Clone Sequence Records
BS08166.3prime Sequence
863 bp (855 high quality bases) assembled on 2006-01-06
> BS08166.3prime
ATGGTCTAGAAAGCTTCTATTTAACGCTCATTATATTGAATACTGGACCG
ATGCGCATGAACACACGCCTAAGGACACTTCTCAGTTCGGGCTTGAGGTC
GAAGCACATCATCTCGCACAGCAGGCTGTAGTAGTTGGAAACGTGGGTGG
CGAACCTGGCATCGGACATCTTGAGCAGGCGCGTCAGGATGAGCAGCAGC
AGCGATGTCCACGCATCTCGGTGTGCCTCGCTCTGCAAACTCAAATAGTA
GCCCAGTGCCTCCTTGCAGACCTGCACCAGTTCCTGCTCGATGCCGGGCC
AATCGCTGCGTCTATTCTCGTCGCCGTACATCTTGAAGAAAATGCGCAGG
ACGCAGGCCAGCGACGAGGTCTCCTGCTTCAGCAGATTCGGTTTAACAGA
TCCCTTGAATCCCGCCCGCCAAAGCAGGCTGCGTTGGTCGTGATCGGCGT
TGAAGCGCTTGGCAAAACGGTGCGACTGCATCAGACAGTCGGCCAGGGTG
AGCAGCTGGCGGGTTCTCAGATAGCCGTACATTCCCTGCTCCTCCCGCTG
GCACTCCAGCAGCTGCGACTGCGAACCGCTCCTGCCGCCTGTTAAGTCTG
CCGCCGCCTGGGCCAGCGTTTCGGCATCCTCCTTGCGCGACGTGGCCGGG
AAAAAGACAATGTTATCCATGGTCTGTATCAGTTCCAGCTGGACTACGCA
GCGGATATGCAGCGCCTCANAGTGGTTGTGCTCCTGGGGTATATTGTTAC
TGGAATGTGCTTTCGGCCGCCAACTGAGGAGATCCTGCGGCAAAGTGGCG
TTGAAGATGTCCAGGATGCACTGGCACGTCTTGTCCCAGGTGGACTCGTT
GAACTTGAATCAT
BS08166.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:03:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7578-PA | 4962 | CG7578-RA | 4118..4962 | 861..17 | 4206 | 99.8 | Minus |
| CG7578-PB | 4845 | CG7578-RB | 4118..4707 | 861..272 | 2931 | 99.8 | Minus |
| CG7578-PB | 4845 | CG7578-RB | 4707..4845 | 155..17 | 695 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sec71-RA | 5818 | CG7578-RA | 4445..5289 | 861..17 | 4214 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:42:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13798232..13798938 | 861..155 | 3524 | 99.9 | Minus |
| 2L | 23513712 | 2L | 13799007..13799145 | 155..17 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:42:09 has no hits.
BS08166.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:35:42 Download gff for
BS08166.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7578-PA | 4115..4962 | 17..863 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:33:23 Download gff for
BS08166.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7578-PA | 4115..4962 | 17..863 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 07:55:23 Download gff for
BS08166.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sec71-RA | 4442..5289 | 17..863 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:58:00 Download gff for
