Clone BS08137 Report

Search the DGRC for BS08137

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:81
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG7777-RB
Protein status:BS08137.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS08137.3prime Sequence

837 bp (833 high quality bases) assembled on 2006-01-06

> BS08137.3prime
ATGGTCTAGAAAGCTTTCAGTAGAAGGACTCCTCGCTCCAGGCGCTTATC
AACCTGACTCTCACCTCGCGTTCATCGGCGTGCGTTCGGTACTTCTCGGA
TGCCTCGTTAACCTTTGGCACGGGCTTCGCCTCCAGGACCTGGGTGTAGA
GCAGGGCGGCAGCCACGCCCCCCAGCACAGGTCCCACCCAGTATACCCAA
TGCGACGCCCAGATGTCGGTGGCAAAGGCGGTGCCCACGGTGCGAGCGGG
ATTCATGCTGGCCCCGGTGTAGCGGATGGTGCCCAAGTGACCCAGGGTCA
CCGCCATTCCGATGGCCAAGGGCGCCGTGTAGCGGGAATCGGGCTTGTGG
GGATCACAGGCCCCAAAGACGACGAGCACCAGCAGGAGTCCCAGGAAGAA
CTCGATTCCCAGGCCCTGCAGCTCGGTGATATTGGGCGCCAGAGAGGTGT
GACCCAGGCCATTGTAATAGTCCTGATCGATGAGAATCTTAACCGCTGCA
GTTCCGGCAATTGCACCCAAGCACTGGAAAACCACATAGAAAAAGGCTCT
GATCAAGCTAATTCGTCCTGCGACCAACATTCCAGCGGTAACGGCAGGAT
TCACATGACCACCACTCAAGTGGCCCACAATCGTGATGGCCATGAAGATA
GCCAGGCCAAAAGCCAAGGCCTTGAAGGTGCCATCCTCAATTTGGGTGCA
TGCGCCGCAGGCAAAGAAATTGAGGATCAAATTGCCAAGGAATTCTCCAA
TCAAGGCCTGCCACAATCGCAGCTCCTTGGATTTGAGCTCATTGAGACCC
AGTGAGTATTCGAATTTTCCCATGTCGACTGATAACT

BS08137.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:02:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-PB 807 CG7777-RB 1..807 823..17 4035 100 Minus
CG7777-PA 795 CG7777-RA 1..759 823..65 3795 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:26:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-RB 1386 CG7777-RB 216..1022 823..17 4035 100 Minus
CG7777-RC 1479 CG7777-RC 216..975 823..64 3800 100 Minus
CG7777-RD 1388 CG7777-RD 216..974 823..65 3795 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11441066..11441538 489..17 2365 100 Minus
2R 25286936 2R 11439968..11440125 789..632 790 100 Minus
2R 25286936 2R 11440186..11440330 632..488 725 100 Minus
Blast to na_te.dros performed on 2015-02-10 23:26:26 has no hits.

BS08137.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:34:41 Download gff for BS08137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-PB 1..807 17..823 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:32:03 Download gff for BS08137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-PB 1..807 17..823 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:32:12 Download gff for BS08137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 211..1022 17..830 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:43:51 Download gff for BS08137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 211..1022 17..830 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:43:51 Download gff for BS08137.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 11439970..11440125 632..787 100 -> Minus
2R 11440187..11440330 488..631 100 -> Minus
2R 11441068..11441538 17..487 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:32:12 Download gff for BS08137.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7327475..7327630 632..787 100 -> Minus
arm_2R 7327692..7327835 488..631 100 -> Minus
arm_2R 7328573..7329043 17..487 100   Minus

