Clone BS08267 Report

Search the DGRC for BS08267

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:82
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG8319-RA
Protein status:BS08267.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS08267.3prime Sequence

924 bp (824 high quality bases) assembled on 2006-01-10

> BS08267.3prime
ATGGTCTAGAAAGCTTTCACTTTAGCTTTAGCTTTTGATCTCCATCCCGA
TGCTTGCCCAGAAAGTGCCGCTTCAGATGATGTTTCTCCCGGAAGTCCTG
CAGGCAGATGGAACACTTGTAGGGCCGTTCATCCGAGTGGCGTCGTCGGT
GCTTCGCCAGGTTATTGTTGTCCGAAAAAGTCTTGGGGCAGTGGGGGCAT
TGGTAGGGCTTCTCGCCCGTGTGTATGCGGATGTGGACCTTAAGGGCCTG
CTTGGAACGGAAGTTGGACACGCAGAAGGGACAGGCATGCGGCCGTTCGC
CCATGTGCGCATGGATGTGCACCTTGAGGGCCGACTTGTTGAAGAATCCC
GTTTGGCAGTATGAACATTTGTGGGGTCCGTTTCCCTGTTTCGATTCCGC
GTGGATCAACAGGTGCGCCTTGAGGTTTTGTTCGCGAGTAAAGGCCTGCT
GACAGTGGGGGCACTGAAAGGGCGAACGCTCCTGCATATCCTTGCATTTG
TGGCTGTCCAGGCTCTGGGTGCTTGAAAAGACCTTTAAGCATTCCGGGCA
CTCGACGGTGGAATTGCTATTGCGATAACATTGGTGGTTATCCAGATCGG
CCTTGAACAGAAAACGCTCTTCGCAGTTTTGGCATACGTGTGAATTGCTG
TGAACCTTCATGTGGTCCAGGAGGTTTATTTGGCGCTTGAACTGTTTGAT
GCATAGTTCGCATTTGAAAGTCTGATTCTTTATACTCCTTAGCTGTCTGC
CAGCTCTACTGGTTGTTATGGAAGACTTGGTTGTTCTGGAAGCTGTTTGA
TGTGTCTTTTAATTTCCTTGTTGAGTTTCTTCTTTGCTTCCAGATTGCCT
TTGTCTGGGGTCTCAATGAATAGGAAATCCTCCTCGTTGGGCTCGTCCTT
GATGACCTGCCCATTTATATCGCC

BS08267.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG8319-PA 1152 CG8319-RA 359..1152 810..17 3970 100 Minus
CG8319-PA 1152 CG8319-RA 251..361 917..807 530 99 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 11:01:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG8319-RA 1295 CG8319-RA 320..1229 924..17 4485 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 11:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9627971..9628610 656..17 3200 100 Minus
3R 32079331 3R 9627648..9627910 917..656 1250 99.2 Minus
Blast to na_te.dros performed on 2015-02-06 11:01:42 has no hits.

BS08267.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:38:05 Download gff for BS08267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8319-PA 243..1152 17..924 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:36:30 Download gff for BS08267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8319-PA 243..1152 17..924 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 08:32:09 Download gff for BS08267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8319-RA 320..1235 11..924 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 13:41:54 Download gff for BS08267.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8319-RA 320..1235 11..924 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 13:41:54 Download gff for BS08267.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 9627640..9627909 657..924 98 -> Minus
3R 9627971..9628616 11..656 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 08:32:09 Download gff for BS08267.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5453362..5453631 657..924 98 -> Minus
arm_3R 5453693..5454338 11..656 99   Minus

