Clone Sequence Records
BS08431.3prime Sequence
888 bp (834 high quality bases) assembled on 2006-01-10
> BS08431.3prime
ATGGTCTAGAAAGCTTTTAATCGTCGAAGAATAGTATTTCTAGGATCCGT
TTCTGTGCACTTTTCTTCCGTTCCTTGTTCATTTTCAGCAGTTCCGTGGT
GACTAATTCTCCCAGCAAATGCTCAGACAACCGCTGCACACCCGGATGAT
TGGGCGGCGCCTGGAATTTCCCGAAGTTTGCGGGATGCGAACTGCTGGCC
TGATGTGGGAACTGCTGGTATAACTGGAAAAGGAAGTCCGTGTTTGACGG
AAACATGTTCTGGTGCTGTTGCTGCTGCTGGTTGTTGTGGCTATTATTGC
CGCTGGGATTGTTGCTCCCGCTATTGCTGCTACTGTTATTCCCATTTCCA
TTGCCCCGCTGCATGGGCATCGAATTGCTGTAGTGATTCTCCTGCTGCAT
CATAGCCTGCGGCTCCATCAGATCATGGCTGTTCTCATCGGATTCGTCGT
CCGAGTCATTGCCAAAGTGACTACCATTGCTGGTCATCTGGTTATGGGCA
TTGCCATTTAGTTGAATACGGGGTTTCTTCATATGGAAATGGCTCGATGA
CGAAGAGTCTAGACCATCGCCCTTGGGGTTATAGACATGTGACTGTTGCA
TCTGCAGAGTGGAACTGTTGCCGATGGAAGCGCCCGTGGCGCTGGAAGAG
GAATGTACCACCGGAAGCTGCTGTTCAGATGCCGGCGACTGTTGCTGCGC
TTGTTGCTGCTGCTGCTGCTGTTGTTGTTGCGTCTGCTGCTGAGGATGAT
GGGATCCTGCCCCAATTCCTTGCAGCGGCGACGACAGCGGTGATTTCATC
GAGGATGATGTTGAGGTCAGACTGCCAGCGCTGTTCTGGGCCCCGTTCAT
GCCCACGGAGCCATCCTTGTATTGATCCTGATAACCTT
BS08431.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:06:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-PA | 1521 | CG7745-RA | 650..1521 | 888..17 | 4360 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:43:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-RA | 1893 | CG7745-RA | 718..1590 | 888..16 | 4365 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:43:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11308654..11309526 | 888..16 | 4365 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:43:18 has no hits.
BS08431.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:40:26 Download gff for
BS08431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-PA | 650..1521 | 17..888 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:39:30 Download gff for
BS08431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-PA | 650..1521 | 17..888 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 13:36:53 Download gff for
BS08431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 718..1600 | 7..888 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:58:05 Download gff for
BS08431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 718..1600 | 7..888 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:58:05 Download gff for
BS08431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11308654..11309536 | 7..888 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 13:36:53 Download gff for
BS08431.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7196159..7197041 | 7..888 | 99 | | Minus |
BS08431.5prime Sequence
779 bp (778 high quality bases) assembled on 2006-01-10
> BS08431.5prime
GAAGTTATCAGTCGACATGATGGATGAGCAGCTAATTGACGAGGTAGCGC
AGCACGGAGTGATCTACAACCGGCAGAAGTACTACCTCAACGGCGGCGCC
AATGGTGGCAAGTACGAGACGAAGGACGAGGCCTGGCAGCTGATTGCGAT
GAAGCTGCGCACGGATGTGGACACGTGCAAGAAGCGGTGGAAGTACCTAC
GCGAACGCTACGTGTCGCAGCGGAAGCAGGGCGATCCACCTGTCTACGAA
CACCTGTCGCGTCCATACCTGGAGAAAATGAAGTTCTTGGACCAGCACAT
CCAGCCGCGCAAGTCCTACCGCCATGTGCCGAACTTCCTAACATCTCCAC
AGTCCGCCAACAGCTCCGGCTACAACGAATACCAGGTTGATAAGTCCAAT
GGCTCCATGAAGAATGTGTCTCAGTTTGGCAGCTCAGGGCAAAGTCATCT
TTACCACCAGCCGGATCAGCAACACGCAATGAGTGCTCTGAGTAACGTTG
