Clone BS08244 Report

Search the DGRC for BS08244

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:82
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG32772-RC
Protein status:BS08244.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS08244.3prime Sequence

888 bp (758 high quality bases) assembled on 2006-01-10

> BS08244.3prime
ATGGTCTAGAAAGCTTCTACTTAGTGGGTATGAAACGCGCCTTGACCGCC
TGTCCCATCGGCAAGTGCAGCAGTTGCTGCTGCTGCGCCGCCTGCTGCTG
TTGTTGCGCCGCCTGCTGCTGCTGTTGTTGTGCCGCCTGCTGCTGCGCCT
GCTGCTGTGCCGCCTGCTGCTGCATGTGCTGATTGATCTGCTGCTGGATG
GACAGGCCGCTGACATTGCTGATATGCTGGCTGTGGAGCGATTCGTTGAT
CTCGATCTTGATGGCCGTGGCGGCCAGCGTTGTCGCCTTGTTCTTGTTCT
TCGGCGGACGCCCACGTTGCCCTGTCGTGTGCTGCAGTGACAACGGCTGG
CCGATCATCGCCAGCGGCTGTTGCGACGTCTGCAGCGTGCCCGCCTTCTT
GGATCGCTTCGGAGGCGGCAGCTCGTGGTGGGCGTGATTGGTGAGCAGGT
GCTTGGAGAGGTGCTGGCGCACCGCAAAGGACTCGGCACAATTGGCCACC
GGACAGGAGAGGTAGCGACCCTCGACATGGCGCTGCACGTGCTTCTTCAG
CAGCGACTCCTGATTGAAGCTACTCGGGCAGATGTCGCACTTGAACTTGA
ACTCGTCGTGCATCTTGAGGTGCTGGTCGAGATGGGCCTGCTGCAGGAAC
TTCTCGTCGCACTTGTCGCACTCGTACGGAAAGGCCAGGCCGTGGGTCTT
CATGTGCGTATGCAGCTGCGACTGCAGTTTGAAGTTCTTCTCCGGACAAC
GCGGACAGTAGTAGCCGGTGACCCCAGCGTGCGCCTGCAGGTGCTGGTTC
AGCGAGGTCACCTGCGTGAACTTCTTGTTGCACACGTTGCAGCAATACTG
CTGCACCTTGTGGTGCGACTTCATATGGTTGTTCAGGT

BS08244.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:04:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG32772-PA 1632 CG32772-RA 761..1632 888..17 4335 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:24:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG32772-RF 2345 CG32772-RF 457..1328 888..17 4345 99.9 Minus
CG32772-RE 3105 CG32772-RE 1217..2088 888..17 4345 99.9 Minus
CG32772-RD 2145 CG32772-RD 457..1328 888..17 4345 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:24:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4913211..4913785 888..314 2860 99.8 Minus
X 23542271 X 4913846..4914144 315..17 1495 100 Minus
Blast to na_te.dros performed 2015-02-11 17:24:42
Subject Length Description Subject Range Query Range Score Percent Strand
TART-A 13424 TART-A 13424bp 11499..11651 231..84 139 60 Minus
TART-A 13424 TART-A 13424bp 321..473 231..84 139 60 Minus

BS08244.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:37:25 Download gff for BS08244.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32772-PA 761..1632 17..888 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:35:40 Download gff for BS08244.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32772-PA 761..1632 17..888 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:26:55 Download gff for BS08244.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32772-RD 457..1331 12..888 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:13:22 Download gff for BS08244.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32772-RD 457..1331 12..888 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:13:22 Download gff for BS08244.3prime
Subject Subject Range Query Range Percent Splice Strand
X 4913211..4913783 316..888 99 -> Minus
X 4913846..4914147 12..315 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:26:55 Download gff for BS08244.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 4807244..4807816 316..888 99 -> Minus
arm_X 4807879..4808180 12..315 99   Minus

