Clone BS08131 Report

Search the DGRC for BS08131

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:81
Well:31
Vector:pDNR-Dual
Associated Gene/Transcriptexu-RA
Protein status:BS08131.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS08131.3prime Sequence

806 bp (805 high quality bases) assembled on 2006-01-06

> BS08131.3prime
ATGGTCTAGAAAGCTTTTAGTTGGAGGCCGTGATGGCCACCGGTGTCGGT
GAGGGTTGTGCCACGACTGGGCTTATGGTTACGGCAGGTGGAGCGCTATT
GTTGAGCTCAGACACGCCTGAGGAGGATATTTCAGCAGCAACCTTGAGTC
CATTGGGGGTTGCACCCAAGCTTTGACGCGAGTTGCGCTTACGGTGCATA
CGCGGCTTGTTTGGCGAGGGAGTCTTGGTAGTAGAGTCGGGCAACGAGGA
AACGCTGCGCGACTTGTCACCTCCTGCTCCAAACTCGGTGCTAGCCGATG
GGGAGCTGGATGGCCTAGCGTCCTTCACCGATTGGCGGCCGCCGCGTCGA
TTGCGACGACGATAATTGTTATTATTGTTGCTGTTACCCTTGACAACCGG
CTTCACCGTGGTCTTCTTGGGATCGAAATAGCTGTCCAGAAGCTCGAGCA
GCTCCGCCTTGTCCTTGCTCTTTAGCCGGCCAATTGACTGCAGGGCTATG
TCCAGGCCCTCGATGTTTTTCTCTGCCCAGATGGCACTTAGCGTGTTCAA
ATCGAACCCATTCTCGGCCAGCACAATGCGGAACTTTACGGCACGCACAC
GATGGTACAGAGTGGTCTTGAAGTAGTTCAGGAACACCGGACGGAAGGAG
TTTTGACGCTCCAAATTTTCGATCTGGATATCCAGCTCCAGGACATCGGA
CACCACCAACTTGGCAAACGGACGTATGGCATTAAACATATTCTCCAATG
CCTCCGAGCTTTTTGGTTCCGGCTTGCCGTCGGAGTTGCTCAGCTGAAGG
GCCACA

BS08131.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:02:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG8994-PA 1599 exu-RA 810..1599 806..17 3950 100 Minus
CG8994-PB 1599 exu-RB 810..1599 806..17 3950 100 Minus
CG8994-PC 1599 exu-RC 810..1599 806..17 3950 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
exu-RD 2631 CG8994-RD 961..1752 806..15 3960 100 Minus
exu-RC 2621 CG8994-RC 951..1742 806..15 3960 100 Minus
exu-RB 1988 CG8994-RB 951..1742 806..15 3960 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:57:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20668598..20669389 15..806 3960 100 Plus
Blast to na_te.dros performed on 2015-02-12 11:57:39 has no hits.

BS08131.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:34:28 Download gff for BS08131.3prime
Subject Subject Range Query Range Percent Splice Strand
exu-PB 811..1599 17..805 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:31:46 Download gff for BS08131.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8994-PC 811..1599 17..805 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:48:11 Download gff for BS08131.3prime
Subject Subject Range Query Range Percent Splice Strand
exu-RB 952..1751 8..805 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:04:45 Download gff for BS08131.3prime
Subject Subject Range Query Range Percent Splice Strand
exu-RB 952..1751 8..805 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:04:45 Download gff for BS08131.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 20668589..20669388 8..805 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:48:11 Download gff for BS08131.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16556094..16556893 8..805 99   Plus

BS08131.5prime Sequence

913 bp (852 high quality bases) assembled on 2006-01-06

> BS08131.5prime
GAAGTTATCAGTCGACATGGTTGCCGATAACATCGATGCCGGAGTGGCCA
TTGCCGTCGCCGATCAATCCTCGTCGCCCGTGGGCGATAAAGTTGAGCTG
CCGGCCGGTAATTATATCCTGGTGGGCGTGGATATCGACACCACTGGACG
TCGTCTAATGGATGAGATTGTCCAGCTGGCCGCTTATACACCCACCGACC
ACTTCGAGCAGTACATCATGCCATATATGAATCTGAATCCAGCTGCTCGC
CAGCGTCATCAAGTTCGTGTTATTTCGATTGGCTTTTATCGTATGCTGAA
GTCGATGCAGACTTATAAGATCATTAAATCCAAGTCTGAGATCGCTGCCC
TCAAGGACTTCCTCAACTGGCTTGAGCAACTGAAGACCAAGGCGGGTCCC
AGCTCGGACGGGATTGTGCTTATCTATCATGAAGAGCGCAAGTTCATTCC
CTACATGATCCTGGAGTCGTTGAAGAAGTACGGCCTGTTGGAGCGCTTCA
CCGCGTCGGTGAAGTCGTTTGCAAACAGCATCAATCTGGCCAAGGCTTCC
ATTGGCGATGCCAACATAAAGAACTACAGTCTGCGAAAGCTTTCCAAGAT
CTTGTCCACGACCAAGGAGGAAGACGCGGCTTGCTCTGCGTCCACATCTG
GATCTGGATCTGGCTTGGGATCTGGATCTAGTATGGTGTCCGATTCGGTA
TCGATATCCCCCAGGGACAGTACCGTGACCAATGGTGACGATAAGCAATC
TAGCAAGAACGCCGTTCAGGGTAAGCGGGAACTGTTTGATGGCAATGCCA
GTGTTCGTGCCAAATTGGCCTTTGATGTGGCCCTTCAGCTGAGCAACTCC
GACGGCAAGCCGGAACCAAAAAGCTCGGAGGCATTGGAGAATATGTTTAA
TGCCATACGTCCG

