Clone Sequence Records
BS08196.3prime Sequence
857 bp (721 high quality bases) assembled on 2006-01-06
> BS08196.3prime
ATGGTCTAGAAAGCTTTTAATCAAAGCTAATCAGTTCCGCCGTAGCCGGC
TCCTCAGCTTTAACGGGCGCGGGTCCCGGTTCGTTTTGCGGCGGAGCAGG
TGCAGCAGCCACCGCTTGGACTTGATTGTTGGCGATTTCGGTAACTGGAG
GTGCCTGTGCTGCTGGAGGAGCCTGGTGCTGCTGCAGCATTACGTGACCC
ATTTGGGGTTGTGGCTGAGGTTGCTGGACAGGAATCTGCTGTGGCTGCTG
ACCAGGAATCTGTTGAGGCTGCTGACCAGGAATCTGTTGAGGCTGCTGAC
CAGGAATCTGTTGAGGCTGCTGACCAGGAATCTGTTGAGGCTGCGGTTGG
AATGGTATTTGAGGAGGCTGGGCGATCGAATGCTGCTGCGGCAGCTGGAG
GATAGCAGCAGGATTGTTGGCAAACTGATTTTCGGGCATGGGCGGCATCA
TCTGGGGATTTCCAGGTGGCGCGGGCTGTTGCATTAATCCGCCGGGCTGG
AGATTCGGCGGCATCGGCTGCTGTATTGCCGGATTGTACATGCCCGGCGG
AATGGCCTGAAACTGGCCATGTCCGTTGGGAGCCGGTGCAGGACCCTGAG
GCAAATAGCCGGGCACACCGGCAGCATAGGGATTATAAACGTTGTTGAGC
TGATGCGAGGGCGAACCATGTTGTGGCACCGCCGATGGTGGCATGTAGGG
GAAAGGTGGAGCCGACTGGCCCATCAAATACTGCGCCTTCTGCTGCTCCT
GGCGCAGCTGCATCTCGCGCTCCTGCTCCTGAATGCGCTGCAATGCTAGC
TGTCGTTGATACTGCAAATACTCCTGCTTTCTCTTGCGCATTATGTCCAG
TTTCTGG
BS08196.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:04:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2903-PB | 2283 | Hrs-RB | 1443..2283 | 857..17 | 4105 | 99.5 | Minus |
| CG2903-PC | 2283 | Hrs-RC | 1443..2283 | 857..17 | 4105 | 99.5 | Minus |
| CG2903-PA | 1944 | Hrs-RA | 1104..1944 | 857..17 | 4105 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:48:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hrs-RA | 2251 | CG2903-RA | 1119..1959 | 857..17 | 4145 | 99.5 | Minus |
| Hrs-RC | 2665 | CG2903-RC | 1533..2373 | 857..17 | 4145 | 99.5 | Minus |
| Hrs-RB | 2714 | CG2903-RB | 1582..2422 | 857..17 | 4145 | 99.5 | Minus |
| Hrs-RA | 2251 | CG2903-RA | 1632..1712 | 296..216 | 330 | 93.8 | Minus |
| Hrs-RA | 2251 | CG2903-RA | 1680..1760 | 344..264 | 330 | 93.8 | Minus |
| Hrs-RC | 2665 | CG2903-RC | 2046..2126 | 296..216 | 330 | 93.8 | Minus |
| Hrs-RC | 2665 | CG2903-RC | 2094..2174 | 344..264 | 330 | 93.8 | Minus |
| Hrs-RA | 2251 | CG2903-RA | 1632..1688 | 272..216 | 210 | 91.2 | Minus |
| Hrs-RA | 2251 | CG2903-RA | 1704..1760 | 344..288 | 210 | 91.2 | Minus |
| Hrs-RC | 2665 | CG2903-RC | 2046..2102 | 272..216 | 210 | 91.2 | Minus |
| Hrs-RC | 2665 | CG2903-RC | 2118..2174 | 344..288 | 210 | 91.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:48:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2742245..2743085 | 857..17 | 4145 | 99.5 | Minus |
| 2L | 23513712 | 2L | 2742782..2742888 | 344..238 | 445 | 94.4 | Minus |
| 2L | 23513712 | 2L | 2742758..2742864 | 320..214 | 445 | 94.4 | Minus |
| 2L | 23513712 | 2L | 2742758..2742838 | 296..216 | 330 | 93.8 | Minus |
| 2L | 23513712 | 2L | 2742806..2742886 | 344..264 | 330 | 93.8 | Minus |
| 2L | 23513712 | 2L | 2742758..2742814 | 272..216 | 210 | 91.2 | Minus |
| 2L | 23513712 | 2L | 2742830..2742886 | 344..288 | 210 | 91.2 | Minus |
Blast to na_te.dros performed 2015-02-10 18:48:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2629 | 397..152 | 156 | 54 | Minus |