BS08137.5prime Sequence

837 bp (805 high quality bases) assembled on 2006-01-06

> BS08137.5prime
GAAGTTATCAGTCGACATGGGAAAATTCGAATACTCACTGGGTCTCAATG
AGCTCAAATCCAAGGAGCTGCGATTGTGGCAGGCCTTGATTGGAGAATTC
CTTGGCAATTTGATCCTCAATTTCTTTGCCTGCGGCGCATGCACCCAAAT
TGAGGATGGCACCTTCAAGGCCTTGGCTTTTGGCCTGGCTATCTTCATGG
CCATCACGATTGTGGGCCACTTGAGTGGTGGTCATGTGAATCCTGCCGTT
ACCGCTGGAATGTTGGTCGCAGGACGAATTAGCTTGATCAGAGCCTTTTT
CTATGTGGTTTTCCAGTGCTTGGGTGCAATTGCCGGAACTGCAGCGGTTA
AGATTCTCATCGATCAGGACTATTACAATGGCCTGGGTCACACCTCTCTG
GCGCCCAATATCACCGAGCTGCAGGGCCTGGGAATCGAGTTCTTCCTGGG
ACTCCTGCTGGTGCTCGTCGTCTTTGGGGCCTGTGATCCCCACAAGCCCG
ATTCCCGCTACACGGCGCCCTTGGCCATCGGAATGGCGGTGACCCTGGGT
CACTTGGGCACCATCCGCTACACCGGGGCCAGCATGAATCCCGCTCGCAC
CGTGGGCACCGCCTTTGCCACCGACATCTGGGCGTCGCATTGGGTATACT
GGGTGGGACCTGTGCTGGGGGGCGTGGCTGCCGCCCTGCTCTACACCCAG
GTCCTGGAGGCGAAGCCCGTGCCAAAGGTTAACGAGGCATCCGAGAAGTA
CCGAACGCACGCCGATGAACGCGAGGTGAGAGTCAGGTTGATAAGCGCCT
GGAGCGAGGAGTCCTTCTACTGAAAGCTTTCTAGACC

BS08137.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:02:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-PB 807 CG7777-RB 1..807 17..823 4035 100 Plus
CG7777-PA 795 CG7777-RA 1..759 17..775 3795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:48:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-RB 1386 CG7777-RB 216..1022 17..823 4035 100 Plus
CG7777-RC 1479 CG7777-RC 216..975 17..776 3800 100 Plus
CG7777-RD 1388 CG7777-RD 216..974 17..775 3795 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:48:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11441066..11441538 351..823 2365 100 Plus
2R 25286936 2R 11439968..11440125 51..208 790 100 Plus
2R 25286936 2R 11440186..11440330 208..352 725 100 Plus
Blast to na_te.dros performed on 2015-02-11 12:48:47 has no hits.

BS08137.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:34:42 Download gff for BS08137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-PB 1..807 17..823 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:32:04 Download gff for BS08137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-PB 1..807 17..823 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:26:56 Download gff for BS08137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 211..1022 10..823 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:48:18 Download gff for BS08137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 211..1022 10..823 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 16:48:18 Download gff for BS08137.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11439970..11440125 53..208 100 -> Plus
2R 11440187..11440330 209..352 100 -> Plus
2R 11441068..11441538 353..823 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:26:56 Download gff for BS08137.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7327475..7327630 53..208 100 -> Plus
arm_2R 7327692..7327835 209..352 100 -> Plus
arm_2R 7328573..7329043 353..823 100   Plus

