Clone Sequence Records
BS08076.3prime Sequence
923 bp (802 high quality bases) assembled on 2006-01-06
> BS08076.3prime
ATGGTCTAGAAAGCTTTTATTTCACCGTACTGGTCACCGTCCCCGCAGTC
GCCGTTGAGTTGATCTGCACACTGCCCACGTCCTTGTGGTGATCGCCCGT
GGCGCTTGAGTCCATGCTCGTCTCGGAGTAGTCCAGTTTGTAGCTAGCGC
TTCGAGTCACATCCTCCATCGACGCCTCCTGGCATTCTCGCCCGCTGTGC
GTCTGCGATCCACAGTTGTAGCAGGAGATCACTTTCGGCGCGGTTCCGCC
ACCACCCGCTCCCGTGATGGGGCAGACAGTGAGGGCACTGTACGGCGTCG
TGCTGGGGACTTGCTGCTGCTGTGGCGTCGGCACCGTCTGCACGCTCACC
GCGTTCGTACTGACCACGGCCGCTGTGCTTTGGAGCTGGGCAGGCGTTAC
CGCGGTAGGAGTTCCTCCCGCTGTCATTGGCAGGAAGGCCAGGCTGGTGT
GGAAGGTCGGGTAAATAAGCTCACCGTTGTGTGGCGGACCCATCGGATAA
CGGAAGCCACCACGCACCGTCTGGGGAGGCGGCGCACTATGCGCTTGGAA
TATCGTCTGCTGTGGCGGCGGGGGTCCTCGCTGGTGATATGGATAGCTTG
TGTTGTAGGTTGTGGGCGGCGGTTGTTGCGGCTGCAGGAGCACCGTTGTC
GTGGGTGTGCTCACCGGAGACTGGCTGATGAGAAGGGTCTGGGGCTGCTG
CTGCTGCAGGCTGGCGCTGCTGATGGTCTGTGCATCGCTGACGATGCTTG
GCGTGCCCGTTGTGTAAACCTGCTGATAGGTCTTATCCATCCCATTGCGT
CCGTTTAGCCGCTGCTGCAGATTCATTTGCTGCTGCTGCTGCTTGTAGCT
GAAGTGGTGTGGCTTCGGCTGATAGTTTCCCAGACCGGTGGGCAGTACTG
TCGTGATCATGCCCATTCCCGCA
BS08076.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:01:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10492-PA | 2433 | CG10492-RA | 1527..2433 | 923..17 | 4535 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 07:27:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10492-RB | 4096 | CG10492-RB | 2300..3206 | 923..17 | 4535 | 100 | Minus |
CG10492-RA | 4507 | CG10492-RA | 2300..3206 | 923..17 | 4535 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 07:27:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19056614..19057520 | 923..17 | 4535 | 100 | Minus |
Blast to na_te.dros performed 2015-02-01 07:27:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6738..6946 | 873..672 | 196 | 62.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6688..6899 | 899..694 | 189 | 59.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6957 | 851..615 | 171 | 56.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2317..2505 | 876..674 | 169 | 61.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6774..6964 | 873..677 | 165 | 59.8 | Minus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 151..221 | 875..806 | 127 | 66.2 | Minus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9181..9251 | 875..806 | 127 | 66.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1525..1604 | 873..795 | 118 | 65.9 | Minus |
BS08076.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:32:53 Download gff for
BS08076.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-PA | 1528..2433 | 17..922 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:29:46 Download gff for