BS08131.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:02:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG8994-PA 1599 exu-RA 1..897 17..913 4485 100 Plus
CG8994-PB 1599 exu-RB 1..897 17..913 4485 100 Plus
CG8994-PC 1599 exu-RC 1..897 17..913 4485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:59:50
Subject Length Description Subject Range Query Range Score Percent Strand
exu-RD 2631 CG8994-RD 152..1048 17..913 4485 100 Plus
exu-RC 2621 CG8994-RC 142..1038 17..913 4485 100 Plus
exu-RB 1988 CG8994-RB 142..1038 17..913 4485 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:59:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20669302..20669897 913..318 2980 100 Minus
2R 25286936 2R 20669979..20670133 319..165 775 100 Minus
2R 25286936 2R 20670201..20670350 166..17 750 100 Minus
Blast to na_te.dros performed on 2015-02-13 07:59:49 has no hits.

BS08131.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:34:29 Download gff for BS08131.5prime
Subject Subject Range Query Range Percent Splice Strand
exu-PB 1..897 17..913 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:31:47 Download gff for BS08131.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8994-PC 1..897 17..913 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 09:52:17 Download gff for BS08131.5prime
Subject Subject Range Query Range Percent Splice Strand
exu-RB 137..1038 10..913 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:59:33 Download gff for BS08131.5prime
Subject Subject Range Query Range Percent Splice Strand
exu-RB 137..1038 10..913 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:59:33 Download gff for BS08131.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 20669302..20669895 320..913 100 <- Minus
2R 20669979..20670131 167..319 100 <- Minus
2R 20670201..20670355 10..166 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 09:52:17 Download gff for BS08131.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16556807..16557400 320..913 100 <- Minus
arm_2R 16557484..16557636 167..319 100 <- Minus
arm_2R 16557706..16557860 10..166 97   Minus

BS08131.complete Sequence

1631 bp (1631 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ636108

> BS08131.complete
GAAGTTATCAGTCGACATGGTTGCCGATAACATCGATGCCGGAGTGGCCA
TTGCCGTCGCCGATCAATCCTCGTCGCCCGTGGGCGATAAAGTTGAGCTG
CCGGCCGGTAATTATATCCTGGTGGGCGTGGATATCGACACCACTGGACG
TCGTCTAATGGATGAGATTGTCCAGCTGGCCGCTTATACACCCACCGACC
ACTTCGAGCAGTACATCATGCCATATATGAATCTGAATCCAGCTGCTCGC
CAGCGTCATCAAGTTCGTGTTATTTCGATTGGCTTTTATCGTATGCTGAA
GTCGATGCAGACTTATAAGATCATTAAATCCAAGTCTGAGATCGCTGCCC
TCAAGGACTTCCTCAACTGGCTTGAGCAACTGAAGACCAAGGCGGGTCCC
AGCTCGGACGGGATTGTGCTTATCTATCATGAAGAGCGCAAGTTCATTCC
CTACATGATCCTGGAGTCGTTGAAGAAGTACGGCCTGTTGGAGCGCTTCA
CCGCGTCGGTGAAGTCGTTTGCAAACAGCATCAATCTGGCCAAGGCTTCC
ATTGGCGATGCCAACATAAAGAACTACAGTCTGCGAAAGCTTTCCAAGAT
CTTGTCCACGACCAAGGAGGAAGACGCGGCTTGCTCTGCGTCCACATCTG
GATCTGGATCTGGCTTGGGATCTGGATCTAGTATGGTGTCCGATTCGGTA
TCGATATCCCCCAGGGACAGTACCGTGACCAATGGTGACGATAAGCAATC
TAGCAAGAACGCCGTTCAGGGTAAGCGGGAACTGTTTGATGGCAATGCCA
GTGTTCGTGCCAAATTGGCCTTTGATGTGGCCCTTCAGCTGAGCAACTCC
GACGGCAAGCCGGAACCAAAAAGCTCGGAGGCATTGGAGAATATGTTTAA
TGCCATACGTCCGTTTGCCAAGTTGGTGGTGTCCGATGTCCTGGAGCTGG
ATATCCAGATCGAAAATTTGGAGCGTCAAAACTCCTTCCGTCCGGTGTTC
CTGAACTACTTCAAGACCACTCTGTACCATCGTGTGCGTGCCGTAAAGTT
CCGCATTGTGCTGGCCGAGAATGGGTTCGATTTGAACACGCTAAGTGCCA
TCTGGGCAGAGAAAAACATCGAGGGCCTGGACATAGCCCTGCAGTCAATT
GGCCGGCTAAAGAGCAAGGACAAGGCGGAGCTGCTCGAGCTTCTGGACAG
CTATTTCGATCCCAAGAAGACCACGGTGAAGCCGGTTGTCAAGGGTAACA
GCAACAATAATAACAATTATCGTCGTCGCAATCGACGCGGCGGCCGCCAA
TCGGTGAAGGACGCTAGGCCATCCAGCTCCCCATCGGCTAGCACCGAGTT
TGGAGCAGGAGGTGACAAGTCGCGCAGCGTTTCCTCGTTGCCCGACTCTA
CTACCAAGACTCCCTCGCCAAACAAGCCGCGTATGCACCGTAAGCGCAAC
TCGCGTCAAAGCTTGGGTGCAACCCCCAATGGACTCAAGGTTGCTGCTGA
AATATCCTCCTCAGGCGTGTCTGAGCTCAACAATAGCGCTCCACCTGCCG
TAACCATAAGCCCAGTCGTGGCACAACCCTCACCGACACCGGTGGCCATC
ACGGCCTCCAACTAAAAGCTTTCTAGACCAT