BS08244.5prime Sequence

851 bp (839 high quality bases) assembled on 2006-01-10

> BS08244.5prime
GAAGTTATCAGTCGACATGGACACCATCTGTAGATTGTGCTTCCAAACGG
CAACGTTGTTCCAGGTGCCCGGCTATAGCATACCCACGTGCGTCCGCTGC
TCGGAGCAGTTGACAAATAATTCCAACTTCCATCAGTCGGCGGCGGCCGC
TGCAGCCGTCGCTGCCTCTGCCTCGGCCGCAGTTGCCGCCTCTGCAGCAG
CGGCGGCCACCTCCTCGTCGACGGCCTCCTCCAGCGACAGCGACGCCATC
GCGCAGCAGCAGCAGCATCAGAATCCGCAGCAGCAGCAGCATCAGAACTC
GCAACAGCAACAACAACAACAGCAGCAAATGCAATCATCCAGTTCTTCCG
AGAACCTACAGTCGCAGGACGACTCCGAAGACGTGGATCTGATATTCAAC
GAGGAGGGCTCCTGCCCGCTATGCAACAAAACTTTCTCGCGCAAATCCTC
GCTCATGACGCACATACGAAATCACTCGGCGGAGCGTAAGTTTGTGTGCA
CCTACTGCCACAAAGGCTTCACGCAGGCGGCCAACTTGCGGAACCACGAA
CGCATCCACACGAACGATCGGCCATATCAGTGCGTGGACTGTGGCAAGAC
CTTCACGCAGATCACCAATTTGAACAATCACCGCCGGCTGCACACCGGCG
AACGGCCCTTCGTTTGCAATGAACCGGAGTGCGGTCGCAGCTTCGCCCAG
GTGACGAACCTGAACAACCATATGAAGTCGCACCACAAGGTGCAGCAGTA
CTGCTGCAACGTGTGCAACAAGAAGTTCACGCAGGTGACCTCGCTGAACC
AGCACCTGCANGCGCACGCTGGGGTCACCGGCTACTACTGTCCGCGTTGT
C

BS08244.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:04:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG32772-PA 1632 CG32772-RA 1..500 17..516 2500 100 Plus
CG32772-PA 1632 CG32772-RA 567..904 514..851 1671 99.7 Plus
CG3849-PB 1974 Lasp-RB 810..837 301..328 140 100 Plus
CG12254-PA 2592 MED25-RA 2088..2115 301..328 140 100 Plus
CG14441-PA 3378 CG14441-RA 2850..2876 301..327 135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:36:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32772-RE 3105 CG32772-RE 526..1360 17..851 4164 99.9 Plus
CG32772-RC 3037 CG32772-RC 658..1492 17..851 4164 99.9 Plus
CG32772-RF 2345 CG32772-RF 131..600 382..851 2339 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:36:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4910851..4911180 55..384 1650 100 Plus
X 23542271 X 4912943..4913131 514..702 945 100 Plus
X 23542271 X 4913201..4913354 698..851 759 99.4 Plus
X 23542271 X 4912743..4912876 383..516 670 100 Plus
X 23542271 X 4909759..4909797 17..55 195 100 Plus
X 23542271 X 3291222..3291268 155..201 190 93.6 Plus
Blast to na_te.dros performed on 2015-02-11 12:36:36 has no hits.

BS08244.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:37:26 Download gff for BS08244.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32772-PA 1..499 17..515 100   Plus
CG32772-PA 569..904 516..851 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:35:41 Download gff for BS08244.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32772-PA 1..499 17..515 100 -> Plus
CG32772-PA 569..904 516..851 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:25:39 Download gff for BS08244.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32772-RC 658..1492 17..851 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:59:22 Download gff for BS08244.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32772-RC 658..1492 17..851 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:59:22 Download gff for BS08244.5prime
Subject Subject Range Query Range Percent Splice Strand
X 4909759..4909797 17..55 100 -> Plus
X 4910852..4911178 56..382 100 -> Plus
X 4912743..4912875 383..515 100 -> Plus
X 4912945..4913129 516..700 100 -> Plus
X 4913204..4913354 701..851 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:25:39 Download gff for BS08244.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 4806776..4806908 383..515 100 -> Plus
arm_X 4806978..4807162 516..700 100 -> Plus
arm_X 4803792..4803830 17..55 100 -> Plus
arm_X 4804885..4805211 56..382 100 -> Plus
arm_X 4807237..4807387 701..851 99   Plus

