Clone Sequence Records
BS08156.5prime Sequence
468 bp (467 high quality bases) assembled on 2006-01-06
> BS08156.5prime
GAAGTTATCAGTCGACATGGCGAATACATCAAGTACCGGCGTTGTGGTGC
CACGGAATTTCCGCTTACTGGAGGAGCTGGATCAGGGCCAGAAGGGCGTG
GGCGATGGCACCATATCGTGGGGCCTGGAGAACGACGACGACATGACGCT
CACCTACTGGATCGGCATGATCATCGGTCCGCCTAGAACACCATTCGAGA
ATCGAATGTATTCACTAAAGATCGAGTGCGGCGAACGCTATCCGGATGAG
CCACCAACGCTCCGGTTTATAACTAAAGTAAACATTAACTGCATTAATCA
GAACAATGGCGTGGTTGATCATAGATCAGTTCAGATGTTGGCCAGATGGA
GTCGCGAGTACAATATAAAAACGATGCTGCAGGAAATCCGTAGGATTATG
ACCATGAAAGAGAACCTGAAGCTGGCACAGCCGCCAGAAGGTAGCTGTTT
TTAGAAGCTTTCTAGACC
BS08156.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:03:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10640-PA | 438 | Uev1A-RA | 1..438 | 17..454 | 2190 | 100 | Plus |
CG10640-PB | 312 | Uev1A-RB | 1..312 | 143..454 | 1560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:21:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Uev1A-RC | 1189 | CG10640-RC | 27..464 | 17..454 | 2190 | 100 | Plus |
Uev1A-RA | 1196 | CG10640-RA | 70..507 | 17..454 | 2190 | 100 | Plus |
Uev1A-RB | 1609 | CG10640-RB | 207..618 | 43..454 | 2060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:21:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5364943..5365086 | 187..44 | 720 | 100 | Minus |
3L | 28110227 | 3L | 5363875..5364016 | 454..313 | 710 | 100 | Minus |
3L | 28110227 | 3L | 5364082..5364209 | 315..188 | 640 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:21:10 has no hits.
BS08156.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:35:22 Download gff for
BS08156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-PA | 1..438 | 17..454 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:32:56 Download gff for
BS08156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10640-PA | 1..438 | 17..454 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:29:14 Download gff for
BS08156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 66..507 | 9..454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:51:19 Download gff for
BS08156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 66..507 | 9..454 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:51:19 Download gff for
BS08156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5363875..5364015 | 314..454 | 100 | <- | Minus |
3L | 5364084..5364209 | 188..313 | 100 | <- | Minus |
3L | 5364943..5365085 | 45..187 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:29:14 Download gff for
BS08156.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5356975..5357115 | 314..454 | 100 | <- | Minus |
arm_3L | 5357184..5357309 | 188..313 | 100 | <- | Minus |
arm_3L | 5358043..5358185 | 45..187 | 100 | <- | Minus |
BS08156.3prime Sequence
468 bp (467 high quality bases) assembled on 2006-01-06
> BS08156.3prime
ATGGTCTAGAAAGCTTCTAAAAACAGCTACCTTCTGGCGGCTGTGCCAGC
TTCAGGTTCTCTTTCATGGTCATAATCCTACGGATTTCCTGCAGCATCGT
TTTTATATTGTACTCGCGACTCCATCTGGCCAACATCTGAACTGATCTAT
GATCAACCACGCCATTGTTCTGATTAATGCAGTTAATGTTTACTTTAGTT
ATAAACCGGAGCGTTGGTGGCTCATCCGGATAGCGTTCGCCGCACTCGAT
CTTTAGTGAATACATTCGATTCTCGAATGGTGTTCTAGGCGGACCGATGA
TCATGCCGATCCAGTAGGTGAGCGTCATGTCGTCGTCGTTCTCCAGGCCC
CACGATATGGTGCCATCGCCCACGCCCTTCTGGCCCTGATCCAGCTCCTC
CAGTAAGCGGAAATTCCGTGGCACCACAACGCCGGTACTTGATGTATTCG
CCATGTCGACTGATAACT
BS08156.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:03:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10640-PA | 438 | Uev1A-RA | 1..438 | 454..17 | 2190 | 100 | Minus |
CG10640-PB | 312 | Uev1A-RB | 1..312 | 328..17 | 1560 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:05:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Uev1A-RC | 1189 | CG10640-RC | 27..464 | 454..17 | 2190 | 100 | Minus |
Uev1A-RA | 1196 | CG10640-RA | 70..507 | 454..17 | 2190 | 100 | Minus |
Uev1A-RB | 1609 | CG10640-RB | 207..618 | 428..17 | 2060 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:05:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5364943..5365086 | 284..427 | 720 | 100 | Plus |
3L | 28110227 | 3L | 5363875..5364016 | 17..158 | 710 | 100 | Plus |
3L | 28110227 | 3L | 5364082..5364209 | 156..283 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:05:41 has no hits.