BS08267.5prime Sequence

849 bp (761 high quality bases) assembled on 2006-01-10

> BS08267.5prime
GAAGTTATCAGTCGACATGGAGGACCTGTGTCGAATTTGTGGCGGGGCCT
CGGAAAACATGCTGGGCATTTTCGACGATCAGGTGGAAGAATATGTTGAT
GGAGCCAAGCTCGCTGAGATGGTGAAGACATGTGCCGACGTGCAGTTGGA
TCCCGACGACGCTATGCCCCAAAAAATGTGCATTTCCTGTGTCCACGATG
CACGAACTGCTTACGGATTCAAGCGAAGATGCGAAGAGAACTACAAGAAG
TTCTATTTGGCGATATTAAATGGGCAGGTCATCAAGGACGAGCCCAACGA
GGAGGATTTCCTATTCATTGAGAACCCAGACAAAGGCAATCTGGAAGCAA
AGAAGAAACTCAACAAGGAAATTAAAAAGACACATCAAACAGCTTCCAGA
ACAACCAAGTCTTCCATAACAACCAGTAGAGCTGGCAGACAGCTAAGGAG
TATAAAGAATCAGACTTTCAAATGCGAACTATGCATCAAACAGTTCAAGC
GCCAAATAAACCTCCTGGACCACATGAAGGTTCACAGCAATTCACACGTA
TGCCAAAACTGCGAAGAGCGTTTTCTGTTCAAGGCCGATCTGGATAACCA
CCAATGTTATCGCAATAGCAATTCCACCGTCGAGTGCCCGGAATGCTTAA
AGGTCTTTTCAAGCACCCAGAGCCTGGACAGCCACAAATGCAAGGATATG
CAGGAGCGTTCGCCCTTTCAGTGCCCCCACTGTCAGCAGGCCTTTACTCG
CGAACAAAACCTCAAGGCGCACCTGTTGATCCACGCGGAATCGAAACAGG
GAAACGGACCCCACAAATGTTCATACTGCCAAACGGGATTCTTCAACAA

BS08267.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:05:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG8319-PA 1152 CG8319-RA 1..833 17..849 4165 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:49:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG8319-RA 1295 CG8319-RA 78..910 17..849 4165 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:49:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9627398..9627910 17..529 2565 100 Plus
3R 32079331 3R 9627971..9628291 529..849 1605 100 Plus
Blast to na_te.dros performed on 2015-02-12 01:49:44 has no hits.

BS08267.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:38:06 Download gff for BS08267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8319-PA 1..831 17..847 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:36:31 Download gff for BS08267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8319-PA 1..831 17..847 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:51:44 Download gff for BS08267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8319-RA 69..908 3..847 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:53:30 Download gff for BS08267.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8319-RA 69..908 3..847 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:53:30 Download gff for BS08267.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 9627389..9627909 3..528 99 -> Plus
3R 9627971..9628289 529..847 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:51:44 Download gff for BS08267.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5453111..5453631 3..528 99 -> Plus
arm_3R 5453693..5454011 529..847 100   Plus

BS08267.complete Sequence

1184 bp (1184 high quality bases) assembled on 2006-01-18

GenBank Submission: FJ636136

> BS08267.complete
GAAGTTATCAGTCGACATGGAGGACCTGTGTCGAATTTGTGGCGGGGCCT
CGGAAAACATGCTGGGCATTTTCGACGATCAGGTGGAAGAATATGTTGAT
GGAGCCAAGCTCGCTGAGATGGTGAAGACATGTGCCGACGTGCAGTTGGA
TCCCGACGACGCTATGCCCCAAAAAATGTGCATTTCCTGTGTCCACGATG
CACGAACTGCTTACGGATTCAAGCGAAGATGCGAAGAGAACTACAAGAAG
TTCTATTTGGCGATATTAAATGGGCAGGTCATCAAGGACGAGCCCAACGA
GGAGGATTTCCTATTCATTGAGAACCCAGACAAAGGCAATCTGGAAGCAA
AGAAGAAACTCAACAAGGAAATTAAAAAGACACATCAAACAGCTTCCAGA
ACAACCAAGTCTTCCATAACAACCAGTAGAGCTGGCAGACAGCTAAGGAG
TATAAAGAATCAGACTTTCAAATGCGAACTATGCATCAAACAGTTCAAGC
GCCAAATAAACCTCCTGGACCACATGAAGGTTCACAGCAATTCACACGTA
TGCCAAAACTGCGAAGAGCGTTTTCTGTTCAAGGCCGATCTGGATAACCA
CCAATGTTATCGCAATAGCAATTCCACCGTCGAGTGCCCGGAATGCTTAA
AGGTCTTTTCAAGCACCCAGAGCCTGGACAGCCACAAATGCAAGGATATG
CAGGAGCGTTCGCCCTTTCAGTGCCCCCACTGTCAGCAGGCCTTTACTCG
CGAACAAAACCTCAAGGCGCACCTGTTGATCCACGCGGAATCGAAACAGG
GAAACGGACCCCACAAATGTTCATACTGCCAAACGGGATTCTTCAACAAG
TCGGCCCTCAAGGTGCACATCCATGCGCACATGGGCGAACGGCCGCATGC
CTGTCCCTTCTGCGTGTCCAACTTCCGTTCCAAGCAGGCCCTTAAGGTCC
ACATCCGCATACACACGGGCGAGAAGCCCTACCAATGCCCCCACTGCCCC
AAGACTTTTTCGGACAACAATAACCTGGCGAAGCACCGACGACGCCACTC
GGATGAACGGCCCTACAAGTGTTCCATCTGCCTGCAGGACTTCCGGGAGA
AACATCATCTGAAGCGGCACTTTCTGGGCAAGCATCGGGATGGAGATCAA
AAGCTAAAGCTAAAGTGAAAGCTTTCTAGACCAT

