Clone Sequence Records
BS08227.3prime Sequence
455 bp (454 high quality bases) assembled on 2006-01-10
> BS08227.3prime
ATGGTCTAGAAAGCTTCGCTATTCATCAGACTCCGATTCCGATTCGGACT
CTTCTTCATCGTCATCATCGTCGTCGTCATCGTCGTCGTCGCTGCCGGCG
GAGCGATTTAGCCGCAGCATCTCCTGGAACTGGTGTACACGGATCTTTTG
CGGCACGATCTGCAGCAGAAACTCCAGATTCTTGTTCTTATTGACCACCT
GGGAGAGATGCTCGTACTTGAGCGCTTCGCCCGGTCGCTGGCCGAATTCC
TCCGTGTATGCCGCGCCCGCCAAATGGCGAACGAATAGCTCCGTGCACTT
GGTCATCAGGAAGAGCACCTCGTTGGTGATCAAGCCCGTGTCCATGGAGC
TCTTCATGATCGTTCGCACGCGGCTGAGGGGCAGAAAGGTTTCCGCGGTC
GGTGGACGCTCCACGGGTGGTTGGCTCCTTGGTTCGCCCATGTCGACTGA
TAACT
BS08227.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:04:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15736-PA | 423 | Chrac-16-RA | 1..423 | 441..19 | 2115 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:18:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chrac-16-RB | 737 | CG15736-RB | 89..511 | 441..19 | 2115 | 100 | Minus |
| Chrac-16-RA | 685 | CG15736-RA | 89..511 | 441..19 | 2115 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:18:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12017451..12017873 | 19..441 | 2115 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 18:18:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 7909..7980 | 234..303 | 111 | 65.3 | Plus |
BS08227.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:37:05 Download gff for
BS08227.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15736-PA | 1..423 | 19..441 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:35:13 Download gff for
BS08227.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15736-PA | 1..423 | 19..441 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:22:41 Download gff for
BS08227.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 89..511 | 19..441 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:36:23 Download gff for
BS08227.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 89..511 | 19..441 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:36:23 Download gff for
BS08227.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12017451..12017873 | 19..441 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:22:41 Download gff for
BS08227.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11911484..11911906 | 19..441 | 100 | | Plus |
BS08227.5prime Sequence
455 bp (454 high quality bases) assembled on 2006-01-10
> BS08227.5prime
GAAGTTATCAGTCGACATGGGCGAACCAAGGAGCCAACCACCCGTGGAGC
GTCCACCGACCGCGGAAACCTTTCTGCCCCTCAGCCGCGTGCGAACGATC
ATGAAGAGCTCCATGGACACGGGCTTGATCACCAACGAGGTGCTCTTCCT
GATGACCAAGTGCACGGAGCTATTCGTTCGCCATTTGGCGGGCGCGGCAT
ACACGGAGGAATTCGGCCAGCGACCGGGCGAAGCGCTCAAGTACGAGCAT
CTCTCCCAGGTGGTCAATAAGAACAAGAATCTGGAGTTTCTGCTGCAGAT
CGTGCCGCAAAAGATCCGTGTACACCAGTTCCAGGAGATGCTGCGGCTAA
ATCGCTCCGCCGGCAGCGACGACGACGATGACGACGACGATGATGACGAT
GAAGAAGAGTCCGAATCGGAATCGGAGTCTGATGAATAGCGAAGCTTTCT
AGACC
BS08227.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:04:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15736-PA | 423 | Chrac-16-RA | 1..423 | 17..439 | 2115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:27:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chrac-16-RB | 737 | CG15736-RB | 89..511 | 17..439 | 2115 | 100 | Plus |
| Chrac-16-RA | 685 | CG15736-RA | 89..511 | 17..439 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:27:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12017451..12017873 | 439..17 | 2115 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 21:27:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 7909..7980 | 224..155 | 111 | 65.3 | Minus |
BS08227.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:37:06 Download gff for
BS08227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15736-PA | 1..423 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:35:15 Download gff for
BS08227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15736-PA | 1..423 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 02:40:04 Download gff for
BS08227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 89..511 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:28 Download gff for
BS08227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 89..511 | 17..439 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:28 Download gff for
BS08227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12017451..12017873 | 17..439 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 02:40:04 Download gff for
BS08227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11911484..11911906 | 17..439 | 100 | | Minus |
BS08227.complete Sequence
457 bp (457 high quality bases) assembled on 2006-01-18
GenBank Submission: FJ636132
> BS08227.complete
GAAGTTATCAGTCGACATGGGCGAACCAAGGAGCCAACCACCCGTGGAGC
GTCCACCGACCGCGGAAACCTTTCTGCCCCTCAGCCGCGTGCGAACGATC
ATGAAGAGCTCCATGGACACGGGCTTGATCACCAACGAGGTGCTCTTCCT
GATGACCAAGTGCACGGAGCTATTCGTTCGCCATTTGGCGGGCGCGGCAT
ACACGGAGGAATTCGGCCAGCGACCGGGCGAAGCGCTCAAGTACGAGCAT
CTCTCCCAGGTGGTCAATAAGAACAAGAATCTGGAGTTTCTGCTGCAGAT
CGTGCCGCAAAAGATCCGTGTACACCAGTTCCAGGAGATGCTGCGGCTAA
ATCGCTCCGCCGGCAGCGACGACGACGATGACGACGACGATGATGACGAT
GAAGAAGAGTCCGAATCGGAATCGGAGTCTGATGAATAGCGAAGCTTTCT
AGACCAT
BS08227.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:23:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chrac-16-RB | 423 | CG15736-PB | 1..423 | 17..439 | 2115 | 100 | Plus |
| Chrac-16-RA | 423 | CG15736-PA | 1..423 | 17..439 | 2115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:24:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chrac-16-RB | 737 | CG15736-RB | 89..511 | 17..439 | 2115 | 100 | Plus |
| Chrac-16-RA | 685 | CG15736-RA | 89..511 | 17..439 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:23:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12017451..12017873 | 439..17 | 2115 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 10:23:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 7909..7980 | 224..155 | 111 | 65.3 | Minus |
BS08227.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:03:44 Download gff for
BS08227.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 1..423 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:56:22 Download gff for
BS08227.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 84..506 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:18:12 Download gff for
BS08227.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 89..514 | 17..441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:03:45 Download gff for
BS08227.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 84..506 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:20:44 Download gff for
BS08227.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 89..514 | 17..441 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:20:44 Download gff for
BS08227.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12017448..12017873 | 17..441 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:18:12 Download gff for
BS08227.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11911481..11911906 | 17..441 | 99 | | Minus |
BS08227.pep Sequence
Translation from 16 to 438
> BS08227.pep
MGEPRSQPPVERPPTAETFLPLSRVRTIMKSSMDTGLITNEVLFLMTKCT
ELFVRHLAGAAYTEEFGQRPGEALKYEHLSQVVNKNKNLEFLLQIVPQKI
RVHQFQEMLRLNRSAGSDDDDDDDDDDDEEESESESESDE*
BS08227.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:19:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chrac-16-PB | 140 | CG15736-PB | 1..140 | 1..140 | 720 | 100 | Plus |
| Chrac-16-PA | 140 | CG15736-PA | 1..140 | 1..140 | 720 | 100 | Plus |