BS08196.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:36:40 Download gff for
BS08196.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hrs-PC | 1443..2283 | 17..857 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:34:39 Download gff for
BS08196.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2903-PA | 1104..1944 | 17..857 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:03:38 Download gff for
BS08196.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hrs-RB | 1582..2422 | 17..857 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:02:23 Download gff for
BS08196.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hrs-RB | 1582..2422 | 17..857 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:02:23 Download gff for
BS08196.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2742245..2743085 | 17..857 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:03:38 Download gff for
BS08196.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2742245..2743085 | 17..857 | 99 | | Minus |
BS08196.5prime Sequence
810 bp (722 high quality bases) assembled on 2006-01-06
> BS08196.5prime
GAAGTTATCAGTCGACATGTTTCGATCAAGTTTCGACAAAAACTTAGAAA
ATGCCACCAGTCACTTGCGTCTGGAGCCCGACTGGCCATCAATTCTTCTG
ATTTGCGATGAAATCAACCAGAAAGATGTCACTCCCAAGAATGCCTTTGC
CGCCATCAAGAAGAAGATGAACTCGCCCAACCCGCACTCCTCCTGCTATT
CCCTCCTGGTCCTCGAGAGCATCGTCAAGAACTGCGGCGCACCCGTTCAC
GAGGAGGTGTTCACCAAGGAGAACTGCGAGATGTTCAGCAGTTTCCTCGA
GTCGACGCCCCACGAGAACGTGCGCCAGAAGATGCTGGAGCTGGTGCAGA
CCTGGGCGTACGCCTTCCGCTCCTCGGACAAGTACCAGGCCATCAAGGAC
ACCATGACCATCCTGAAGGCGAAGGGGCACACTTTCCCCGAACTTCGGGA
GGCAGATGCCATGTTCACGGCGGACACGGCGCCCAACTGGGCAGATGGCA
GGGTATGCCATCGCTGTCGCGTGGAGTTCACCTTCACCAACCGGAAGCAC
CACTGCCGGAACTGCGGCCAGGTCTTCTGTGGCCAATGCACGGCCAAGCA
GTGTCCGCTGCCCAAGTACGGCATCGAAAAGGAGGTGCGTGTGTGCGACG
GCTGCTTCGCTGCCCTCCAGCGTCCGACGAGCGGCAGTGGAGGCGCTAAG
TCCGGACCACGTCCGGCGGACAGCGAGCTACCGGCGGAGTATCTGAACAG
CACTTTGGCGCAGCAGGTGCAGACACCAGCTCGCAAGACCGAGCAGGAAC
TCAAGGAGGA
BS08196.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:04:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2903-PB | 2283 | Hrs-RB | 1..794 | 17..810 | 3970 | 100 | Plus |
| CG2903-PC | 2283 | Hrs-RC | 1..794 | 17..810 | 3970 | 100 | Plus |
| CG2903-PA | 1944 | Hrs-RA | 43..455 | 398..810 | 2065 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:15:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hrs-RC | 2665 | CG2903-RC | 89..884 | 15..810 | 3980 | 100 | Plus |
| Hrs-RB | 2714 | CG2903-RB | 138..933 | 15..810 | 3980 | 100 | Plus |
| Hrs-RA | 2251 | CG2903-RA | 58..470 | 398..810 | 2065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:15:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2741106..2741482 | 396..772 | 1885 | 100 | Plus |
| 2L | 23513712 | 2L | 2740520..2740785 | 133..398 | 1330 | 100 | Plus |
| 2L | 23513712 | 2L | 2740387..2740473 | 46..132 | 435 | 100 | Plus |
| 2L | 23513712 | 2L | 2741557..2741596 | 771..810 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 23:15:52 has no hits.
