT
GCGTTGGATCAGCAGTCCATGCAGAACCTACTCACGCACGTGCAGGATTT
CCTTAAATTCCTCGTAAAGAACAGCTCAATATTTTTCAGCATGAGCAACT
TTATCAACGTTGATCCCGAGTACGTGCGAAATGCACAGTAAAAGCTTTCT
AGACCAT

BS07991.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:21:50
Subject Length Description Subject Range Query Range Score Percent Strand
MRG15-RA 1275 CG6363-PA 1..1275 17..1291 6375 100 Plus
MRG15-RB 1290 CG6363-PB 1..1290 17..1291 6190 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:21:51
Subject Length Description Subject Range Query Range Score Percent Strand
MRG15-RA 1496 CG6363-RA 77..1351 17..1291 6375 100 Plus
MRG15-RB 1511 CG6363-RB 77..1366 17..1291 6190 98.8 Plus
l(3)neo43-RC 627 CG14865-RC 575..627 17..69 265 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:21:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15276585..15277557 1291..319 4865 100 Minus
3R 32079331 3R 15277613..15277729 321..205 585 100 Minus
3R 32079331 3R 15277786..15277901 204..89 580 100 Minus
3R 32079331 3R 15277960..15278033 90..17 370 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:21:49 has no hits.

BS07991.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:04:49 Download gff for BS07991.complete
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 1..1275 17..1291 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:43:01 Download gff for BS07991.complete
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1353 17..1295 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:49:55 Download gff for BS07991.complete
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1349 17..1289 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:04:49 Download gff for BS07991.complete
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1353 17..1295 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:16:44 Download gff for BS07991.complete
Subject Subject Range Query Range Percent Splice Strand
MRG15-RA 77..1349 17..1289 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:16:44 Download gff for BS07991.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15276587..15277555 321..1289 100 <- Minus
3R 15277614..15277729 205..320 100 <- Minus
3R 15277786..15277900 90..204 100 <- Minus
3R 15277961..15278033 17..89 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:49:55 Download gff for BS07991.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11102309..11103277 321..1289 100 <- Minus
arm_3R 11103336..11103451 205..320 100 <- Minus
arm_3R 11103508..11103622 90..204 100 <- Minus
arm_3R 11103683..11103755 17..89 100   Minus

BS07991.pep Sequence

Translation from 16 to 1290

> BS07991.pep
MGEVKPAKVENYSTGTDANTLFVDGERVLCFHGPLIYEAKVLKTKPDATP
VEYYIHYAGWSKNWDEWVPENRVLKYNDDNVKRRQELARQCGERSKKDNK
KGSAKAKKMEQMRNESRASTPSKDSNTSQSTASSTPTTSAGPGSKSEAGS
TGTTTTNSTANSTTSRAHRKSTQSTPSTARPGTPSDKKEDPAAAETTEEE
GPVAPKKKRMSEQRPSLTGSDVAEKPLPPTTTPSTPTTEPAPCVESEEAY
AAKVEVKIKIPDELKHYLTDDWYAVVREHKLLELPAKVTVQQISEQYLAH
KKSVKSTSASKEVAINDVLDGIVEYFNVMLGSQLLYKFERTQYADVMQKH
PDTPLSELYGSFHLLRLFVRLGSMLSYSALDQQSMQNLLTHVQDFLKFLV
KNSSIFFSMSNFINVDPEYVRNAQ*

BS07991.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:33:16
Subject Length Description Subject Range Query Range Score Percent Strand
MRG15-PA 424 CG6363-PA 1..424 1..424 2193 100 Plus
MRG15-PB 429 CG6363-PB 1..429 1..424 2177 98.8 Plus