Clone BS08157 Report

Search the DGRC for BS08157

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:81
Well:57
Vector:pDNR-Dual
Associated Gene/Transcriptfwe-RA
Protein status:BS08157.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS08157.3prime Sequence

615 bp (614 high quality bases) assembled on 2006-01-06

> BS08157.3prime
ATGGTCTAGAAAGCTTTCACACATTGCTGTCCGTGCCCACGGCACCGGTG
AAGGAGAAGGGCTGGGCGTTGTTCACAATCCCCGCTCGATCGTTGGTTTG
GGCAGGTGTGTTTCCTCCGAAGGTTTGCTGAGCAGCTGCCCGCATGTCCT
CGGCGGATGCTTTCTTGCCTAACGCCATCATGCCGTAAACCACGCCAGTG
CCAAAGATCAGCCCACTGCCGAATAAGCTGGCCAGTCCAAAGCACAGAAT
AATGGGCGGAATGGCCATGGCAATGTAGAGCCCGGCACGGAAGTACAAGG
GCTTAGATTCCACCTTTTCCGCGATCTCGTTCACCTGCCCAAAGCAGACG
AAACAGCAGGGAGCCTCCAAGAGCATCACCACAAATCCTGCCACCATTTG
AAGGATGCCAGCCACCAGGCAGGATACGCTGAGCGTGATGATGGAGAACA
CATTCCACAGGCCGAAAAGAATGGCAAAGAAGGCGGCCACAATGCCCAGC
AATCGACTTCCATATTTGAGATACCACGGCTGCTCCGGTCCAATTGGATC
TTGTTGATTCGGCCGTGCCAGCAGACCCGTTATCTTTTCCGCAAACGACA
TGTCGACTGATAACT

BS08157.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG6151-PA 585 CG6151-RA 1..585 601..17 2925 100 Minus
CG6151-PB 579 CG6151-RB 1..443 601..159 2215 100 Minus
CG6151-PC 474 CG6151-RC 1..440 601..162 2200 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 15:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
fwe-RA 1342 CG6151-RA 134..719 602..17 2930 100 Minus
fwe-RB 3020 CG6151-RB 134..593 602..143 2225 99.1 Minus
fwe-RC 2364 CG6151-RC 134..574 602..162 2205 100 Minus
fwe-RB 3020 CG6151-RB 2253..2397 161..17 725 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 15:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15813419..15813626 270..477 1040 100 Plus
3L 28110227 3L 15810704..15810848 17..161 725 100 Plus
3L 28110227 3L 15815936..15816057 478..599 610 100 Plus
3L 28110227 3L 15813246..15813353 162..269 540 100 Plus
Blast to na_te.dros performed on 2015-01-31 15:41:47 has no hits.

BS08157.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:35:23 Download gff for BS08157.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6151-PA 1..585 17..601 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:32:57 Download gff for BS08157.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6151-PA 1..585 17..601 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:16:45 Download gff for BS08157.3prime
Subject Subject Range Query Range Percent Splice Strand
fwe-RA 125..719 17..611 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:37:06 Download gff for BS08157.3prime
Subject Subject Range Query Range Percent Splice Strand
fwe-RA 125..719 17..611 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:37:06 Download gff for BS08157.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 15810704..15810848 17..161 100 <- Plus
3L 15813246..15813353 162..269 100 <- Plus
3L 15813419..15813626 270..477 100 <- Plus
3L 15815936..15816059 478..602 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:16:45 Download gff for BS08157.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15803804..15803948 17..161 100 <- Plus
arm_3L 15806346..15806453 162..269 100 <- Plus
arm_3L 15806519..15806726 270..477 100 <- Plus
arm_3L 15809036..15809159 478..602 99   Plus