BS08196.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:36:41 Download gff for
BS08196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hrs-PC | 1..793 | 17..809 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:34:41 Download gff for
BS08196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2903-PC | 1..793 | 17..809 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:53:25 Download gff for
BS08196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hrs-RB | 132..932 | 9..809 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:49:26 Download gff for
BS08196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hrs-RB | 132..932 | 9..809 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:49:26 Download gff for
BS08196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2740173..2740211 | 9..47 | 92 | -> | Plus |
| 2L | 2740389..2740473 | 48..132 | 100 | -> | Plus |
| 2L | 2740520..2740784 | 133..397 | 100 | -> | Plus |
| 2L | 2741108..2741482 | 398..772 | 100 | -> | Plus |
| 2L | 2741559..2741595 | 773..809 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:53:25 Download gff for
BS08196.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2740173..2740211 | 9..47 | 92 | -> | Plus |
| arm_2L | 2740389..2740473 | 48..132 | 100 | -> | Plus |
| arm_2L | 2740520..2740784 | 133..397 | 100 | -> | Plus |
| arm_2L | 2741108..2741482 | 398..772 | 100 | -> | Plus |
| arm_2L | 2741559..2741595 | 773..809 | 100 | | Plus |
BS08196.complete Sequence
2315 bp assembled on 2010-05-10
GenBank Submission: KX806114
> BS08196.complete
GAAGTTATCAGTCGACATGTTTCGATCAAGTTTCGACAAAAACTTAGAAA
ATGCCACCAGTCACTTGCGTCTGGAGCCCGACTGGCCATCAATTCTTCTG
ATTTGCGATGAAATCAACCAGAAAGATGTCACTCCCAAGAATGCCTTTGC
CGCCATCAAGAAGAAGATGAACTCGCCCAACCCGCACTCCTCCTGCTATT
CCCTCCTGGTCCTCGAGAGCATCGTCAAGAACTGCGGCGCACCCGTTCAC
GAGGAGGTGTTCACCAAGGAGAACTGCGAGATGTTCAGCAGTTTCCTCGA
GTCGACGCCCCACGAGAACGTGCGCCAGAAGATGCTGGAGCTGGTGCAGA
CCTGGGCGTACGCCTTCCGCTCCTCGGACAAGTACCAGGCCATCAAGGAC
ACCATGACCATCCTGAAGGCGAAGGGGCACACTTTCCCCGAACTTCGGGA
GGCAGATGCCATGTTCACGGCGGACACGGCGCCCAACTGGGCAGATGGCA
GGGTATGCCATCGCTGTCGCGTGGAGTTCACCTTCACCAACCGGAAGCAC
CACTGCCGGAACTGCGGCCAGGTCTTCTGTGGCCAATGCACGGCCAAGCA
GTGTCCGCTGCCCAAGTACGGCATCGAAAAGGAGGTGCGTGTGTGCGACG
GCTGCTTCGCTGCCCTCCAGCGTCCGACGAGCGGCAGTGGAGGCGCTAAG
TCCGGACCACGTCCGGCGGACAGCGAGCTACCGGCGGAGTATCTGAACAG
CACTTTGGCGCAGCAGGTGCAGACACCAGCTCGCAAGACCGAGCAGGAAC
TCAAGGAGGAGGAGGAACTGCAGCTGGCGCTGGCCCTCAGTCAATCGGAA
GCGGAGCAGCAGAAGCCCAAGCTGCAATCCCTGCCACCCGCTGCCTATCG
CATGCAGCAAAGGTCTCCCAGTCCGGAGGCACCGCCAGAACCCAAGGAGT