BS08076.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-PA | 1528..2433 | 17..922 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:14:41 Download gff for
BS08076.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-RA | 2301..3206 | 17..922 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:44:09 Download gff for
BS08076.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-RA | 2301..3206 | 17..922 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 09:44:09 Download gff for
BS08076.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19056615..19057520 | 17..922 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:14:41 Download gff for
BS08076.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19056615..19057520 | 17..922 | 100 | | Minus |
BS08076.5prime Sequence
975 bp (859 high quality bases) assembled on 2006-01-06
> BS08076.5prime
GAAGTTATCAGTCGACATGATTTGCAAACAGGACGTTCTGCAGTGGTTTG
AGAAACTCGAGAGCTACAATCGGATCGAAACGATGTACGCCCTGCTCACC
GCCTGCCTGCCATTCGAGCTGCGATTTTTGGGCACGCTCCTCGAGGAGCA
GGGCCGTTGCGACTCGGAGACGCTGCGAGGCATGGAGCTGCGGGCGAATA
ACCCGCACGAGCTGGCCGCCGACATGGTGAACTGCCAGAAGGGCGATCCC
ACCGACCGGAAGATCCGGCGCAAGATGGCCCTGTATCTGGCGCTTATCCG
TGCCTGCAATCGGAACTGCGTCAGTGAGATCTACCGCACGCTGGAATGCT
GGGGCGAGTGCGATTTCAGTTGCATTAATGATCAGGACACGCTGTTGGAG
CTGCTGCTGGTCTACACGATGGCAGCCATCCACCCGGTGTTCTCCATGGA
GGAGCAAAAGAAGATTTTCGGCATTCTGGCTAAGATCAAGGAGAACAAGT
TGGTAGCAGAGCGATTCGCGCCTCAAATGCAAAGACAGACACAGACGCCA
GTGCTCCAGCATCCTCACCCGCCGTCCCCACATGACCTGGTCATTCAGCA
GCAGCCACCACACGTGATCCACCAAATACCAGGACCGCAGCAGGCGCCCC
CGCACCCGCAACATCCTCAAATGGTGCAGGTACTGCAGACGCCGCAGGGC
AACATACCCATGATCTTTCCCCAGCACTTTCAAAAGCTTCTGCCCAGCTC
TGATGGAACGCACCAGATCAGTGTCGATGGCATGCCGCACCTGATGCAGC
CTAACATCACCATTCCAGCGGACACTAGTGCCATCATCAGTCACCAGAAC
ACGGGATGGACGATGCGTCACTACGTGCCACAACCGCCCCACCACAGCCC
GCTCTGCAGCAACAGCAGCCGCAGAGTCTGGACCATCAAGTGCCACCTGC
CAGCTCGCCGATGCTGAGTCAGCAA
BS08076.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:01:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10492-PA | 2433 | CG10492-RA | 1..878 | 17..894 | 4390 | 100 | Plus |
CG10492-PA | 2433 | CG10492-RA | 879..960 | 894..975 | 410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:30:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10492-RB | 4096 | CG10492-RB | 774..1733 | 17..975 | 4775 | 99.9 | Plus |
CG10492-RA | 4507 | CG10492-RA | 774..1733 | 17..975 | 4775 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:30:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19054851..19055570 | 17..736 | 3600 | 100 | Plus |
2L | 23513712 | 2L | 19055627..19055868 | 735..975 | 1160 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:30:23 has no hits.