BS08166.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sec71-RA | 4442..5289 | 17..863 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:58:00 Download gff for
BS08166.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13798229..13798938 | 155..863 | 99 | -> | Minus |
| 2L | 13799008..13799145 | 17..154 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 07:55:23 Download gff for
BS08166.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13798229..13798938 | 155..863 | 99 | -> | Minus |
| arm_2L | 13799008..13799145 | 17..154 | 100 | | Minus |
BS08166.complete Sequence
4994 bp assembled on 2008-08-14
GenBank Submission: FJ636120
> BS08166.complete
GAAGTTATCAGTCGACATGCACAACAACTCCACAAAAACCAAGGAAATGT
TCATCGTGCGTGCTCTAGAAAAGATCCTTGCCGATAAGGACATACGGCGC
TCCCATCACTCGCAGCTGAAGAAGTCCTGCGATTCGGCGCTGGAGCAGAT
TAAGGCGGAGCTAATCAGTGCCGGCCAGATCGCAGAGGGCAATGAGCTGC
CCTGTGCCGCACTCCCGCTGCCCAAGAATGATGCAGCGAGCATCATAAAT
GCGGAGACCTACTTTCTCCCCTTCGAGCTTGCCTGCAAGAGCCGCTCGCC
CAGGATCGTGGTCACCGCACTGGACTGCCTGCAGAAACTCATTGCCTATG
GCCATTTGACAGGATCCATTCAGGACTCGGCCAATCCGGGTCACCTGCTC
ATCGACCGTATCGTTGTGACCATATATGGCTGCTTCAGTGGTCCCCAGAC
GGACGAGGCCGTCCAACTGCAGATAATAAAGGCTCTGCTCACGGTGGTCA
CCTCGCAGCATGTGGAAATCCATGAATTCACACTGCTGCAAGCTGTGCGC
ACCTGCTACGACATCTATTTGTCCAGCAAGAACCTGGTCAATCAGACCAC
AGCACGCGCTACGCTCACCCAAATGTTGAACGTGATATTTGCCCGCATGG
AGAATCAAGTGTACGAGCTACCACCTCCCAATTCCAATCCCACCAACGGC
AGCATCCACTCGGAGGATTGCAATGGCTCGGGAGAGGAGTCGCTGCGGGA
TTCCGACGAAGTAATTGCCTCGGAACTGCTGGCGGAGATCATATCAGCTG
CCTACAATGAGGCGATGAAGGATCAGGAATCGGTCGGTGAGCCAGAGCCA
ACACTTAATGGAAACGACTACTCCTCGCACTCGGATCACGACAGTGTGGA
GCTGCACAGCGAAAACGATGCGGTTGTAACGGCTAAGTTTACGCACATCC
TGCAGAAAGATGCTTTTCTCGTGTTCCGGGCACTGTGCAAGCTATCGATG
AAGCCTTTGCCGGATGGACATCCAGATCCGAAATCGCACGAGCTGCGTTC
CAAGGTGCTGTCATTGCATCTGCTGCTGCTCATCCTCCAGAATGCCGGGC
CCGTCTTCCGCTCCAACGAGATGTTCATCATGGCCATTAAGCAGTACCTG
TGCGTGGCCTTGTCAAACAACGGAGTCAGTCTGGTGCCGGAGGTCTTCGA
GCTGTCGCTTTCAATCTTCGTTGCCCTACTCTCGAACTTCAAGGTGCATC
TTAAGCGGCAGATAGAGGTGTTCTTCAAGGAAATCTTCCTAAACATTCTT
GAGGCGAACTCAAGCAGCTTCGAGCACAAATGGATGGTAATCCAAGCGCT
GACACGTATTTGTGCTGACGCCCAGTCCGTGGTGGATATCTATGTTAATT
ACGATTGCGACTTTTCGGCTGCAAACCTTTTTGAGAGACTGGTCAACGAT
CTTTCGAAAATTGCCCAGGGTCGTCAGGCTCTCGAACTGGGCGCCAATCC
GATGCAAGAGAAATCGATGCGCATTCGCGGCCTGGAGTGTCTTGTCTCCA
TTCTTAAGTGCATGGTAGAGTGGAGTAAGGACTTGTATGTTAATCCAAAC
ATGCCGGTTCCACCTATGCAAGTCCAATCGCCGACAAGCACTGAGCAGGA
TCAGGCGGACACAACTATCCAAACGATGCACAGTGGTTCCAGTCATAGTT
TGAACTCCAATCAGGAGCAACTACAGGATCTTCCCGAGGCATTGGAGGAG
