Clone BS08191 Report

Search the DGRC for BS08191

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:81
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG5276-RA
Protein status:BS08191.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS08191.3prime Sequence

928 bp (694 high quality bases) assembled on 2006-01-06

> BS08191.3prime
ATGGTCTAGAAAGCTTCTAAATGAACTCGAATCCCTCATACTTGTAGTCC
GTCTCGATCCTCGTTTCGGGCAGCAGTGTCTTGCCCGCAATATCGAAGGC
TGTGATGAAGGTGGCCGTCTTGCCATTCAACTCCTCCGACTTAAGAGCCA
CGATTATTGAGTCATCGGTGCCGGGCAAGAACTTAAAGCTAGAGAAACCA
TGCGTGGGCGTTGTATTTTCAGGATCGAGCCGTACAGTCTCAACGTTGGT
GAAGCTTTCGTCGGCGGAGACCAGGACATTGCAGCCCATGTGCTCGTCCT
TGGTTTCGTTGTATTTCTCTTTCGAACACCGCCTAGGCAGGAAAAACCAG
CGATTCCTTTCCTCTGACCAGGTTCCACTCTCGTGGATCATGTAGCCCGG
CCAGGTTATTTGCATCGACTGCAGGCGCAACTGCTTGAAATTGTCCACCC
AGTTGAGCGACCTCACCTCGCCGGACGGAGTGATGGCCTTTACGTACATG
GGGTTATTGTTCTCGAAATCACCCGCACTTGTCGTCCACTCCTTGCCCAT
GGAGCCCACATACAGCGTTTGCTCTTTCACTGTGGCCCATTCGGCCTTGA
AGCCCTTGGCACTGTGTCCGTCTCCATCGAGCAGGATCACCCAGGGAATG
GGCTTGTCATTCACAATCTCGTATATCAAACCCGTTCGGTCGTCGAAGGT
GAGCAGGCGCCCGTTGAAGGTGACTAGCTCAGATAGCTCCATTCCGCGGC
CCTTAAGGGCAAATGCTGATTCCAGGACTATCGGCGCCCCGTCATCCCAG
CTAATCTGGATCTCTGACCTGGCCACCGTGTAGGTAAGGTAGCCCTTCTT
CAGGTAGCTACGCCACGTGCTGCTCCCATCGCCCTTGCTCACCTTGGAAC
TGGGTGTCAGATCGGCAATCATGGCTAT

BS08191.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:03:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG5276-PA 1260 CG5276-RA 374..1260 903..17 4435 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:22:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG5276-RB 1608 CG5276-RB 446..1357 928..17 4515 99.8 Minus
CG5276-RA 1752 CG5276-RA 590..1501 928..17 4515 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:22:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11432327..11432940 928..315 3010 99.3 Minus
3R 32079331 3R 11432995..11433292 314..17 1490 100 Minus
Blast to na_te.dros performed on 2015-02-12 04:22:39 has no hits.

BS08191.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:36:31 Download gff for BS08191.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5276-PA 349..1260 17..928 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:34:27 Download gff for BS08191.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5276-PA 349..1260 17..928 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 22:44:49 Download gff for BS08191.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5276-RA 590..1503 12..928 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:55:13 Download gff for BS08191.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5276-RA 590..1503 12..928 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:55:13 Download gff for BS08191.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11432327..11432940 315..928 99 -> Minus
3R 11432995..11433294 12..314 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 22:44:49 Download gff for BS08191.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7258717..7259016 12..314 99   Minus
arm_3R 7258049..7258662 315..928 99 -> Minus