BS08244.complete Sequence

1595 bp (1595 high quality bases) assembled on 2006-01-18

GenBank Submission: KX803078

> BS08244.complete
GAAGTTATCAGTCGACATGGACACCATCTGTAGATTGTGCTTCCAAACGG
CAACGTTGTTCCAGGTGCCCGGCTATAGCATACCCACGTGCGTCCGCTGC
TCGGAGCAGTTGACAAATAATTCCAACTTCCATCAGTCGGCGGCGGCCGC
TGCAGCCGTCGCTGCCTCTGCCTCGGCCGCAGTTGCCGCCTCTGCAGCAG
CGGCGGCCACCTCCTCGTCGACGGCCTCCTCCAGCGACAGCGACGCCATC
GCGCAGCAGCAGCAGCATCAGAATCCGCAGCAGCAGCAGCATCAGAACTC
GCAACAGCAACAACAACAACAGCAGCAAATGCAATCATCCAGTTCTTCCG
AGAACCTACAGTCGCAGGACGACTCCGAAGACGTGGATCTGATATTCAAC
GAGGAGGGCTCCTGCCCGCTATGCAACAAAACTTTCTCGCGCAAATCCTC
GCTCATGACGCACATACGAAATCACTCGGCGGAGCGTAAGTTTGTGTGCA
CCTACTGCCACAAAGGCTTCACGCAGGCGGCCAACTTGCGGAACCACGAA
CGCATCCACACGAACGATCGGCCATATCAGTGCGTGGACTGTGGCAAGAC
CTTCACGCAGATCACCAATTTGAACAATCACCGCCGGCTGCACACCGGCG
AACGGCCCTTCGTTTGCAATGAACCGGAGTGCGGTCGCAGCTTCGCCCAG
GTGACGAACCTGAACAACCATATGAAGTCGCACCACAAGGTGCAGCAGTA
CTGCTGCAACGTGTGCAACAAGAAGTTCACGCAGGTGACCTCGCTGAACC
AGCACCTGCAGGCGCACGCTGGGGTCACCGGCTACTACTGTCCGCGTTGT
CCGGAGAAGAACTTCAAACTGCAGTCGCAGCTGCATACGCACATGAAGAC
CCACGGCCTGGCCTTTCCGTACGAGTGCGACAAGTGCGACGAGAAGTTCC
TGCAGCAGGCCCATCTCGACCAGCACCTCAAGATGCACGACGAGTTCAAG
TTCAAGTGCGACATCTGCCCGAGTAGCTTCAATCAGGAGTCGCTGCTGAA
GAAGCACGTGCAGCGCCATGTCGAGGGTCGCTACCTCTCCTGTCCGGTGG
CCAATTGTGCCGAGTCCTTTGCGGTGCGCCAGCACCTCTCCAAGCACCTG
CTCACCAATCACGCCCACCACGAGCTGCCGCCTCCGAAGCGATCCAAGAA
GGCGGGCACGCTGCAGACGTCGCAACAGCCGCTGGCGATGATCGGCCAGC
CGTTGTCACTGCAGCACACGACAGGGCAACGTGGGCGTCCGCCGAAGAAC
AAGAACAAGGCGACAACGCTGGCCGCCACGGCCATCAAGATCGAGATCAA
CGAATCGCTCCACAGCCAGCATATCAGCAATGTCAGCGGCCTGTCCATCC
AGCAGCAGATCAATCAGCACATGCAGCAGCAGGCGGCACAGCAGCAGGCG
CAGCAGCAGGCGGCACAACAACAGCAGCAGCAGGCGGCGCAACAACAGCA
GCAGGCGGCGCAGCAGCAGCAACTGCTGCACTTGCCGATGGGACAGGCGG
TCAAGGCGCGTTTCATACCCACTAAGTAGAAGCTTTCTAGACCAT