CGCAAGATGCGCAAGGAAGTGATGGAAACAGGCATTGAGTTATTCAATCG
TAAGCCTCAGAAAGGAGTGCAATTCCTGCAGGAGAAGCAGTTGCTGGGTG
CCACATGCGGGGACATTGCGCGCTGGCTGCACGAGGACGAACGACTGGAC
AAGACAGTGATCGGAAACTACATTGGCGAGAATGACGACCACTCCAAGGA
AGTGATGTGCGCTTACATCGATGCCTTTGACTTTCGCCAAATGGAGGTGG
TGGCCGCCTTGAGATTTCTTCTCGAGGGGTTCCGCCTGCCAGGAGAAGCA
CAAAAAATCGATCGGCTGATGGAGAAGTTCGCCAGTAGATACTGCGAATG
CAATCCGAAGAACCAGCTATTCCAAAGCGCAGACACCGTCTACGTGCTGG
CATTCAGCATCATTATGCTGACCACGGATCTTCATTCGCCGCAGGTCAAG
CACAAGATGACCAAGGAGCAGTACATTAAAATGAACCGCGGCATCAGCGA
CAGCAAGTCCGATTTGCCCGAGGAGTACTTGTCGTCCATCTACGACGAGA
TTTCTGAACACGAAATTAAGATGAAGAACAACTCCGGTATGCTTCAACAG
GCGAAACCCACTGGAAAGCAGGCCTTCATAACGGAGAAACGCAGAAAGCT
GTTGTGGAACATGGAGATGGAGGTCATCTCGCTGACGGCCACCAATCTAA
TGCAGTCAGTTTCGCACGTCAAGTCACCCTTCACCTCAGCGAAACACTTG
GAGCATGTCCGGCCCATGTTCAAAATGGCTTGGACACCATTTCTGGCCGC
TTTCTCTGTGGGTCTCCAGGACTGCGACGATCCTGAGATTGCTACACTCT
GCTTGGATGGTATACGTTGTGCTATTCGAATCGCATGCATCTTCCACATG
TCCCTGGAGCGAGATGCCTATGTACAAGCCCTGGCCAGGTTTACTCTCCT
GAATGCTAACTCGCCCATCAACGAAATGAAGGCCAAGAATATCGATACCA
TCAAGACGCTTATAATGGTAGCCCACACGGATGGCAATTATCTGGGCAGC
AGCTGGCTGGATATAGTGAAGTGCATTAGCCAGTTGGAGCTGGCCCAACT
GATCGGCACTGGGGTGCGGCCCCAGTTTCTTTCTGGAGCGCAGACAACGC
TCAAGGACTCGCTTAATCCCAGCGTGAAAGAACACATCGGCGAGACGAGC
AGCCAGAGCGTGGTGGTCGCAGTCGATCGTATTTTCACCGGCTCAATGCG
ACTGGATGGCGATGCTATCGTGGACTTCGTGAAGGCCCTGTGCCAGGTGT
CTGTGGATGAGCTTCAGCAGCAGCAACCGAGGATGTTCTCCTTGCAAAAG
ATAGTGGAAATTAGTTACTACAACATGGAGCGTATTCGTCTGCAGTGGTC
ACGCATTTGGCAAGTTTTGGGTGAGCACTTTAACGCGGTCGGATGCAATA
GCAACGAGGAGATCTCATTTTTCGCCCTGGACTCACTGCGTCAGTTGTCG
ATGAAGTTCATGGAGAAGGGCGAGTTCAGTAATTTCCGCTTCCAGAAGGA
TTTCCTGCGTCCCTTTGAGCATATCATGAAGAAAAACGCATCGCCGGCAA
TACGAGATATGGTGGTGCGCTGCATTGCCCAGATGGTAAACTCACAGGCG
CATAACATCCGTTCCGGCTGGAAGAATATCTTTAGCATTTTCCACCTGGC
AGCGGGAGACAACGAAGAGCCAATTGTGGAGCTGGCCTTCCAAACCACGG
GCAAAATCATCGGTGATCTGTACAAGCGTCAGTTCGCCATTATGGTGGAC
TCGTTCCAGGATGCGGTCAAGTGCCTGTCAGAGTTCGCCACCGCCAGATT
CCCCGATACCAGCATGGAAGCCATACGTCTGGTCCGTACCTGCGCGCAGT
GCGTCCACGAGGCACCACAACTGTTTGCGGAGCATGCCGGCATGGAGAAC
GACGCCTCGGTGGCCGAGGAGGATCGAGTCTGGGTGCGCGGCTGGTTTCC
GATGCTATTCTCGCTTTCCTGCGTGGTCAATCGCTGCAAATTGGATGTGC
GTACTCGCGCCTTAACCGTGCTTTTTGAGATTGTGAAGACGTATGGTGAG
AGCTTCAAGCCCCATTGGTGGAAGGATCTCTTCAATGTGATCTTCCGTAT
CTTCGACAACATGAAATTGCCGGAGCACGTCACCGAGAAGTCCGAATGGA
TGACGACCACATGCAACCACGCCTTGTACGCTATTATTGATGTCTTCACG
CAGTATTTCGATGTTCTTGGTCATCTGCTGCTGGAGGAGCTCTTCGCCCA
GCTGCATTGGTGTGTTCAGCAGAGTAACGAGCAGTTGGCGCGATCTGGCA