BS08137.complete Sequence

839 bp (839 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ636110

> BS08137.complete
GAAGTTATCAGTCGACATGGGAAAATTCGAATACTCACTGGGTCTCAATG
AGCTCAAATCCAAGGAGCTGCGATTGTGGCAGGCCTTGATTGGAGAATTC
CTTGGCAATTTGATCCTCAATTTCTTTGCCTGCGGCGCATGCACCCAAAT
TGAGGATGGCACCTTCAAGGCCTTGGCTTTTGGCCTGGCTATCTTCATGG
CCATCACGATTGTGGGCCACTTGAGTGGTGGTCATGTGAATCCTGCCGTT
ACCGCTGGAATGTTGGTCGCAGGACGAATTAGCTTGATCAGAGCCTTTTT
CTATGTGGTTTTCCAGTGCTTGGGTGCAATTGCCGGAACTGCAGCGGTTA
AGATTCTCATCGATCAGGACTATTACAATGGCCTGGGTCACACCTCTCTG
GCGCCCAATATCACCGAGCTGCAGGGCCTGGGAATCGAGTTCTTCCTGGG
ACTCCTGCTGGTGCTCGTCGTCTTTGGGGCCTGTGATCCCCACAAGCCCG
ATTCCCGCTACACGGCGCCCTTGGCCATCGGAATGGCGGTGACCCTGGGT
CACTTGGGCACCATCCGCTACACCGGGGCCAGCATGAATCCCGCTCGCAC
CGTGGGCACCGCCTTTGCCACCGACATCTGGGCGTCGCATTGGGTATACT
GGGTGGGACCTGTGCTGGGGGGCGTGGCTGCCGCCCTGCTCTACACCCAG
GTCCTGGAGGCGAAGCCCGTGCCAAAGGTTAACGAGGCATCCGAGAAGTA
CCGAACGCACGCCGATGAACGCGAGGTGAGAGTCAGGTTGATAAGCGCCT
GGAGCGAGGAGTCCTTCTACTGAAAGCTTTCTAGACCAT

BS08137.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:10:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-RB 807 CG7777-PB 1..807 17..823 4035 100 Plus
CG7777-RC 813 CG7777-PC 1..760 17..776 3800 100 Plus
CG7777-RD 780 CG7777-PD 1..759 17..775 3795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:10:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-RB 1386 CG7777-RB 216..1022 17..823 4035 100 Plus
CG7777-RC 1479 CG7777-RC 216..975 17..776 3800 100 Plus
CG7777-RD 1388 CG7777-RD 216..974 17..775 3795 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:10:29
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11441066..11441538 351..823 2365 100 Plus
2R 25286936 2R 11439968..11440125 51..208 790 100 Plus
2R 25286936 2R 11440186..11440330 208..352 725 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:10:29 has no hits.

BS08137.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:43:23 Download gff for BS08137.complete
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 1..807 17..823 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:30:21 Download gff for BS08137.complete
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 208..1019 10..823 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:18 Download gff for BS08137.complete
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 216..1021 17..822 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:43:23 Download gff for BS08137.complete
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 208..1019 10..823 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:27 Download gff for BS08137.complete
Subject Subject Range Query Range Percent Splice Strand
CG7777-RB 216..1021 17..822 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:27 Download gff for BS08137.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11439833..11439868 17..52 100 -> Plus
2R 11439970..11440125 53..208 100 -> Plus
2R 11440187..11440330 209..352 100 -> Plus
2R 11441068..11441537 353..822 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:18 Download gff for BS08137.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7327338..7327373 17..52 100 -> Plus
arm_2R 7327475..7327630 53..208 100 -> Plus
arm_2R 7327692..7327835 209..352 100 -> Plus
arm_2R 7328573..7329042 353..822 100   Plus

BS08137.pep Sequence

Translation from 16 to 822

> BS08137.pep
MGKFEYSLGLNELKSKELRLWQALIGEFLGNLILNFFACGACTQIEDGTF
KALAFGLAIFMAITIVGHLSGGHVNPAVTAGMLVAGRISLIRAFFYVVFQ
CLGAIAGTAAVKILIDQDYYNGLGHTSLAPNITELQGLGIEFFLGLLLVL
VVFGACDPHKPDSRYTAPLAIGMAVTLGHLGTIRYTGASMNPARTVGTAF
ATDIWASHWVYWVGPVLGGVAAALLYTQVLEAKPVPKVNEASEKYRTHAD
EREVRVRLISAWSEESFY*

BS08137.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG7777-PB 268 CG7777-PB 1..268 1..268 1388 100 Plus
CG7777-PA 264 CG7777-PA 1..255 1..255 1318 99.6 Plus
CG7777-PD 259 CG7777-PD 1..256 1..256 1314 98.8 Plus
CG7777-PC 270 CG7777-PC 1..253 1..253 1312 100 Plus
Drip-PE 239 CG9023-PE 1..228 1..233 473 40.4 Plus