BS08157.5prime Sequence

615 bp (614 high quality bases) assembled on 2006-01-06

> BS08157.5prime
GAAGTTATCAGTCGACATGTCGTTTGCGGAAAAGATAACGGGTCTGCTGG
CACGGCCGAATCAACAAGATCCAATTGGACCGGAGCAGCCGTGGTATCTC
AAATATGGAAGTCGATTGCTGGGCATTGTGGCCGCCTTCTTTGCCATTCT
TTTCGGCCTGTGGAATGTGTTCTCCATCATCACGCTCAGCGTATCCTGCC
TGGTGGCTGGCATCCTTCAAATGGTGGCAGGATTTGTGGTGATGCTCTTG
GAGGCTCCCTGCTGTTTCGTCTGCTTTGGGCAGGTGAACGAGATCGCGGA
AAAGGTGGAATCTAAGCCCTTGTACTTCCGTGCCGGGCTCTACATTGCCA
TGGCCATTCCGCCCATTATTCTGTGCTTTGGACTGGCCAGCTTATTCGGC
AGTGGGCTGATCTTTGGCACTGGCGTGGTTTACGGCATGATGGCGTTAGG
CAAGAAAGCATCCGCCGAGGACATGCGGGCAGCTGCTCAGCAAACCTTCG
GAGGAAACACACCTGCCCAAACCAACGATCGAGCGGGGATTGTGAACAAC
GCCCAGCCCTTCTCCTTCACCGGTGCCGTGGGCACGGACAGCAATGTGTG
AAAGCTTTCTAGACC

BS08157.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG6151-PA 585 CG6151-RA 1..585 17..601 2925 100 Plus
CG6151-PB 579 CG6151-RB 1..443 17..459 2215 100 Plus
CG6151-PC 474 CG6151-RC 1..440 17..456 2200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:53:09
Subject Length Description Subject Range Query Range Score Percent Strand
fwe-RA 1342 CG6151-RA 134..719 16..601 2930 100 Plus
fwe-RB 3020 CG6151-RB 134..593 16..475 2225 99.1 Plus
fwe-RC 2364 CG6151-RC 134..574 16..456 2205 100 Plus
fwe-RB 3020 CG6151-RB 2253..2397 457..601 725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:53:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15813419..15813626 348..141 1040 100 Minus
3L 28110227 3L 15810704..15810848 601..457 725 100 Minus
3L 28110227 3L 15815936..15816057 140..19 610 100 Minus
3L 28110227 3L 15813246..15813353 456..349 540 100 Minus
Blast to na_te.dros performed on 2015-02-11 17:53:05 has no hits.

BS08157.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:35:24 Download gff for BS08157.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6151-PA 1..585 17..601 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:32:59 Download gff for BS08157.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6151-PA 1..585 17..601 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:22:13 Download gff for BS08157.5prime
Subject Subject Range Query Range Percent Splice Strand
fwe-RA 125..719 7..601 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:33:39 Download gff for BS08157.5prime
Subject Subject Range Query Range Percent Splice Strand
fwe-RA 125..719 7..601 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:33:39 Download gff for BS08157.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15810704..15810848 457..601 100 <- Minus
3L 15813246..15813353 349..456 100 <- Minus
3L 15813419..15813626 141..348 100 <- Minus
3L 15815936..15816059 16..140 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:22:13 Download gff for BS08157.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15803804..15803948 457..601 100 <- Minus
arm_3L 15806346..15806453 349..456 100 <- Minus
arm_3L 15806519..15806726 141..348 100 <- Minus
arm_3L 15809036..15809159 16..140 99   Minus