CCAATTGCCTGGAGAACCTCGTCATTTCGAATGGATTCAAGTTCAACGAG
TCCACCTGGGACAAGACGTGCCAGTGCATCCTGGACATCTTCAACGCCAC
TTTGCCGCAGGATCTCCTCAGTTGGCGGCCGAAAGCACATTCCAGTAACA
ATATACCCCAGGAGCACAACCACTTTGAGGCGCTGCATATCCGCTGCGTA
GTCCAGCTGGAACTGATACAGACCATGGATAACATTGTCTTTTTCCCGGC
CACGTCGCGCAAGGAGGATGCCGAAACGCTGGCCCAGGCGGCGGCAGACT
TAACAGGCGGCAGGAGCGGTTCGCAGTCGCAGCTGCTGGAGTGCCAGCGG
GAGGAGCAGGGAATGTACGGCTATCTGAGAACCCGCCAGCTGCTCACCCT
GGCCGACTGTCTGATGCAGTCGCACCGTTTTGCCAAGCGCTTCAACGCCG
ATCACGACCAACGCAGCCTGCTTTGGCGGGCGGGATTCAAGGGATCTGTT
AAACCGAATCTGCTGAAGCAGGAGACCTCGTCGCTGGCCTGCGTCCTGCG
CATTTTCTTCAAGATGTACGGCGACGAGAATAGACGCAGCGATTGGCCCG
GCATCGAGCAGGAACTGGTGCAGGTCTGCAAGGAGGCACTGGGCTACTAT
TTGAGTTTGCAGAGCGAGGCACACCGAGATGCGTGGACATCGCTGCTGCT
GCTCATCCTGACGCGCCTGCTCAAGATGTCCGATGCCAGGTTCGCCACCC
ACGTTTCCAACTACTACAGCCTGCTGTGCGAGATGATGTGCTTCGACCTC
AAGCCCGAACTGAGAAGTGTCCTTAGGCGTGTGTTCATGCGCATCGGTCC
AGTATTCAATATAATGAGCGTTAAATAGAAGCTTTCTAGACCAT
BS08166.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:11:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sec71-RA | 4962 | CG7578-PA | 1..4962 | 17..4978 | 24810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:11:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sec71-RA | 5818 | CG7578-RA | 328..5289 | 17..4978 | 24810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:11:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13794892..13798938 | 794..4840 | 20235 | 100 | Plus |
| 2L | 23513712 | 2L | 13793848..13794632 | 17..801 | 3910 | 99.9 | Plus |
| 2L | 23513712 | 2L | 13799007..13799145 | 4840..4978 | 695 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 13:11:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| flea | 5034 | flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). | 4628..4712 | 3857..3945 | 130 | 62.9 | Plus |
BS08166.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:50:21 Download gff for
BS08166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sec71-RA | 302..5263 | 17..4978 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:27:39 Download gff for
BS08166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sec71-RA | 328..5283 | 17..4972 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:10:47 Download gff for
BS08166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sec71-RA | 302..5257 | 17..4972 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:13:01 Download gff for