BS08191.5prime Sequence

927 bp (799 high quality bases) assembled on 2006-01-06

> BS08191.5prime
GAAGTTATCAGTCGACATGCAGAGCCCTGCCTTCGCGTACCGGGAACACG
CAGAACACTCGCCGCGCGCCATGTACATGCGCGACTGGCGATCGGCCCTG
CGGACGCCCACGTACCGGATTGGGAATCGGACGGTGCGCTTTAACTATCA
CTTCGCCCTTCTGATTGTTTGCGCCTTCGTACTCGTCCTACTCTTCTACT
TTGCGCGCCAGGGATCGCACTCCTCCTCCGACGGCTACTGGCTGCGCCGC
AGTTACACGGATGCCCGGAGTCTGGACAATGGTGGTCCAGTGGTCCAGGC
CTACAATGCCACATATCCGCTCACGTCACCCATGGTGCTGCGTGGCGGTG
TGATAAACTACCGGATAGCCATGATTGCCGATCTGGACACCAGTTCCAAG
GTGAGCAAGGGCGATGGGAGCAGCACGTGGCGTAGCTACCTGAAGAAGGG
CTACCTTACCTACACGGTGGCCAGGTCAGAGATCCAGATTAGCTGGGATG
ACGGGGCGCCGATAGTCCTGGAATCAGCATTTGCCCTTAAGGGCCGCGGA
ATGGAGCTATCTGAGCTAGTCACCTTCAACGGGCGCCTGCTCACCTTCGA
CGACCGAACGGGTTTGATATACGAGATTGTGAATGACAAGCCCATTCCCT
GGGTGATCCTGCTCGATGGAGACGGACACAGTGCCAAGGGCTTCAAGGCC
GAATGGGCCACAGTGAAAGAGCAAACGCTGTATGTGGGCTCCATGGGCAA
GGAGTGGACGACAAGTGCGGGTGATTTCGAGAACAATAACCCCATGTACG
TAAAGGCCATCACTCCGTCCGGCGAGGTGAGGTCGCTCAACTGGGTGGAC
AATTTTCAGCAGTTGCGCCTGCAGTCGATGCAAATAACCTGGCCGGGCTA
CATGATCCACGAGAGTGGAACCTGGTC

BS08191.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:03:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG5276-PA 1260 CG5276-RA 1..911 17..927 4505 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:52:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG5276-RB 1608 CG5276-RB 98..1008 17..927 4525 99.8 Plus
CG5276-RA 1752 CG5276-RA 242..1152 17..927 4525 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:52:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11431979..11432889 17..927 4525 99.8 Plus
Blast to na_te.dros performed on 2015-02-11 17:52:14 has no hits.

BS08191.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:36:32 Download gff for BS08191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5276-PA 1..911 17..927 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:34:28 Download gff for BS08191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5276-PA 1..911 17..927 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:22:05 Download gff for BS08191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5276-RA 242..1152 17..927 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:31:06 Download gff for BS08191.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5276-RA 242..1152 17..927 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:31:06 Download gff for BS08191.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11431979..11432889 17..927 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:22:05 Download gff for BS08191.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7257701..7258611 17..927 99   Plus

BS08191.complete Sequence

1292 bp (1292 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ636128

> BS08191.complete
GAAGTTATCAGTCGACATGCAGAGCCCTGCCTTCGCGTACCGGGAACACG
CAGAACACTCGCCGCGCGCCATGTACATGCGCGACTGGCGATCGGCCCTG
CGGACGCCCACGTACCGGATTGGGAATCGGACGGTGCGCTTTAACTATCA
CTTCGCCCTTCTGATTGTTTGCGCCTTCGTACTCGTCCTACTCTTCTACT
TTGCGCGCCAGGGATCGCACTCCTCCTCCGACGGCTACTGGCTGCGCCGC
AGTTACACGGATGCCCGGAGTCTGGACAATGGTGGTCCAGTGGTCCAGGC
CTACAATGCCACATATCCGCTCACGTCACCCATGGTGCTGCGTGGCGGTG
TGATAAACTACCGGATAGCCATGATTGCCGATCTGGACACCAGTTCCAAG
GTGAGCAAGGGCGATGGGAGCAGCACGTGGCGTAGCTACCTGAAGAAGGG
CTACCTTACCTACACGGTGGCCAGGTCAGAGATCCAGATTAGCTGGGATG
ACGGGGCGCCGATAGTCCTGGAATCAGCATTTGCCCTTAAGGGCCGCGGA
ATGGAGCTATCTGAGCTAGTCACCTTCAACGGGCGCCTGCTCACCTTCGA
CGACCGAACGGGTTTGATATACGAGATTGTGAATGACAAGCCCATTCCCT
GGGTGATCCTGCTCGATGGAGACGGACACAGTGCCAAGGGCTTCAAGGCC
GAATGGGCCACAGTGAAAGAGCAAACGCTGTATGTGGGCTCCATGGGCAA
GGAGTGGACGACAAGTGCGGGTGATTTCGAGAACAATAACCCCATGTACG
TAAAGGCCATCACTCCGTCCGGCGAGGTGAGGTCGCTCAACTGGGTGGAC
AATTTCAAGCAGTTGCGCCTGCAGTCGATGCAAATAACCTGGCCGGGCTA
CATGATCCACGAGAGTGGAACCTGGTCAGAGGAAAGGAATCGCTGGTTTT
TCCTGCCTAGGCGGTGTTCGAAAGAGAAATACAACGAAACCAAGGACGAG
CACATGGGCTGCAATGTCCTGGTCTCCGCCGACGAAAGCTTCACCAACGT
TGAGACTGTACGGCTCGATCCTGAAAATACAACGCCCACGCATGGTTTCT
CTAGCTTTAAGTTCTTGCCCGGCACCGATGACTCAATAATCGTGGCTCTT
AAGTCGGAGGAGTTGAATGGCAAGACGGCCACCTTCATCACAGCCTTCGA
TATTGCGGGCAAGACACTGCTGCCCGAAACGAGGATCGAGACGGACTACA
AGTATGAGGGATTCGAGTTCATTTAGAAGCTTTCTAGACCAT