CTGCATCTGCGCTGGAAAACGTCAATGGCCAGGTGAAGATCGAGGCGGAC
CAGGTGTTCAGGGATTTTGCGGCTGCCGTGGCCTCACAGCAGCTCCAGCA
CATATCACAGTCACAAATGCAGCAACAGGCGGCGGCCGTTGCAGCTGTAA
TGGCTGATTCCTCGCAAGGTTATCAGGATCAATACAAGGATGGCTCCGTG
GGCATGAACGGGGCCCAGAACAGCGCTGGCAGTCTGACCTCAACATCATC
CTCGATGAAATCACCGCTGTCGTCGCCGC
BS08431.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:06:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-PA | 1521 | CG7745-RA | 1..763 | 17..779 | 3815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:46:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-RA | 1893 | CG7745-RA | 69..831 | 17..779 | 3815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:46:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11308155..11308767 | 167..779 | 3065 | 100 | Plus |
| 2R | 25286936 | 2R | 11307947..11308097 | 17..167 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:46:40 has no hits.
BS08431.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:40:27 Download gff for
BS08431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-PA | 1..763 | 17..779 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:39:32 Download gff for
BS08431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-PA | 1..763 | 17..779 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:00:20 Download gff for
BS08431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..831 | 17..779 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:30:49 Download gff for
BS08431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..831 | 17..779 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:30:49 Download gff for
BS08431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11307947..11308097 | 17..167 | 100 | -> | Plus |
| 2R | 11308156..11308767 | 168..779 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:00:20 Download gff for
BS08431.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7195452..7195602 | 17..167 | 100 | -> | Plus |
| arm_2R | 7195661..7196272 | 168..779 | 100 | | Plus |
BS08431.complete Sequence
1553 bp (1553 high quality bases) assembled on 2006-01-18
GenBank Submission: FJ636153
> BS08431.complete
GAAGTTATCAGTCGACATGATGGATGAGCAGCTAATTGACGAGGTAGCGC
AGCACGGAGTGATCTACAACCGGCAGAAGTACTACCTCAACGGCGGCGCC
AATGGTGGCAAGTACGAGACGAAGGACGAGGCCTGGCAGCTGATTGCGAT
GAAGCTGCGCACGGATGTGGACACGTGCAAGAAGCGGTGGAAGTACCTAC
GCGAACGCTACGTGTCGCAGCGGAAGCAGGGCGATCCACCTGTCTACGAA
CACCTGTCGCGTCCATACCTGGAGAAAATGAAGTTCTTGGACCAGCACAT
CCAGCCGCGCAAGTCCTACCGCCATGTGCCGAACTTCCTAACATCTCCAC
AGTCCGCCAACAGCTCCGGCTACAACGAATACCAGGTTGATAAGTCCAAT
GGCTCCATGAAGAATGTGTCTCAGTTTGGCAGCTCAGGGCAAAGTCATCT
TTACCACCAGCCGGATCAGCAACACGCAATGAGTGCTCTGAGTAACGTTG
CTGCATCTGCGCTGGAAAACGTCAATGGCCAGGTGAAGATCGAGGCGGAC
CAGGTGTTCAGGGATTTTGCGGCTGCCGTGGCCTCACAGCAGCTCCAGCA
CATATCACAGTCACAAATGCAGCAACAGGCGGCGGCCGTTGCAGCTGTAA
TGGCTGATTCCTCGCAAGGTTATCAGGATCAATACAAGGATGGCTCCGTG
GGCATGAACGGGGCCCAGAACAGCGCTGGCAGTCTGACCTCAACATCATC
CTCGATGAAATCACCGCTGTCGTCGCCGCTGCAAGGAATTGGGGCAGGAT
CCCATCATCCTCAGCAGCAGACGCAACAACAACAGCAGCAGCAGCAGCAA
CAAGCGCAGCAACAGTCGCCGGCATCTGAACAGCAGCTTCCGGTGGTACA
TTCCTCTTCCAGCGCCACGGGCGCTTCCATCGGCAACAGTTCCACTCTGC
AGATGCAACAGTCACATGTCTATAACCCCAAGGGCGATGGTCTAGACTCT