ATCACCAGCAGCCGGAGGAGGCTACCAATCCGGAGCTGGCCAAGTACTTG
AACCGCAGCTACTGGGAGCAGCGCAAGATCAGCGAATCGTCATCCATGGC
AAGTCCCTCGGCACCGAGCCCCATGCCACCAACGCCGCAGCCCCAGCAGA
TCATGCCCCTGCAGGTCAAGAGTGCGGATGAAGTGCAGATCGATGAGTTT
GCCGCCAATATGCGCACGCAGGTGGAGATCTTTGTTAACCGCATGAAGTC
GAACTCGAGCCGCGGTCGCAGCATCTCCAACGACTCCTCTGTGCAGACCC
TCTTCATGACCCTGACCTCGTTGCACTCGCAGCAGTTGTCGTACATCAAG
GAGATGGACGACAAGCGCATGTGGTACGAGCAGCTGCAGGACAAGCTAAC
CCAGATCAAGGACTCGCGTGCTGCGCTGGATCAGCTGCGTCAGGAGCATG
TGGAGAAGCTGCGCAGGATCGCCGAGGAGCAGGAACGTCAGCGACAGATG
CAGATGGCCCAGAAACTGGACATAATGCGCAAGAAGAAGCAGGAGTATCT
GCAGTATCAACGACAGCTAGCATTGCAGCGCATCCAGGAGCAGGAGCGCG
AGATGCAGCTGCGCCAGGAGCAGCAGAAGGCGCAGTATTTGATGGGCCAG
TCGGCTCCACCTTTCCCCTACATGCCACCATCGGCGGTGCCACAACATGG
TTCGCCCTCGCATCAGCTCAACAACGTTTATAATCCCTATGCTGCCGGTG
TGCCCGGCTATTTGCCTCAGGGTCCTGCACCGGCTCCCAACGGACATGGC
CAGTTTCAGGCCATTCCGCCGGGCATGTACAATCCGGCAATACAGCAGCC
GATGCCGCCGAATCTCCAGCCCGGCGGATTAATGCAACAGCCCGCGCCAC
CTGGAAATCCCCAGATGATGCCGCCCATGCCCGAAAATCAGTTTGCCAAC
AATCCTGCTGCTATCCTCCAGCTGCCGCAGCAGCATTCGATCGCCCAGCC
TCCTCAAATACCATTCCAACCGCAGCCTCAACAGATTCCTGGTCAGCAGC
CTCAACAGATTCCTGGTCAGCAGCCTCAACAGATTCCTGGTCAGCAGCCT
CAACAGATTCCTGGTCAGCAGCCACAGCAGATTCCTGTCCAGCAACCTCA
GCCACAACCCCAAATGGGTCACGTAATGCTGCAGCAGCACCAGGCTCCTC
CAGCAGCACAGGCACCTCCAGTTACCGAAATCGCCAACAATCAAGTCCAA
GCGGTGGCTGCTGCACCTGCTCCGCCGCAAAACGAACCGGGACCCGCGCC
CGTTAAAGCTGAGGAGCCGGCTACGGCGGAACTGATTAGCTTTGATTAAA
AGCTTTCTAGACCAT
BS08196.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:57:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hrs-RC | 2283 | CG2903-PC | 1..2283 | 17..2299 | 11415 | 100 | Plus |
| Hrs-RB | 2283 | CG2903-PB | 1..2283 | 17..2299 | 11415 | 100 | Plus |
| Hrs-RA | 1944 | CG2903-PA | 43..1944 | 398..2299 | 9510 | 100 | Plus |
| Hrs-RC | 2283 | CG2903-PC | 1956..2062 | 1996..2102 | 445 | 94.4 | Plus |
| Hrs-RC | 2283 | CG2903-PC | 1980..2086 | 1972..2078 | 445 | 94.4 | Plus |
| Hrs-RB | 2283 | CG2903-PB | 1956..2062 | 1996..2102 | 445 | 94.4 | Plus |
| Hrs-RB | 2283 | CG2903-PB | 1980..2086 | 1972..2078 | 445 | 94.4 | Plus |
| Hrs-RC | 2283 | CG2903-PC | 1956..2036 | 2020..2100 | 330 | 93.8 | Plus |
| Hrs-RC | 2283 | CG2903-PC | 2004..2084 | 1972..2052 | 330 | 93.8 | Plus |
| Hrs-RB | 2283 | CG2903-PB | 1956..2036 | 2020..2100 | 330 | 93.8 | Plus |
| Hrs-RB | 2283 | CG2903-PB | 2004..2084 | 1972..2052 | 330 | 93.8 | Plus |
| Hrs-RC | 2283 | CG2903-PC | 1956..2012 | 2044..2100 | 210 | 91.2 | Plus |
| Hrs-RC | 2283 | CG2903-PC | 2028..2084 | 1972..2028 | 210 | 91.2 | Plus |
| Hrs-RB | 2283 | CG2903-PB | 1956..2012 | 2044..2100 | 210 | 91.2 | Plus |