BS08166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sec71-RA | 328..5283 | 17..4972 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:13:01 Download gff for
BS08166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13793848..13794628 | 17..797 | 100 | -> | Plus |
| 2L | 13794896..13798938 | 798..4840 | 100 | -> | Plus |
| 2L | 13799008..13799139 | 4841..4972 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:27:39 Download gff for
BS08166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13793848..13794628 | 17..797 | 100 | -> | Plus |
| arm_2L | 13794896..13798938 | 798..4840 | 100 | -> | Plus |
| arm_2L | 13799008..13799139 | 4841..4972 | 100 | | Plus |
BS08166.5prime Sequence
858 bp (784 high quality bases) assembled on 2006-01-06
> BS08166.5prime
GAAGTTATCAGTCGACATGCACAACAACTCCACAAAAACCAAGGAAATGT
TCATCGTGCGTGCTCTAGAAAAGATCCTTGCCGATAAGGACATACGGCGC
TCCCATCACTCGCAGCTGAAGAAGTCCTGCGATTCGGCGCTGGAGCAGAT
TAAGGCGGAGCTAATCAGTGCCGGCCAGATCGCAGAGGGCAATGAGCTGC
CCTGTGCCGCACTCCCGCTGCCCAAGAATGATGCAGCGAGCATCATAAAT
GCGGAGACCTACTTTCTCCCCTTCGAGCTTGCCTGCAAGAGCCGCTCGCC
CAGGATCGTGGTCACCGCACTGGACTGCCTGCAGAAACTCATTGCCTATG
GCCATTTGACAGGATCCATTCAGGACTCGGCCAATCCGGGTCACCTGCTC
ATCGACCGTATCGTTGTGACCATATATGGCTGCTTCAGTGGTCCCCAGAC
GGACGAGGCCGTCCAACTGCAGATAATAAAGGCTCTGCTCACGGTGGTCA
CCTCGCAGCATGTGGAAATCCATGAATTCACACTGCTGCAAGCTGTGCGC
ACCTGCTACGACATCTATTTGTCCAGCAAGAACCTGGTCAATCAGACCAC
AGCACGCGCTACGCTCACCCAAATGTTGAACGTGATATTTGCCCGCATGG
AGAATCAAGTGTACGAGCTACCACCTCCCAATTCCAATCCCACCAACGGC
AGCATCCACTCGGAGGATTGCAATGGCTCGGGAGAGGAGTCGCTGCGGGA
TTCCGACGAAGTAATTGCCTCGGAACTGCTGGCGGAGATCATATCAGCTG
CCTACAATGAGGCGATGAAGGATCAGGAATCGGTCGGTGAGCCAGACCAA
CACTTAAT
BS08166.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:03:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7578-PA | 4962 | CG7578-RA | 1..830 | 17..846 | 4150 | 100 | Plus |
| CG7578-PB | 4845 | CG7578-RB | 1..830 | 17..846 | 4150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:02:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sec71-RA | 5818 | CG7578-RA | 328..1170 | 17..858 | 4190 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:02:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13793848..13794632 | 17..801 | 3910 | 99.9 | Plus |
| 2L | 23513712 | 2L | 13794892..13794957 | 794..858 | 280 | 98.5 | Plus |
Blast to na_te.dros performed on 2015-02-12 12:02:05 has no hits.