BS08076.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:32:54 Download gff for
BS08076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-PA | 1..958 | 17..973 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:29:47 Download gff for
BS08076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-PA | 1..958 | 17..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:29:54 Download gff for
BS08076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-RA | 768..1731 | 11..973 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:40:18 Download gff for
BS08076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-RA | 768..1731 | 11..973 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 23:40:18 Download gff for
BS08076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19054845..19055570 | 11..736 | 99 | -> | Plus |
2L | 19055629..19055866 | 737..973 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:29:54 Download gff for
BS08076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19054845..19055570 | 11..736 | 99 | -> | Plus |
arm_2L | 19055629..19055866 | 737..973 | 99 | | Plus |
BS08076.complete Sequence
2465 bp assembled on 2008-01-03
GenBank Submission: FJ636092
> BS08076.complete
GAAGTTATCAGTCGACATGATTTGCAAACAGGACGTTCTGCAGTGGTTTG
AGAAACTCGAGAGCTACAATCGGATCGAAACGATGTACGCCCTGCTCACC
GCCTGCCTGCCATTCGAGCTGCGATTTTTGGGCACGCTCCTCGAGGAGCA
GGGCCGTTGCGACTCGGAGACGCTGCGAGGCATGGAGCTGCGGGCGAATA
ACCCGCACGAGCTGGCCGCCGACATGGTGAACTGCCAGAAGGGCGATCCC
ACCGACCGGAAGATCCGGCGCAAGATGGCCCTGTATCTGGCGCTTATCCG
TGCCTGCAATCGGAACTGCGTCAGTGAGATCTACCGCACGCTGGAATGCT
GGGGCGAGTGCGATTTCAGTTGCATTAATGATCAGGACACGCTGTTGGAG
CTGCTGCTGGTCTACACGATGGCAGCCATCCACCCGGTGTTCTCCATGGA
GGAGCAAAAGAAGATTTTCGGCATTCTGGCTAAGATCAAGGAGAACAAGT
TGGTAGCAGAGCGATTCGCGCCTCAAATGCAAAGACAGACACAGACGCCA
GTGCTCCAGCATCCTCACCCGCCGTCCCCACATGACCTGGTCATTCAGCA
GCAGCCACCACACGTGATCCACCAAATACCAGGACCGCAGCAGGCGCCCC
CGCACCCGCAACATCCTCAAATGGTGCAGGTACTGCAGACGCCGCAGGGC
AACATACCCATGATCTTTCCCCAGCACTTTCAAAAGCTTCTGCCCAGCTC
TGATGGAACGCACCAGATCAGTGTCGATGGCATGCCGCACCTGATGCAGC
CTAACATCACCATTCCAGCGGACACTAGTGCCATCATCAGTCACCAGAAC
ACGGGATGGACGATGCGTCACTACGTGCCACAACCGCCCCACCAACAGCC
CGCTCTGCAGCAACAGCAGCCGCAGAGTCTGGACCATCAAGTGCCACCTG
CCAGCTCGCCGATGCTGAGTCAGCAATCCTCGCCATCGAGTAGTCGCACC
ACGAGTCCTCAGCGGGACCGCTCCCTTATTAACGTTCCACTGCAGGCGCA
GCAGCAACCACATCAGCAGCAGCAGATGAGGGGCATGTCCCAGCGAATGG
CGGATCAGAAGAACACGCGGCGTCCCTCGGCGGAGACTACCCCGCCGCCA
ACCTCAATTGGCGGCGAGCAGCAGCACGATAGTGTCAACGAAGGCGGAAG
CAGTAATTCCAGCGGAACCAGTCTGCACAGACTCATCCGCAACGGTTTTC
CGCGTCTAGGACACAATCATCGAGTCAAGGCAAATACCTTCATACCACAG
CACCAGCAACAACAGCAGCAGCATCACTTTCAGAACCCCAACTACAACAT
GAACGTTATGATGCAGAGTATGAATATAAACGACGATGGCAGTGGATCGA
TGATGAATTCCATGAACTCCACCAAAAGTGCAGCTACCACGGGTAGTGAA
TCGGGCAGCTCGAATGGATCCTGTGGTGACCTGTCGCCCTCTGAGACGCC
AACGCCCACGCAGCTCTCACTGCCACTGCACAATTCGGTGGATGCGGGAA
TGGGCATGATCACGACAGTACTGCCCACCGGTCTGGGAAACTATCAGCCG
AAGCCACACCACTTCAGCTACAAGCAGCAGCAGCAGCAAATGAATCTGCA
GCAGCGGCTAAACGGACGCAATGGGATGGATAAGACCTATCAGCAGGTTT
ACACAACGGGCACGCCAAGCATCGTCAGCGATGCACAGACCATCAGCAGC
GCCAGCCTGCAGCAGCAGCAGCCCCAGACCCTTCTCATCAGCCAGTCTCC
GGTGAGCACACCCACGACAACGGTGCTCCTGCAGCCGCAACAACCGCCGC
CCACAACCTACAACACAAGCTATCCATATCACCAGCGAGGACCCCCGCCG
CCACAGCAGACGATATTCCAAGCGCATAGTGCGCCGCCTCCCCAGACGGT
GCGTGGTGGCTTCCGTTATCCGATGGGTCCGCCACACAACGGTGAGCTTA
TTTACCCGACCTTCCACACCAGCCTGGCCTTCCTGCCAATGACAGCGGGA