| Hrs-RB | 2283 | CG2903-PB | 2028..2084 | 1972..2028 | 210 | 91.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:57:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hrs-RC | 2665 | CG2903-RC | 89..2373 | 15..2299 | 11425 | 100 | Plus |
| Hrs-RB | 2714 | CG2903-RB | 138..2422 | 15..2299 | 11425 | 100 | Plus |
| Hrs-RA | 2251 | CG2903-RA | 58..1959 | 398..2299 | 9510 | 100 | Plus |
| Hrs-RC | 2665 | CG2903-RC | 2070..2176 | 1972..2078 | 445 | 94.4 | Plus |
| Hrs-RC | 2665 | CG2903-RC | 2046..2152 | 1996..2102 | 445 | 94.4 | Plus |
| Hrs-RB | 2714 | CG2903-RB | 2095..2201 | 1996..2102 | 445 | 94.4 | Plus |
| Hrs-RB | 2714 | CG2903-RB | 2119..2225 | 1972..2078 | 445 | 94.4 | Plus |
| Hrs-RC | 2665 | CG2903-RC | 2046..2126 | 2020..2100 | 330 | 93.8 | Plus |
| Hrs-RC | 2665 | CG2903-RC | 2094..2174 | 1972..2052 | 330 | 93.8 | Plus |
| Hrs-RB | 2714 | CG2903-RB | 2095..2175 | 2020..2100 | 330 | 93.8 | Plus |
| Hrs-RB | 2714 | CG2903-RB | 2143..2223 | 1972..2052 | 330 | 93.8 | Plus |
| Hrs-RC | 2665 | CG2903-RC | 2046..2102 | 2044..2100 | 210 | 91.2 | Plus |
| Hrs-RC | 2665 | CG2903-RC | 2118..2174 | 1972..2028 | 210 | 91.2 | Plus |
| Hrs-RB | 2714 | CG2903-RB | 2095..2151 | 2044..2100 | 210 | 91.2 | Plus |
| Hrs-RB | 2714 | CG2903-RB | 2167..2223 | 1972..2028 | 210 | 91.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:57:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2741557..2743085 | 771..2299 | 7645 | 100 | Plus |
| 2L | 23513712 | 2L | 2741106..2741482 | 396..772 | 1885 | 100 | Plus |
| 2L | 23513712 | 2L | 2740520..2740785 | 133..398 | 1330 | 100 | Plus |
| 2L | 23513712 | 2L | 2742758..2742864 | 1996..2102 | 445 | 94.4 | Plus |
| 2L | 23513712 | 2L | 2742782..2742888 | 1972..2078 | 445 | 94.4 | Plus |
| 2L | 23513712 | 2L | 2740387..2740473 | 46..132 | 435 | 100 | Plus |
| 2L | 23513712 | 2L | 2742758..2742838 | 2020..2100 | 330 | 93.8 | Plus |
| 2L | 23513712 | 2L | 2742806..2742886 | 1972..2052 | 330 | 93.8 | Plus |
| 2L | 23513712 | 2L | 2742758..2742814 | 2044..2100 | 210 | 91.2 | Plus |
| 2L | 23513712 | 2L | 2742830..2742886 | 1972..2028 | 210 | 91.2 | Plus |
Blast to na_te.dros performed 2014-11-28 01:57:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2629 | 1919..2164 | 156 | 54 | Plus |
BS08196.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-10 11:55:51 Download gff for
BS08196.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hrs-RC | 97..2371 | 23..2297 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:06:40 Download gff for