BS08166.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:35:43 Download gff for
BS08166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7578-PB | 1..843 | 17..858 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:33:24 Download gff for
BS08166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7578-PB | 1..843 | 17..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:55:58 Download gff for
BS08166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sec71-RA | 328..1170 | 17..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:49:45 Download gff for
BS08166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sec71-RA | 328..1170 | 17..858 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:49:45 Download gff for
BS08166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13793848..13794628 | 17..797 | 100 | -> | Plus |
| 2L | 13794896..13794957 | 798..858 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:55:58 Download gff for
BS08166.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13793848..13794628 | 17..797 | 100 | -> | Plus |
| arm_2L | 13794896..13794957 | 798..858 | 98 | | Plus |
BS08166.pep Sequence
Translation from 16 to 4977
> BS08166.pep
MHNNSTKTKEMFIVRALEKILADKDIRRSHHSQLKKSCDSALEQIKAELI
SAGQIAEGNELPCAALPLPKNDAASIINAETYFLPFELACKSRSPRIVVT
ALDCLQKLIAYGHLTGSIQDSANPGHLLIDRIVVTIYGCFSGPQTDEAVQ
LQIIKALLTVVTSQHVEIHEFTLLQAVRTCYDIYLSSKNLVNQTTARATL
TQMLNVIFARMENQVYELPPPNSNPTNGSIHSEDCNGSGEESLRDSDEVI
ASELLAEIISAAYNEAMKDQESVGEPEPTLNGNDYSSHSDHDSVELHSEN
DAVVTAKFTHILQKDAFLVFRALCKLSMKPLPDGHPDPKSHELRSKVLSL
HLLLLILQNAGPVFRSNEMFIMAIKQYLCVALSNNGVSLVPEVFELSLSI
FVALLSNFKVHLKRQIEVFFKEIFLNILEANSSSFEHKWMVIQALTRICA
DAQSVVDIYVNYDCDFSAANLFERLVNDLSKIAQGRQALELGANPMQEKS
MRIRGLECLVSILKCMVEWSKDLYVNPNMPVPPMQVQSPTSTEQDQADTT
IQTMHSGSSHSLNSNQEQLQDLPEALEERKMRKEVMETGIELFNRKPQKG
VQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAY
IDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQ
LFQSADTVYVLAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDL
PEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQAFITEKRRKLLWNME
MEVISLTATNLMQSVSHVKSPFTSAKHLEHVRPMFKMAWTPFLAAFSVGL
QDCDDPEIATLCLDGIRCAIRIACIFHMSLERDAYVQALARFTLLNANSP
INEMKAKNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIGTGV
RPQFLSGAQTTLKDSLNPSVKEHIGETSSQSVVVAVDRIFTGSMRLDGDA
IVDFVKALCQVSVDELQQQQPRMFSLQKIVEISYYNMERIRLQWSRIWQV
LGEHFNAVGCNSNEEISFFALDSLRQLSMKFMEKGEFSNFRFQKDFLRPF
EHIMKKNASPAIRDMVVRCIAQMVNSQAHNIRSGWKNIFSIFHLAAGDNE
EPIVELAFQTTGKIIGDLYKRQFAIMVDSFQDAVKCLSEFATARFPDTSM
EAIRLVRTCAQCVHEAPQLFAEHAGMENDASVAEEDRVWVRGWFPMLFSL
SCVVNRCKLDVRTRALTVLFEIVKTYGESFKPHWWKDLFNVIFRIFDNMK
LPEHVTEKSEWMTTTCNHALYAIIDVFTQYFDVLGHLLLEELFAQLHWCV
QQSNEQLARSGTNCLENLVISNGFKFNESTWDKTCQCILDIFNATLPQDL
LSWRPKAHSSNNIPQEHNHFEALHIRCVVQLELIQTMDNIVFFPATSRKE
DAETLAQAAADLTGGRSGSQSQLLECQREEQGMYGYLRTRQLLTLADCLM
QSHRFAKRFNADHDQRSLLWRAGFKGSVKPNLLKQETSSLACVLRIFFKM
YGDENRRSDWPGIEQELVQVCKEALGYYLSLQSEAHRDAWTSLLLLILTR
LLKMSDARFATHVSNYYSLLCEMMCFDLKPELRSVLRRVFMRIGPVFNIM
SVK*
BS08166.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:45:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sec71-PA | 1653 | CG7578-PA | 1..1653 | 1..1653 | 8557 | 100 | Plus |
| step-PA | 410 | CG11628-PA | 68..267 | 571..774 | 448 | 45.6 | Plus |
| step-PE | 727 | CG11628-PE | 385..584 | 571..774 | 448 | 45.6 | Plus |
| step-PD | 727 | CG11628-PD | 385..584 | 571..774 | 448 | 45.6 | Plus |
| step-PC | 727 | CG11628-PC | 385..584 | 571..774 | 448 | 45.6 | Plus |