BS08191.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:42:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG5276-RB 1260 CG5276-PB 1..1260 17..1276 6300 100 Plus
CG5276-RA 1260 CG5276-PA 1..1260 17..1276 6300 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:42:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG5276-RB 1608 CG5276-RB 98..1357 17..1276 6300 100 Plus
CG5276-RA 1752 CG5276-RA 242..1501 17..1276 6300 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:42:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11431979..11432940 17..978 4810 100 Plus
3R 32079331 3R 11432995..11433292 979..1276 1490 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:42:32 has no hits.

BS08191.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:03:56 Download gff for BS08191.complete
Subject Subject Range Query Range Percent Splice Strand
CG5276-RA 1..1260 17..1276 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:42:00 Download gff for BS08191.complete
Subject Subject Range Query Range Percent Splice Strand
CG5276-RA 242..1503 17..1281 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:57:57 Download gff for BS08191.complete
Subject Subject Range Query Range Percent Splice Strand
CG5276-RA 242..1501 17..1276 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:03:57 Download gff for BS08191.complete
Subject Subject Range Query Range Percent Splice Strand
CG5276-RA 242..1503 17..1281 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:25:16 Download gff for BS08191.complete
Subject Subject Range Query Range Percent Splice Strand
CG5276-RA 242..1501 17..1276 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:25:16 Download gff for BS08191.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11431979..11432940 17..978 100 -> Plus
3R 11432995..11433292 979..1276 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:57:57 Download gff for BS08191.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7257701..7258662 17..978 100 -> Plus
arm_3R 7258717..7259014 979..1276 100   Plus

BS08191.pep Sequence

Translation from 16 to 1275

> BS08191.pep
MQSPAFAYREHAEHSPRAMYMRDWRSALRTPTYRIGNRTVRFNYHFALLI
VCAFVLVLLFYFARQGSHSSSDGYWLRRSYTDARSLDNGGPVVQAYNATY
PLTSPMVLRGGVINYRIAMIADLDTSSKVSKGDGSSTWRSYLKKGYLTYT
VARSEIQISWDDGAPIVLESAFALKGRGMELSELVTFNGRLLTFDDRTGL
IYEIVNDKPIPWVILLDGDGHSAKGFKAEWATVKEQTLYVGSMGKEWTTS
AGDFENNNPMYVKAITPSGEVRSLNWVDNFKQLRLQSMQITWPGYMIHES
GTWSEERNRWFFLPRRCSKEKYNETKDEHMGCNVLVSADESFTNVETVRL
DPENTTPTHGFSSFKFLPGTDDSIIVALKSEELNGKTATFITAFDIAGKT
LLPETRIETDYKYEGFEFI*

BS08191.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:48:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG5276-PB 419 CG5276-PB 1..419 1..419 2223 100 Plus
CG5276-PA 419 CG5276-PA 1..419 1..419 2223 100 Plus