TCGTCATCGAGCCATTTCCATATGAAGAAACCCCGTATTCAACTAAATGG
CAATGCCCATAACCAGATGACCAGCAATGGTAGTCACTTTGGCAATGACT
CGGACGACGAATCCGATGAGAACAGCCATGATCTGATGGAGCCGCAGGCT
ATGATGCAGCAGGAGAATCACTACAGCAATTCGATGCCCATGCAGCGGGG
CAATGGAAATGGGAATAACAGTAGCAGCAATAGCGGGAGCAACAATCCCA
GCGGCAATAATAGCCACAACAACCAGCAGCAGCAACAGCACCAGAACATG
TTTCCGTCAAACACGGACTTCCTTTTCCAGTTATACCAGCAGTTCCCACA
TCAGGCCAGCAGTTCGCATCCCGCAAACTTCGGGAAATTCCAGGCGCCGC
CCAATCATCCGGGTGTGCAGCGGTTGTCTGAGCATTTGCTGGGAGAATTA
GTCACCACGGAACTGCTGAAAATGAACAAGGAACGGAAGAAAAGTGCACA
GAAACGGATCCTAGAAATACTATTCTTCGACGATTAAAAGCTTTCTAGAC
CAT
BS08431.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:02:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-RA | 1521 | CG7745-PA | 1..1521 | 17..1537 | 7605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:02:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-RA | 1893 | CG7745-RA | 69..1590 | 17..1538 | 7610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:02:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11308155..11309526 | 167..1538 | 6860 | 100 | Plus |
| 2R | 25286936 | 2R | 11307947..11308097 | 17..167 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:02:56 has no hits.
BS08431.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:03:32 Download gff for
BS08431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 1..1521 | 17..1537 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:41:32 Download gff for
BS08431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 64..1595 | 17..1547 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:16:45 Download gff for
BS08431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..1587 | 17..1535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:03:32 Download gff for
BS08431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 64..1595 | 17..1547 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:25:18 Download gff for
BS08431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..1587 | 17..1535 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:25:18 Download gff for
BS08431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11307947..11308097 | 17..167 | 100 | -> | Plus |
| 2R | 11308156..11309523 | 168..1535 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:16:45 Download gff for
BS08431.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7195452..7195602 | 17..167 | 100 | -> | Plus |
| arm_2R | 7195661..7197028 | 168..1535 | 100 | | Plus |
BS08431.pep Sequence
Translation from 16 to 1536
> BS08431.pep
MMDEQLIDEVAQHGVIYNRQKYYLNGGANGGKYETKDEAWQLIAMKLRTD
VDTCKKRWKYLRERYVSQRKQGDPPVYEHLSRPYLEKMKFLDQHIQPRKS
YRHVPNFLTSPQSANSSGYNEYQVDKSNGSMKNVSQFGSSGQSHLYHQPD
QQHAMSALSNVAASALENVNGQVKIEADQVFRDFAAAVASQQLQHISQSQ
MQQQAAAVAAVMADSSQGYQDQYKDGSVGMNGAQNSAGSLTSTSSSMKSP
LSSPLQGIGAGSHHPQQQTQQQQQQQQQQAQQQSPASEQQLPVVHSSSSA
TGASIGNSSTLQMQQSHVYNPKGDGLDSSSSSHFHMKKPRIQLNGNAHNQ
MTSNGSHFGNDSDDESDENSHDLMEPQAMMQQENHYSNSMPMQRGNGNGN
NSSSNSGSNNPSGNNSHNNQQQQQHQNMFPSNTDFLFQLYQQFPHQASSS
HPANFGKFQAPPNHPGVQRLSEHLLGELVTTELLKMNKERKKSAQKRILE
ILFFDD*
BS08431.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:20:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-PA | 506 | CG7745-PA | 1..506 | 1..506 | 2646 | 100 | Plus |