BS08157.complete Sequence

617 bp (617 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ636116

> BS08157.complete
GAAGTTATCAGTCGACATGTCGTTTGCGGAAAAGATAACGGGTCTGCTGG
CACGGCCGAATCAACAAGATCCAATTGGACCGGAGCAGCCGTGGTATCTC
AAATATGGAAGTCGATTGCTGGGCATTGTGGCCGCCTTCTTTGCCATTCT
TTTCGGCCTGTGGAATGTGTTCTCCATCATCACGCTCAGCGTATCCTGCC
TGGTGGCTGGCATCCTTCAAATGGTGGCAGGATTTGTGGTGATGCTCTTG
GAGGCTCCCTGCTGTTTCGTCTGCTTTGGGCAGGTGAACGAGATCGCGGA
AAAGGTGGAATCTAAGCCCTTGTACTTCCGTGCCGGGCTCTACATTGCCA
TGGCCATTCCGCCCATTATTCTGTGCTTTGGACTGGCCAGCTTATTCGGC
AGTGGGCTGATCTTTGGCACTGGCGTGGTTTACGGCATGATGGCGTTAGG
CAAGAAAGCATCCGCCGAGGACATGCGGGCAGCTGCTCAGCAAACCTTCG
GAGGAAACACACCTGCCCAAACCAACGATCGAGCGGGGATTGTGAACAAC
GCCCAGCCCTTCTCCTTCACCGGTGCCGTGGGCACGGACAGCAATGTGTG
AAAGCTTTCTAGACCAT

BS08157.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:08:18
Subject Length Description Subject Range Query Range Score Percent Strand
fwe-RA 585 CG6151-PA 1..585 17..601 2925 100 Plus
fwe-RB 579 CG6151-PB 1..459 17..475 2220 98.9 Plus
fwe-RC 474 CG6151-PC 1..440 17..456 2200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:08:19
Subject Length Description Subject Range Query Range Score Percent Strand
fwe-RA 1342 CG6151-RA 134..719 16..601 2930 100 Plus
fwe-RB 3020 CG6151-RB 134..593 16..475 2225 98.9 Plus
fwe-RC 2364 CG6151-RC 134..574 16..456 2205 100 Plus
fwe-RB 3020 CG6151-RB 2253..2397 457..601 725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:08:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15813419..15813626 348..141 1040 100 Minus
3L 28110227 3L 15810704..15810848 601..457 725 100 Minus
3L 28110227 3L 15815936..15816057 140..19 610 100 Minus
3L 28110227 3L 15813246..15813353 456..349 540 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:08:17 has no hits.

BS08157.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:04:14 Download gff for BS08157.complete
Subject Subject Range Query Range Percent Splice Strand
CG6151-RA 1..585 17..601 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:42:20 Download gff for BS08157.complete
Subject Subject Range Query Range Percent Splice Strand
CG6151-RA 124..718 7..601 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:06:28 Download gff for BS08157.complete
Subject Subject Range Query Range Percent Splice Strand
fwe-RA 135..718 17..600 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:04:14 Download gff for BS08157.complete
Subject Subject Range Query Range Percent Splice Strand
CG6151-RA 124..718 7..601 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:57 Download gff for BS08157.complete
Subject Subject Range Query Range Percent Splice Strand
fwe-RA 135..718 17..600 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:57 Download gff for BS08157.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15810705..15810848 457..600 100 <- Minus
3L 15813246..15813353 349..456 100 <- Minus
3L 15813419..15813626 141..348 100 <- Minus
3L 15815936..15816058 17..140 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:06:28 Download gff for BS08157.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15803805..15803948 457..600 100 <- Minus
arm_3L 15806346..15806453 349..456 100 <- Minus
arm_3L 15806519..15806726 141..348 100 <- Minus
arm_3L 15809036..15809158 17..140 99   Minus

BS08157.pep Sequence

Translation from 16 to 600

> BS08157.pep
MSFAEKITGLLARPNQQDPIGPEQPWYLKYGSRLLGIVAAFFAILFGLWN
VFSIITLSVSCLVAGILQMVAGFVVMLLEAPCCFVCFGQVNEIAEKVESK
PLYFRAGLYIAMAIPPIILCFGLASLFGSGLIFGTGVVYGMMALGKKASA
EDMRAAAQQTFGGNTPAQTNDRAGIVNNAQPFSFTGAVGTDSNV*

BS08157.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:47:54
Subject Length Description Subject Range Query Range Score Percent Strand
fwe-PA 194 CG6151-PA 1..194 1..194 998 100 Plus
fwe-PB 192 CG6151-PB 1..157 1..157 793 98.7 Plus
fwe-PC 157 CG6151-PC 1..146 1..146 754 100 Plus