BS08196.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hrs-RB | 146..2420 | 23..2297 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:11 Download gff for
BS08196.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hrs-RB | 146..2420 | 23..2297 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:11 Download gff for
BS08196.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2741108..2741482 | 398..772 | 100 | -> | Plus |
| 2L | 2741559..2743083 | 773..2297 | 100 | | Plus |
| 2L | 2740187..2740211 | 23..47 | 100 | -> | Plus |
| 2L | 2740389..2740473 | 48..132 | 100 | -> | Plus |
| 2L | 2740520..2740784 | 133..397 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:06:40 Download gff for
BS08196.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2740187..2740211 | 23..47 | 100 | -> | Plus |
| arm_2L | 2740389..2740473 | 48..132 | 100 | -> | Plus |
| arm_2L | 2740520..2740784 | 133..397 | 100 | -> | Plus |
| arm_2L | 2741108..2741482 | 398..772 | 100 | -> | Plus |
| arm_2L | 2741559..2743083 | 773..2297 | 100 | | Plus |
BS08196.pep Sequence
Translation from 16 to 2298
> BS08196.pep
MFRSSFDKNLENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKK
MNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHE
NVRQKMLELVQTWAYAFRSSDKYQAIKDTMTILKAKGHTFPELREADAMF
TADTAPNWADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPK
YGIEKEVRVCDGCFAALQRPTSGSGGAKSGPRPADSELPAEYLNSTLAQQ
VQTPARKTEQELKEEEELQLALALSQSEAEQQKPKLQSLPPAAYRMQQRS
PSPEAPPEPKEYHQQPEEATNPELAKYLNRSYWEQRKISESSSMASPSAP
SPMPPTPQPQQIMPLQVKSADEVQIDEFAANMRTQVEIFVNRMKSNSSRG
RSISNDSSVQTLFMTLTSLHSQQLSYIKEMDDKRMWYEQLQDKLTQIKDS
RAALDQLRQEHVEKLRRIAEEQERQRQMQMAQKLDIMRKKKQEYLQYQRQ
LALQRIQEQEREMQLRQEQQKAQYLMGQSAPPFPYMPPSAVPQHGSPSHQ
LNNVYNPYAAGVPGYLPQGPAPAPNGHGQFQAIPPGMYNPAIQQPMPPNL
QPGGLMQQPAPPGNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPF
QPQPQQIPGQQPQQIPGQQPQQIPGQQPQQIPGQQPQQIPVQQPQPQPQM
GHVMLQQHQAPPAAQAPPVTEIANNQVQAVAAAPAPPQNEPGPAPVKAEE
PATAELISFD*
BS08196.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:19:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hrs-PC | 760 | CG2903-PC | 1..760 | 1..760 | 4029 | 100 | Plus |
| Hrs-PB | 760 | CG2903-PB | 1..760 | 1..760 | 4029 | 100 | Plus |
| Hrs-PA | 647 | CG2903-PA | 15..647 | 128..760 | 3358 | 100 | Plus |
| Wnk-PN | 2441 | CG7177-PN | 921..1382 | 231..723 | 244 | 25 | Plus |
| Wnk-PL | 2441 | CG7177-PL | 921..1382 | 231..723 | 244 | 25 | Plus |
| Wnk-PN | 2441 | CG7177-PN | 915..1376 | 244..741 | 196 | 23.7 | Plus |
| Wnk-PN | 2441 | CG7177-PN | 782..1121 | 427..728 | 161 | 26.3 | Plus |