GGAACTCCTACCGCGGTAACGCCTGCCCAGCTCCAAAGCACAGCGGCCGT
GGTCAGTACGAACGCGGTGAGCGTGCAGACGGTGCCGACGCCACAGCAGC
AGCAAGTCCCCAGCACGACGCCGTACAGTGCCCTCACTGTCTGCCCCATC
ACGGGAGCGGGTGGTGGCGGAACCGCGCCGAAAGTGATCTCCTGCTACAA
CTGTGGATCGCAGACGCACAGCGGGCGAGAATGCCAGGAGGCGTCGATGG
AGGATGTGACTCGAAGCGCTAGCTACAAACTGGACTACTCCGAGACGAGC
ATGGACTCAAGCGCCACGGGCGATCACCACAAGGACGTGGGCAGTGTGCA
GATCAACTCAACGGCGACTGCGGGGACGGTGACCAGTACGGTGAAATAAA
AGCTTTCTAGACCAT
BS08076.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:00:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10492-RB | 2433 | CG10492-PB | 1..2433 | 17..2449 | 12165 | 100 | Plus |
CG10492-RA | 2433 | CG10492-PA | 1..2433 | 17..2449 | 12165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:00:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10492-RB | 4096 | CG10492-RB | 774..3206 | 17..2449 | 12165 | 100 | Plus |
CG10492-RA | 4507 | CG10492-RA | 774..3206 | 17..2449 | 12165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:59:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19056252..19057520 | 1181..2449 | 6345 | 100 | Plus |
2L | 23513712 | 2L | 19054851..19055570 | 17..736 | 3600 | 100 | Plus |
2L | 23513712 | 2L | 19055627..19056072 | 735..1180 | 2230 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 01:00:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6688..6899 | 1567..1772 | 189 | 59.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6774..6964 | 1593..1789 | 165 | 59.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2317..2504 | 1590..1777 | 164 | 58.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2345..2490 | 1294..1440 | 156 | 60 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..7037 | 1037..1351 | 155 | 56 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2379..2435 | 1295..1350 | 147 | 75.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6826..6884 | 1294..1354 | 147 | 73.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6834 | 1298..1349 | 145 | 77.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2634..2685 | 1298..1348 | 140 | 76.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2343..2673 | 1037..1364 | 139 | 55.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2282..2380 | 1250..1349 | 136 | 64.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6794 | 1298..1354 | 136 | 73.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6846 | 1295..1349 | 133 | 73.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6810 | 1298..1349 | 129 | 75 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 151..221 | 1591..1660 | 127 | 66.2 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9181..9251 | 1591..1660 | 127 | 66.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6711..6867 | 1289..1445 | 126 | 56.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2801..2860 | 1294..1352 | 126 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2391..2422 | 1295..1326 | 124 | 87.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6827..6858 | 1043..1074 | 124 | 87.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2357 | 1037..1075 | 123 | 79.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2360 | 1037..1075 | 123 | 79.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2327..2394 | 877..947 | 123 | 66.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1112..1161 | 1298..1349 | 120 | 73.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1557..1585 | 1298..1326 | 118 | 89.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2404 | 1295..1391 | 118 | 59.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1061..1096 | 1043..1078 | 117 | 80.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1067..1162 | 1298..1392 | 117 | 59.4 | Plus |