BS08244.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:21:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG32772-RE 1563 CG32772-PE 1..1563 17..1579 7815 100 Plus
CG32772-RC 1563 CG32772-PC 1..1563 17..1579 7815 100 Plus
CG32772-RF 1125 CG32772-PF 1..1125 455..1579 5625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:21:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG32772-RE 3105 CG32772-RE 526..2088 17..1579 7815 100 Plus
CG32772-RC 3037 CG32772-RC 658..2220 17..1579 7815 100 Plus
CG32772-RF 2345 CG32772-RF 131..1328 382..1579 5990 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:21:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4913201..4913785 698..1282 2925 100 Plus
X 23542271 X 4910851..4911180 55..384 1650 100 Plus
X 23542271 X 4913846..4914144 1281..1579 1495 100 Plus
X 23542271 X 4912943..4913131 514..702 945 100 Plus
X 23542271 X 4912743..4912876 383..516 670 100 Plus
X 23542271 X 4909759..4909797 17..55 195 100 Plus
X 23542271 X 3291222..3291268 155..201 190 93.6 Plus
Blast to na_te.dros performed 2014-11-28 00:21:40
Subject Length Description Subject Range Query Range Score Percent Strand
TART-A 13424 TART-A 13424bp 321..473 1365..1512 139 60 Plus
TART-A 13424 TART-A 13424bp 11499..11651 1365..1512 139 60 Plus

BS08244.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:03:50 Download gff for BS08244.complete
Subject Subject Range Query Range Percent Splice Strand
CG32772-RB 40..172 383..515 100 -> Plus
CG32772-RB 242..1305 516..1579 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:41:50 Download gff for BS08244.complete
Subject Subject Range Query Range Percent Splice Strand
CG32772-RB 651..783 383..515 100 -> Plus
CG32772-RB 853..1919 516..1584 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:50:44 Download gff for BS08244.complete
Subject Subject Range Query Range Percent Splice Strand
CG32772-RC 658..2220 17..1579 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:03:51 Download gff for BS08244.complete
Subject Subject Range Query Range Percent Splice Strand
CG32772-RB 651..783 383..515 100 -> Plus
CG32772-RB 853..1919 516..1584 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:19:04 Download gff for BS08244.complete
Subject Subject Range Query Range Percent Splice Strand
CG32772-RC 658..2220 17..1579 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:19:04 Download gff for BS08244.complete
Subject Subject Range Query Range Percent Splice Strand
X 4912743..4912875 383..515 100 -> Plus
X 4912945..4913129 516..700 100 -> Plus
X 4910852..4911178 56..382 100 -> Plus
X 4909759..4909797 17..55 100 -> Plus
X 4913204..4913783 701..1280 100 -> Plus
X 4913846..4914144 1281..1579 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:50:44 Download gff for BS08244.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4803792..4803830 17..55 100 -> Plus
arm_X 4804885..4805211 56..382 100 -> Plus
arm_X 4806776..4806908 383..515 100 -> Plus
arm_X 4806978..4807162 516..700 100 -> Plus
arm_X 4807237..4807816 701..1280 100 -> Plus
arm_X 4807879..4808177 1281..1579 100   Plus

BS08244.pep Sequence

Translation from 16 to 1578

> BS08244.pep
MDTICRLCFQTATLFQVPGYSIPTCVRCSEQLTNNSNFHQSAAAAAAVAA
SASAAVAASAAAAATSSSTASSSDSDAIAQQQQHQNPQQQQHQNSQQQQQ
QQQQMQSSSSSENLQSQDDSEDVDLIFNEEGSCPLCNKTFSRKSSLMTHI
RNHSAERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVDCGKTFTQIT
NLNNHRRLHTGERPFVCNEPECGRSFAQVTNLNNHMKSHHKVQQYCCNVC
NKKFTQVTSLNQHLQAHAGVTGYYCPRCPEKNFKLQSQLHTHMKTHGLAF
PYECDKCDEKFLQQAHLDQHLKMHDEFKFKCDICPSSFNQESLLKKHVQR
HVEGRYLSCPVANCAESFAVRQHLSKHLLTNHAHHELPPPKRSKKAGTLQ
TSQQPLAMIGQPLSLQHTTGQRGRPPKNKNKATTLAATAIKIEINESLHS
QHISNVSGLSIQQQINQHMQQQAAQQQAQQQAAQQQQQQAAQQQQQAAQQ
QQLLHLPMGQAVKARFIPTK*

BS08244.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:19:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG32772-PE 520 CG32772-PE 1..520 1..520 2762 100 Plus
CG32772-PC 520 CG32772-PC 1..520 1..520 2762 100 Plus
CG32772-PF 374 CG32772-PF 1..374 147..520 2031 100 Plus
CG32772-PD 374 CG32772-PD 1..374 147..520 2031 100 Plus
crol-PC 756 CG14938-PC 97..678 16..511 557 29.7 Plus