BS08131.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:49:51
Subject Length Description Subject Range Query Range Score Percent Strand
exu-RD 1599 CG8994-PD 1..1599 17..1615 7995 100 Plus
exu-RC 1599 CG8994-PC 1..1599 17..1615 7995 100 Plus
exu-RB 1599 CG8994-PB 1..1599 17..1615 7995 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:49:52
Subject Length Description Subject Range Query Range Score Percent Strand
exu-RD 2631 CG8994-RD 152..1752 17..1617 8005 100 Plus
exu-RC 2621 CG8994-RC 142..1742 17..1617 8005 100 Plus
exu-RB 1988 CG8994-RB 142..1742 17..1617 8005 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:49:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20668598..20669897 1617..318 6500 100 Minus
2R 25286936 2R 20669979..20670133 319..165 775 100 Minus
2R 25286936 2R 20670201..20670350 166..17 750 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:49:49 has no hits.

BS08131.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:04:07 Download gff for BS08131.complete
Subject Subject Range Query Range Percent Splice Strand
exu-RC 1..1599 17..1615 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:42:12 Download gff for BS08131.complete
Subject Subject Range Query Range Percent Splice Strand
exu-RC 23..1637 10..1624 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:03 Download gff for BS08131.complete
Subject Subject Range Query Range Percent Splice Strand
exu-RB 142..1738 17..1613 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:04:07 Download gff for BS08131.complete
Subject Subject Range Query Range Percent Splice Strand
exu-RC 23..1637 10..1624 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:56:51 Download gff for BS08131.complete
Subject Subject Range Query Range Percent Splice Strand
exu-RB 142..1738 17..1613 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:56:51 Download gff for BS08131.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20668602..20669895 320..1613 100 <- Minus
2R 20669979..20670131 167..319 100 <- Minus
2R 20670201..20670350 17..166 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:03 Download gff for BS08131.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16556107..16557400 320..1613 100 <- Minus
arm_2R 16557484..16557636 167..319 100 <- Minus
arm_2R 16557706..16557855 17..166 100   Minus

BS08131.pep Sequence

Translation from 16 to 1614

> BS08131.pep
MVADNIDAGVAIAVADQSSSPVGDKVELPAGNYILVGVDIDTTGRRLMDE
IVQLAAYTPTDHFEQYIMPYMNLNPAARQRHQVRVISIGFYRMLKSMQTY
KIIKSKSEIAALKDFLNWLEQLKTKAGPSSDGIVLIYHEERKFIPYMILE
SLKKYGLLERFTASVKSFANSINLAKASIGDANIKNYSLRKLSKILSTTK
EEDAACSASTSGSGSGLGSGSSMVSDSVSISPRDSTVTNGDDKQSSKNAV
QGKRELFDGNASVRAKLAFDVALQLSNSDGKPEPKSSEALENMFNAIRPF
AKLVVSDVLELDIQIENLERQNSFRPVFLNYFKTTLYHRVRAVKFRIVLA
ENGFDLNTLSAIWAEKNIEGLDIALQSIGRLKSKDKAELLELLDSYFDPK
KTTVKPVVKGNSNNNNNYRRRNRRGGRQSVKDARPSSSPSASTEFGAGGD
KSRSVSSLPDSTTKTPSPNKPRMHRKRNSRQSLGATPNGLKVAAEISSSG
VSELNNSAPPAVTISPVVAQPSPTPVAITASN*

BS08131.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:48:11
Subject Length Description Subject Range Query Range Score Percent Strand
exu-PD 532 CG8994-PD 1..532 1..532 2660 100 Plus
exu-PC 532 CG8994-PC 1..532 1..532 2660 100 Plus
exu-PB 532 CG8994-PB 1..532 1..532 2660 100 Plus
exu-PA 532 CG8994-PA 1..532 1..532 2660 100 Plus