BS08076.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:09:07 Download gff for
BS08076.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-RB | 1..2433 | 17..2449 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:36:19 Download gff for
BS08076.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-RB | 771..3201 | 17..2447 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:36:05 Download gff for
BS08076.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-RA | 774..3204 | 17..2447 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:09:07 Download gff for
BS08076.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-RB | 765..3203 | 11..2449 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:42:04 Download gff for
BS08076.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10492-RA | 774..3204 | 17..2447 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:42:04 Download gff for
BS08076.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19054851..19055570 | 17..736 | 100 | -> | Plus |
2L | 19055629..19056072 | 737..1180 | 100 | -> | Plus |
2L | 19056252..19057518 | 1181..2447 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:36:05 Download gff for
BS08076.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19054851..19055570 | 17..736 | 100 | -> | Plus |
arm_2L | 19055629..19056072 | 737..1180 | 100 | -> | Plus |
arm_2L | 19056252..19057518 | 1181..2447 | 100 | | Plus |
BS08076.pep Sequence
Translation from 16 to 2448
> BS08076.pep
MICKQDVLQWFEKLESYNRIETMYALLTACLPFELRFLGTLLEEQGRCDS
ETLRGMELRANNPHELAADMVNCQKGDPTDRKIRRKMALYLALIRACNRN
CVSEIYRTLECWGECDFSCINDQDTLLELLLVYTMAAIHPVFSMEEQKKI
FGILAKIKENKLVAERFAPQMQRQTQTPVLQHPHPPSPHDLVIQQQPPHV
IHQIPGPQQAPPHPQHPQMVQVLQTPQGNIPMIFPQHFQKLLPSSDGTHQ
ISVDGMPHLMQPNITIPADTSAIISHQNTGWTMRHYVPQPPHQQPALQQQ
QPQSLDHQVPPASSPMLSQQSSPSSSRTTSPQRDRSLINVPLQAQQQPHQ
QQQMRGMSQRMADQKNTRRPSAETTPPPTSIGGEQQHDSVNEGGSSNSSG
TSLHRLIRNGFPRLGHNHRVKANTFIPQHQQQQQQHHFQNPNYNMNVMMQ
SMNINDDGSGSMMNSMNSTKSAATTGSESGSSNGSCGDLSPSETPTPTQL
SLPLHNSVDAGMGMITTVLPTGLGNYQPKPHHFSYKQQQQQMNLQQRLNG
RNGMDKTYQQVYTTGTPSIVSDAQTISSASLQQQQPQTLLISQSPVSTPT
TTVLLQPQQPPPTTYNTSYPYHQRGPPPPQQTIFQAHSAPPPQTVRGGFR
YPMGPPHNGELIYPTFHTSLAFLPMTAGGTPTAVTPAQLQSTAAVVSTNA
VSVQTVPTPQQQQVPSTTPYSALTVCPITGAGGGGTAPKVISCYNCGSQT
HSGRECQEASMEDVTRSASYKLDYSETSMDSSATGDHHKDVGSVQINSTA
TAGTVTSTVK*
BS08076.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:39:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10492-PB | 810 | CG10492-PB | 1..810 | 1..810 | 4307 | 100 | Plus |
CG10492-PA | 810 | CG10492-PA | 1..810 | 1..810 | 4307 | 100 | Plus |
rg-PQ | 3785 | CG44835-PQ | 2102..2497 | 209..603 | 183 | 23.2 | Plus |
ptip-PA | 2294 | CG32133-PA | 1007..1567 | 173..738 | 181 | 22.4 | Plus |
ptip-PA | 2294 | CG32133-PA | 286..829 | 148..714 | 176 | 22.2 | Plus |
kis-PF | 5191 | CG3696-PF | 560..1112 | 155..666 | 174 | 23.4 | Plus |