BS08267.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:39:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG8319-RA 1152 CG8319-PA 1..1152 17..1168 5760 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG8319-RA 1295 CG8319-RA 78..1229 17..1168 5760 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9627971..9628610 529..1168 3200 100 Plus
3R 32079331 3R 9627398..9627910 17..529 2565 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:39:23 has no hits.

BS08267.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:03:35 Download gff for BS08267.complete
Subject Subject Range Query Range Percent Splice Strand
CG8319-RA 1..1152 17..1168 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:41:35 Download gff for BS08267.complete
Subject Subject Range Query Range Percent Splice Strand
CG8319-RA 69..1235 3..1174 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:41:08 Download gff for BS08267.complete
Subject Subject Range Query Range Percent Splice Strand
CG8319-RA 78..1228 17..1167 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:03:35 Download gff for BS08267.complete
Subject Subject Range Query Range Percent Splice Strand
CG8319-RA 69..1235 3..1174 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:46 Download gff for BS08267.complete
Subject Subject Range Query Range Percent Splice Strand
CG8319-RA 78..1228 17..1167 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:46 Download gff for BS08267.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9627398..9627909 17..528 100 -> Plus
3R 9627971..9628609 529..1167 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:41:08 Download gff for BS08267.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5453120..5453631 17..528 100 -> Plus
arm_3R 5453693..5454331 529..1167 100   Plus

BS08267.pep Sequence

Translation from 16 to 1167

> BS08267.pep
MEDLCRICGGASENMLGIFDDQVEEYVDGAKLAEMVKTCADVQLDPDDAM
PQKMCISCVHDARTAYGFKRRCEENYKKFYLAILNGQVIKDEPNEEDFLF
IENPDKGNLEAKKKLNKEIKKTHQTASRTTKSSITTSRAGRQLRSIKNQT
FKCELCIKQFKRQINLLDHMKVHSNSHVCQNCEERFLFKADLDNHQCYRN
SNSTVECPECLKVFSSTQSLDSHKCKDMQERSPFQCPHCQQAFTREQNLK
AHLLIHAESKQGNGPHKCSYCQTGFFNKSALKVHIHAHMGERPHACPFCV
SNFRSKQALKVHIRIHTGEKPYQCPHCPKTFSDNNNLAKHRRRHSDERPY
KCSICLQDFREKHHLKRHFLGKHRDGDQKLKLK*

BS08267.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:20:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG8319-PA 383 CG8319-PA 1..383 1..383 2103 100 Plus
CG15436-PA 346 CG15436-PA 1..346 1..374 505 29.8 Plus
crol-PC 756 CG14938-PC 202..430 143..373 448 36.3 Plus
crol-PB 891 CG14938-PB 408..636 143..373 448 36.3 Plus
crol-PH 686 CG14938-PH 202..431 143..373 446 36.2 Plus
crol-PC 756 CG14938-PC 255..521 115..375 383 32.4 Plus
crol-PH 686 CG14938-PH 183..370 177..368 376 35.9 Plus
crol-PH 686 CG14938-PH 237..485 124..364 364 31.9 Plus
crol-PC 756 CG14938-PC 180..313 231..368 296 39.1 Plus
crol-PC 756 CG14938-PC 179..285 262..368 241 38.3 Plus
crol-PH 686 CG14938-PH 179..286 262..368 229 38 Plus
crol-PH 686 CG14938-PH 312..481 115..278 178 25.3 Plus