Clone Sequence Records
BS08325.3prime Sequence
443 bp (442 high quality bases) assembled on 2006-01-10
> BS08325.3prime
ATGGTCTAGAAAGCTTCGTCATTTGAGCTTGCCTTCGGTGCCCACATACT
TGATCTCATCGAAGGCCTTTCGTGCCTTTTTCAACTCCTCGTTCATGGTC
AGAAGATCCTTCACCCTAGCGTACTTTCGGGGATCTTTGCGCACCAGGAA
GATAATGTCTTCGACTTGAACACGGCCTGTTCGACCGATCTCCATTGCCC
GGTGAGTGGTCTCAGCTATATACTCAATGACCAGGTCTTCCAACAGATCT
ACGGTTTCCGTGTATGGATTTTTGTCGTCTCCGAATCCGAACATCATGCA
GCGCAGCTCCTTGCTGAATAGGCGCTTTCGTCCTGAGTTGGTAGCCACAA
ATTGGTCATCCTCCGCGTCGTCATCAAAGTTGAAATCACCGCCCTCGAAA
TTCTCCTCTGGCATGCTATTTGAGGCCATGTCGACTGATAACT
BS08325.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:05:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10756-PA | 411 | Taf13-RA | 1..411 | 429..19 | 2030 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:34:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf13-RA | 628 | CG10756-RA | 82..493 | 429..18 | 2045 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:34:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20093317..20093660 | 41..384 | 1705 | 99.7 | Plus |
2L | 23513712 | 2L | 20093724..20093768 | 385..429 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 11:34:11 has no hits.
BS08325.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:38:30 Download gff for
BS08325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf13-PA | 1..411 | 19..429 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:37:03 Download gff for
BS08325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10756-PA | 1..411 | 19..429 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 07:53:46 Download gff for
BS08325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf13-RA | 76..500 | 9..436 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:53:57 Download gff for
BS08325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf13-RA | 76..500 | 9..436 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:53:57 Download gff for
BS08325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20093318..20093660 | 42..384 | 99 | <- | Plus |
2L | 20093724..20093774 | 385..436 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 07:53:46 Download gff for
BS08325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20093318..20093660 | 42..384 | 99 | <- | Plus |
arm_2L | 20093724..20093774 | 385..436 | 94 | | Plus |
BS08325.5prime Sequence
443 bp (442 high quality bases) assembled on 2006-01-10
> BS08325.5prime
GAAGTTATCAGTCGACATGGCCTCAAATAGCATGCCAGAGGAGAATTTCG
AGGGCGGTGATTTCAACTTTGATGACGACGCGGAGGATGACCAATTTGTG
GCTACCAACTCAGGACGAAAGCGCCTATTCAGCAAGGAGCTGCGCTGCAT
GATGTTCGGATTCGGAGACGACAAAAATCCATACACGGAAACCGTAGATC
TGTTGGAAGACCTGGTCATTGAGTATATAGCTGAGACCACTCACCGGGCA
ATGGAGATCGGTCGAACAGGCCGTGTTCAAGTCGAAGACATTATCTTCCT
GGTGCGCAAAGATCCCCGAAAGTACGCTAGGGTGAAGGATCTTCTGACCA
TGAACGAGGAGTTGAAAAAGGCACGAAAGGCCTTCGATGAGATCAAGTAT
GTGGGCACCGAAGGCAAGCTCAAATGACGAAGCTTTCTAGACC
BS08325.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:05:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10756-PA | 411 | Taf13-RA | 1..411 | 17..427 | 2030 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 10:04:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf13-RA | 628 | CG10756-RA | 82..493 | 17..428 | 2045 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 10:04:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20093317..20093660 | 405..62 | 1705 | 99.7 | Minus |
2L | 23513712 | 2L | 20093724..20093768 | 61..17 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 10:04:36 has no hits.
BS08325.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:38:31 Download gff for
BS08325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf13-PA | 1..411 | 17..427 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:37:05 Download gff for
BS08325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10756-PA | 1..411 | 17..427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 18:26:30 Download gff for
BS08325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf13-RA | 76..500 | 10..437 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:55:24 Download gff for
BS08325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf13-RA | 76..500 | 10..437 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:55:24 Download gff for
BS08325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20093318..20093660 | 62..404 | 99 | <- | Minus |
2L | 20093724..20093774 | 10..61 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 18:26:30 Download gff for
BS08325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20093318..20093660 | 62..404 | 99 | <- | Minus |
arm_2L | 20093724..20093774 | 10..61 | 94 | | Minus |
BS08325.complete Sequence
445 bp (445 high quality bases) assembled on 2006-01-18
GenBank Submission: FJ636141
> BS08325.complete
GAAGTTATCAGTCGACATGGCCTCAAATAGCATGCCAGAGGAGAATTTCG
AGGGCGGTGATTTCAACTTTGATGACGACGCGGAGGATGACCAATTTGTG
GCTACCAACTCAGGACGAAAGCGCCTATTCAGCAAGGAGCTGCGCTGCAT
GATGTTCGGATTCGGAGACGACAAAAATCCATACACGGAAACCGTAGATC
TGTTGGAAGACCTGGTCATTGAGTATATAGCTGAGACCACTCACCGGGCA
ATGGAGATCGGTCGAACAGGCCGTGTTCAAGTCGAAGACATTATCTTCCT
GGTGCGCAAAGATCCCCGAAAGTACGCTAGGGTGAAGGATCTTCTGACCA
TGAACGAGGAGTTGAAAAAGGCACGAAAGGCCTTCGATGAGATCAAGTAT
GTGGGCACCGAAGGCAAGCTCAAATGACGAAGCTTTCTAGACCAT
BS08325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:23:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf13-RA | 411 | CG10756-PA | 1..411 | 17..427 | 2040 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:23:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf13-RA | 628 | CG10756-RA | 82..493 | 17..428 | 2045 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:23:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20093317..20093660 | 405..62 | 1705 | 99.7 | Minus |
2L | 23513712 | 2L | 20093724..20093768 | 61..17 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:23:51 has no hits.
BS08325.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:44:50 Download gff for
BS08325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf13-RA | 1..411 | 17..427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:32:04 Download gff for
BS08325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf13-RA | 73..497 | 10..437 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:16 Download gff for
BS08325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf13-RA | 82..493 | 17..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:44:50 Download gff for
BS08325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf13-RA | 73..497 | 10..437 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:38 Download gff for
BS08325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf13-RA | 82..493 | 17..429 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:38 Download gff for
BS08325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20093221..20093246 | 405..429 | 96 | <- | Minus |
2L | 20093318..20093660 | 62..404 | 99 | <- | Minus |
2L | 20093724..20093768 | 17..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:16 Download gff for
BS08325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20093221..20093246 | 405..429 | 96 | <- | Minus |
arm_2L | 20093318..20093660 | 62..404 | 99 | <- | Minus |
arm_2L | 20093724..20093768 | 17..61 | 100 | | Minus |
BS08325.pep Sequence
Translation from 16 to 426
> BS08325.pep
MASNSMPEENFEGGDFNFDDDAEDDQFVATNSGRKRLFSKELRCMMFGFG
DDKNPYTETVDLLEDLVIEYIAETTHRAMEIGRTGRVQVEDIIFLVRKDP
RKYARVKDLLTMNEELKKARKAFDEIKYVGTEGKLK*
BS08325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:59:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf13-PA | 136 | CG10756-PA | 1..136 | 1..136 | 703 | 100 | Plus |