Clone Sequence Records
BS08095.3prime Sequence
974 bp (768 high quality bases) assembled on 2006-01-06
> BS08095.3prime
ATGGTCTAGAAAGCTTTCAATTTTTCAAGCTTCCTTTAAAAGATTGTAGT
CTTTGGAGGCGTCTAAAGGTGGGACTAATAAAGCGCCCGGCCAAAGCGCG
CAAATACGAAGATATTTTGGAGCATGCATACATCAAGGCAGCAAGGGTAT
TTTTTGCTGCAGATGACCAAACTGGTCTGGAGTTATGAACCAAACCAGCA
ATGGTTGCTGGTGTTGCCTTCCCCCATTTCGGTGTAGTTGCCCAATTTAG
AAGAGAGCGCAGATATGAAACCGCTGAGGACCAAACTGTTTTCAAAGCTG
AATATGGTCCAGCTCGTGATCCCTGGGAAAGTGTTTTAGCGACTGTTTCC
GTAGCAGAATTCACTGAAGCTTTGCTTGGTAGGGATTTCACAGCCACGTT
CGCAGCCGATGCTAAGGACGAACTGGAAGTTGCAGAAGAACCTACGGCTC
TTTGGCCTCGGATTACTGTTTTGGCCACGACTTTGGCAGCCGAAGAAAAG
GGCGCGTTCAGAGTCCTAGGAGAAACTCGAGTATTTGCCCATGGCGCCAG
TTTGCCGAGTCCCAGTATTCTTTTCGATCTCAATGCCAATAGCCCGGAGG
ACAATGTCCATAGGGATCCGAGATGCGAATCGCTTAGTTCCTGCGTTGGA
ATTGGCCGGGGAACTGGGATAGATGGCGGCGGTTTCTGGAATACCCGGTA
CCCCACGTATGTACCAACCAGCAAGCCTCCGATGAAGGCAGCAACTTTGA
GCTTTTCGCGAAAACTAGCAGGCGGCGTTTCGGGTGGCATTGGGAAGAAT
GGATTTCCCAATTCANGCAGTTGGCCATTAGCGTTCTCAGCGGGGATAAT
GGCTTCAACGTCCATGGACTGAAAGCAGCAATCGTACAAGGCCCTTCTCT
GATGGTCAATCANGACGCGATGGGCCTCGTTGATTCTAAGGAACTCCTTC
GCTCATCCTCGTTTTTGTCGGGAT
BS08095.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:01:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-PA | 1062 | CG7133-RA | 125..1062 | 954..17 | 4602 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:30:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-RA | 1456 | CG7133-RA | 291..1251 | 974..15 | 4728 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:30:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22073273..22074233 | 15..974 | 4703 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:30:16 has no hits.
BS08095.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:33:27 Download gff for
BS08095.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-PA | 104..1062 | 17..974 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:30:31 Download gff for
BS08095.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-PA | 104..1062 | 17..974 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:33:04 Download gff for
BS08095.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 291..1255 | 11..974 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:53:45 Download gff for
BS08095.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 291..1255 | 11..974 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:53:45 Download gff for
BS08095.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22073269..22074233 | 11..974 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:33:04 Download gff for
BS08095.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22066369..22067333 | 11..974 | 99 | | Plus |
BS08095.5prime Sequence
871 bp (799 high quality bases) assembled on 2006-01-06
> BS08095.5prime
GAAGTTATCAGTCGACATGAGCGATGTCTACGAAGATCACTACCAGGTTC
TGGGCTTACCGAGAAATGCCACCGACAGTGAGATTAAGGATGCTTTTCGG
CGGCTGTCCCTGCAATATCATCCCGACAAAAACGAGGATGGAGCGAAGGA
GTTCCTTAGAATCAACGAGGCCCATCGCGTCCTGATTGACCATCAGAGAA
GGGCCTTGTACGATTGCTGCTTCCAGTCCATGGACGTTGAAGCCATTATT
CCCGCTGAGAACGCTAATGGCCAACTGCCTGAATTGGGAAATCCATTCTT
CCCAATGCCACCCGAAACGCCGCCTGCTAGTTTTCGCGAAAAGCTCAAAG
TTGCTGCCTTCATCGGAGGCTTGCTGGTTGGTACATACGTGGGGTACCGG
GTATTCCAGAAACCGCCGCCATCTATCCCAGTTCCCCGGCCAATTCCAAC
GCAGGAACTAAGCGATTCGCATCTCGGATCCCTATGGACATTGTCCTCCG
GGCTATTGGCATTGAGATCGAAAAGAATACTGGGACTCGGCAAACTGGCG
CCATGGGCAAATACTCGAGTTTCTCCTAGGACTCTGAACGCGCCCTTTTC
TTCGGCTGCCAAAGTCGTGGCCAAAACAGTAATCCGAGGCCAAAGAGCCG
TAGGTTCTTCTGCAACTTCCAGTTCGTCCTTAGCATCGGCTGCGAACGTG
GCTGTGAAATCCCTACCAAGCAAAGCTTCAGTGAATTCTGCTACGGAAAC
AGTCGCTAAAACACTTTCCCAGGGATCACGAGCTGGACCATATTCAGCTT
TGAAAACAGTTTGGTCCTCAGCGGTTTCATATCTGCGCTCTCTTCTAAAT
TGGGCAACTACACCGAAATGG
BS08095.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:01:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-PA | 1062 | CG7133-RA | 1..855 | 17..871 | 4275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:01:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-RA | 1456 | CG7133-RA | 188..1042 | 17..871 | 4275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:01:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22073482..22074336 | 871..17 | 4275 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 23:01:49 has no hits.