BS08156.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:35:20 Download gff for
BS08156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-PA | 1..438 | 17..454 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:32:54 Download gff for
BS08156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10640-PA | 1..438 | 17..454 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 21:27:56 Download gff for
BS08156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 66..507 | 17..462 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:49:06 Download gff for
BS08156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 66..507 | 17..462 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:49:06 Download gff for
BS08156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5364943..5365085 | 284..426 | 100 | <- | Plus |
3L | 5363875..5364015 | 17..157 | 100 | <- | Plus |
3L | 5364084..5364209 | 158..283 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 21:27:56 Download gff for
BS08156.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5356975..5357115 | 17..157 | 100 | <- | Plus |
arm_3L | 5357184..5357309 | 158..283 | 100 | <- | Plus |
arm_3L | 5358043..5358185 | 284..426 | 100 | <- | Plus |
BS08156.complete Sequence
470 bp (470 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ636115
> BS08156.complete
GAAGTTATCAGTCGACATGGCGAATACATCAAGTACCGGCGTTGTGGTGC
CACGGAATTTCCGCTTACTGGAGGAGCTGGATCAGGGCCAGAAGGGCGTG
GGCGATGGCACCATATCGTGGGGCCTGGAGAACGACGACGACATGACGCT
CACCTACTGGATCGGCATGATCATCGGTCCGCCTAGAACACCATTCGAGA
ATCGAATGTATTCACTAAAGATCGAGTGCGGCGAACGCTATCCGGATGAG
CCACCAACGCTCCGGTTTATAACTAAAGTAAACATTAACTGCATTAATCA
GAACAATGGCGTGGTTGATCATAGATCAGTTCAGATGTTGGCCAGATGGA
GTCGCGAGTACAATATAAAAACGATGCTGCAGGAAATCCGTAGGATTATG
ACCATGAAAGAGAACCTGAAGCTGGCACAGCCGCCAGAAGGTAGCTGTTT
TTAGAAGCTTTCTAGACCAT
BS08156.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:16:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Uev1A-RC | 438 | CG10640-PC | 1..438 | 17..454 | 2190 | 100 | Plus |
Uev1A-RA | 438 | CG10640-PA | 1..438 | 17..454 | 2190 | 100 | Plus |
Uev1A-RB | 312 | CG10640-PB | 1..312 | 143..454 | 1560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:16:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Uev1A-RC | 1189 | CG10640-RC | 27..464 | 17..454 | 2190 | 100 | Plus |
Uev1A-RA | 1196 | CG10640-RA | 70..507 | 17..454 | 2190 | 100 | Plus |
Uev1A-RB | 1609 | CG10640-RB | 207..618 | 43..454 | 2060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:16:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5364943..5365086 | 187..44 | 720 | 100 | Minus |
3L | 28110227 | 3L | 5363875..5364016 | 454..313 | 710 | 100 | Minus |
3L | 28110227 | 3L | 5364082..5364209 | 315..188 | 640 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:16:45 has no hits.
BS08156.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:04:13 Download gff for
BS08156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 1..438 | 17..454 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:42:18 Download gff for
BS08156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 66..507 | 9..454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:05:59 Download gff for
BS08156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 70..507 | 17..454 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:04:13 Download gff for
BS08156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 66..507 | 9..454 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:32 Download gff for
BS08156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uev1A-RA | 70..507 | 17..454 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:32 Download gff for
BS08156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5363875..5364015 | 314..454 | 100 | <- | Minus |
3L | 5364084..5364209 | 188..313 | 100 | <- | Minus |
3L | 5364943..5365085 | 45..187 | 100 | <- | Minus |
3L | 5366129..5366156 | 17..44 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:05:59 Download gff for
BS08156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5356975..5357115 | 314..454 | 100 | <- | Minus |
arm_3L | 5357184..5357309 | 188..313 | 100 | <- | Minus |
arm_3L | 5358043..5358185 | 45..187 | 100 | <- | Minus |
arm_3L | 5359229..5359256 | 17..44 | 100 | | Minus |
BS08156.pep Sequence
Translation from 16 to 453
> BS08156.pep
MANTSSTGVVVPRNFRLLEELDQGQKGVGDGTISWGLENDDDMTLTYWIG
MIIGPPRTPFENRMYSLKIECGERYPDEPPTLRFITKVNINCINQNNGVV
DHRSVQMLARWSREYNIKTMLQEIRRIMTMKENLKLAQPPEGSCF*
BS08156.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Uev1A-PC | 145 | CG10640-PC | 1..145 | 1..145 | 777 | 100 | Plus |
Uev1A-PA | 145 | CG10640-PA | 1..145 | 1..145 | 777 | 100 | Plus |
Uev1A-PB | 103 | CG10640-PB | 1..103 | 43..145 | 557 | 100 | Plus |
Ubc6-PC | 151 | CG2013-PC | 30..114 | 42..129 | 140 | 33.7 | Plus |
Ubc6-PA | 151 | CG2013-PA | 30..114 | 42..129 | 140 | 33.7 | Plus |