BS08095.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:33:29 Download gff for
BS08095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-PA | 1..855 | 17..871 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:30:32 Download gff for
BS08095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-PA | 1..855 | 17..871 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:26:36 Download gff for
BS08095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 188..1042 | 17..871 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:16:04 Download gff for
BS08095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 188..1042 | 17..871 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:16:04 Download gff for
BS08095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22073482..22074336 | 17..871 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:26:36 Download gff for
BS08095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22066582..22067436 | 17..871 | 100 | | Minus |
BS08095.complete Sequence
1094 bp (1094 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ636100
> BS08095.complete
GAAGTTATCAGTCGACATGAGCGATGTCTACGAAGATCACTACCAGGTTC
TGGGCTTACCGAGAAATGCCACCGACAGTGAGATTAAGGATGCTTTTCGG
CGGCTGTCCCTGCAATATCATCCCGACAAAAACGAGGATGGAGCGAAGGA
GTTCCTTAGAATCAACGAGGCCCATCGCGTCCTGATTGACCATCAGAGAA
GGGCCTTGTACGATTGCTGCTTCCAGTCCATGGACGTTGAAGCCATTATT
CCCGCTGAGAACGCTAATGGCCAACTGCCTGAATTGGGAAATCCATTCTT
CCCAATGCCACCCGAAACGCCGCCTGCTAGTTTTCGCGAAAAGCTCAAAG
TTGCTGCCTTCATCGGAGGCTTGCTGGTTGGTACATACGTGGGGTACCGG
GTATTCCAGAAACCGCCGCCATCTATCCCAGTTCCCCGGCCAATTCCAAC
GCAGGAACTAAGCGATTCGCATCTCGGATCCCTATGGACATTGTCCTCCG
GGCTATTGGCATTGAGATCGAAAAGAATACTGGGACTCGGCAAACTGGCG
CCATGGGCAAATACTCGAGTTTCTCCTAGGACTCTGAACGCGCCCTTTTC
TTCGGCTGCCAAAGTCGTGGCCAAAACAGTAATCCGAGGCCAAAGAGCCG
TAGGTTCTTCTGCAACTTCCAGTTCGTCCTTAGCATCGGCTGCGAACGTG
GCTGTGAAATCCCTACCAAGCAAAGCTTCAGTGAATTCTGCTACGGAAAC
AGTCGCTAAAACACTTTCCCAGGGATCACGAGCTGGACCATATTCAGCTT
TGAAAACAGTTTGGTCCTCAGCGGTTTCATATCTGCGCTCTCTTCTAAAT
TGGGCAACTACACCGAAATGGGGGAAGGCAACACCAGCAACCATTGCTGG
TTTGGTTCATAACTCCAGACCAGTTTGGTCATCTGCAGCAAAAAATACCC
TTGCTGCCTTGATGTATGCATGCTCCAAAATATCTTCGTATTTGCGCGCT
TTGGCCGGGCGCTTTATTAGTCCCACCTTTAGACGCCTCCAAAGACTACA
ATCTTTTAAAGGAAGCTTGAAAAATTGAAAGCTTTCTAGACCAT
BS08095.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:30:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-RA | 1062 | CG7133-PA | 1..1062 | 17..1078 | 5310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-RA | 1456 | CG7133-RA | 188..1251 | 17..1080 | 5320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:29:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22073273..22074336 | 1080..17 | 5320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:30:00 has no hits.
BS08095.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:04:27 Download gff for
BS08095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 1..1062 | 17..1078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:42:38 Download gff for
BS08095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 187..1254 | 17..1084 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:10:39 Download gff for
BS08095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 188..1248 | 17..1077 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:04:28 Download gff for
BS08095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 187..1254 | 17..1084 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:22:34 Download gff for
BS08095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7133-RA | 188..1248 | 17..1077 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:22:34 Download gff for
BS08095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22073276..22074336 | 17..1077 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:10:39 Download gff for
BS08095.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22066376..22067436 | 17..1077 | 100 | | Minus |
BS08095.pep Sequence
Translation from 16 to 1077
> BS08095.pep
MSDVYEDHYQVLGLPRNATDSEIKDAFRRLSLQYHPDKNEDGAKEFLRIN
EAHRVLIDHQRRALYDCCFQSMDVEAIIPAENANGQLPELGNPFFPMPPE
TPPASFREKLKVAAFIGGLLVGTYVGYRVFQKPPPSIPVPRPIPTQELSD
SHLGSLWTLSSGLLALRSKRILGLGKLAPWANTRVSPRTLNAPFSSAAKV
VAKTVIRGQRAVGSSATSSSSLASAANVAVKSLPSKASVNSATETVAKTL
SQGSRAGPYSALKTVWSSAVSYLRSLLNWATTPKWGKATPATIAGLVHNS
RPVWSSAAKNTLAALMYACSKISSYLRALAGRFISPTFRRLQRLQSFKGS
LKN*
BS08095.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:33:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7133-PA | 353 | CG7133-PA | 1..353 | 1..353 | 1803 | 100 | Plus |
| CG32641-PA | 132 | CG32641-PA | 3..123 | 6..131 | 174 | 34.1 | Plus |
| CG32640-PA | 132 | CG32640-PA | 3..123 | 6..131 | 174 | 34.1 | Plus |
| CG5001-PC | 346 | CG5001-PC | 3..65 | 6..66 | 169 | 49.2 | Plus |
| CG5001-PD | 350 | CG5001-PD | 3..65 | 6..66 | 169 | 49.2 | Plus |
