Clone BS08503 Report

Search the DGRC for BS08503

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:85
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptFK506-bp1-RA
Protein status:BS08503.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS08503.3prime Sequence

910 bp (813 high quality bases) assembled on 2006-01-10

> BS08503.3prime
ATGGTCTAGAAAGCTTCTAATGCACAGCTTTCAGTTCCACTTCGAAGACG
AGAGTGGAGTTCGGTCCGATCTTCGGTGGAGCTCCCCGTGCGCCGTACGC
CATGTGCGGGGGGCAGGTAATGACTCGCTTGCCGCCCACCTTCATGCCGG
CGACTCCCACGTCCCAGCCCTTGATGACCTCTCCGCCGCCCAGGGCGAAC
TTAAATGGTTTTCCCTTCAGGAGGCTGTCGAAGGTCTTGTTGTTCGACTG
CAGGCGGCCGATGTAGTAAACAGATACGCGTTTGCCCTGCTTGGCTTCTT
CGCCTTTGCCGACGACCTGATCCACAATCTTCACGCCTCCGGTGATAGTA
CGTGGATCCTTAGAAGCTGGTTGCTGCTTGGCTGGCTCCTTGGCCTTGGG
TTGTTCCTTCTTGGCCTCTGGCTTCTCCTTCTTCTTTTGCTGCTGCTTGG
CCTCCTCCTTCTTGGCCACACCGTTCTGCTCCTTGCCAGATTTCTTGGCG
CTAGCGCCAGGAGAGAGCTTGGCAACCTTGGCCTTTGGCTGTTCCTCTTC
AGCTTCGGAGTCGTCGCTGTCCTGTTCATCCTCCTCGCCACTCTCCTCGT
TATCCTCATCAACATCGTCGTCATCTTCCTCCTCACCATTTTCGAGGAAG
GACTCGTATTCCTCGATTATCTGGCTATCGTCATCAGTATCCTCCTCGTC
CTCCTCGCCGCTCTCATTCTCATCCTCATCATCTTCAGACTTTTTGCTAT
TCTTGATCGCCTTGGAGTTCAGCAAATTCTCGATCGTCATTTGATCGTCA
TCCTCATCATCTTCGGAAATCATGTCGTGCAAGTAGCCCAACAGAGAAAC
GCTGGCGTCGCCGGCGGTGTAGAACATGATGCGATCGCCCTTGCTGAAGT
TCAGGTCGAG

BS08503.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:08:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG6226-PA 1074 FK506-bp1-RA 273..1074 818..17 4010 100 Minus
CG6226-PA 1074 FK506-bp1-RA 181..269 910..822 445 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:36:02
Subject Length Description Subject Range Query Range Score Percent Strand
FK506-bp1-RA 1299 CG6226-RA 286..1179 910..17 4425 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:35:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15331704..15332549 17..862 4185 99.6 Plus
3R 32079331 3R 15332615..15332664 861..910 250 100 Plus
Blast to na_te.dros performed on 2015-02-11 17:35:59 has no hits.

BS08503.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:42:22 Download gff for BS08503.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6226-PA 181..1074 17..910 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:42:15 Download gff for BS08503.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6226-PA 181..1074 17..910 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:28:50 Download gff for BS08503.3prime
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 286..1182 13..910 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:14:29 Download gff for BS08503.3prime
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 286..1182 13..910 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:14:29 Download gff for BS08503.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 15331701..15332548 13..861 99 <- Plus
3R 15332616..15332664 862..910 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:28:50 Download gff for BS08503.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11157423..11158270 13..861 99 <- Plus
arm_3R 11158338..11158386 862..910 100   Plus

BS08503.5prime Sequence

906 bp (800 high quality bases) assembled on 2006-01-10

> BS08503.5prime
GAAGTTATCAGTCGACATGTCGATGTTTTGGGGTTTGAACATGAAGCCTG
AGCGCAAGTACTCGCAGACGATCATCAAGTCGTTCCACATCTCGGGCGTG
GCACTCGACAAGGGCCAGGAGGCCAAGTTGTACCTCGCTGCCGAGAAGCA
GGAGTACATCGTGGCCACCGTGACCAAGGCCATTCCACAGGTTGCGCTCG
ACCTGAACTTCAGCAAGGGCGATCGCATCATGTTCTACACCGCCGGCGAC
GCCAGCGTTTCTCTGTTGGGCTACTTGCACGACATTGATTCCGAAGATGA
TGAGGATGACGATCAAATGACGATCGAGAATTTGCTGAACTCCAAGGCGA
TCAAGAATAGCAAAAAGTCTGAAGATGATGAGGATGAGAATGAGAGCGGC
GAGGAGGACGAGGAGGATACTGATGACGATAGCCAGATAATCGAGGAATA
CGAGTCCTTCCTCGAAAATGGTGAGGAGGAAGATGACGACGATGTTGATG
AGGATAACGAGGAGAGTGGCGAGGAGGATGAACAGGACAGCGACGACTCC
GAAGCTGAAGAGGAACAGCCAAAGGCCAAGGTTGCCAAGCTCTCTCCTGG
CGCTAGCGCCAAGAAATCTGGCAAGGAGCAGAACGGTGTGGCCAAGAAGG
AGGAGGCCAAGCAGCAGCAAAAGAAGAAGGAGAAGCCAGAGGCCAAGAAG
GAACAACCCAAGGCCAAGGAGCCAGCCAAGCAGCAACCAGCTTCTAAGGA
TCCACGTACTATCACCGGAGGCGTGAAGATTGTGGATCAGGTCGTCGGCA
AAGGCGAAGAAGCCAAGCAGGGCCAACGCGTATCTGTTTACTACATCGGC
CGCCTGCAGTCGAACAACAAGACCTTCGACAGCCTCCTGAAAGGAAAACC
ATTTAA

BS08503.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:08:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG6226-PA 1074 FK506-bp1-RA 1..890 17..906 4400 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:35:27
Subject Length Description Subject Range Query Range Score Percent Strand
FK506-bp1-RA 1299 CG6226-RA 106..995 17..906 4420 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:35:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15331888..15332549 906..245 3280 99.7 Minus
3R 32079331 3R 15332615..15332829 246..32 1075 100 Minus
Blast to na_te.dros performed on 2015-02-11 12:35:26 has no hits.

BS08503.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:42:23 Download gff for BS08503.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6226-PA 1..888 17..904 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:42:16 Download gff for BS08503.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6226-PA 1..888 17..904 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:25:34 Download gff for BS08503.5prime
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 98..995 8..906 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:55:42 Download gff for BS08503.5prime
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 98..995 8..906 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:55:42 Download gff for BS08503.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 15331888..15332548 246..906 99 <- Minus
3R 15332616..15332828 33..245 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:25:34 Download gff for BS08503.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11157610..11158270 246..906 99 <- Minus
arm_3R 11158338..11158550 33..245 100 <- Minus

BS08503.complete Sequence

1106 bp (1106 high quality bases) assembled on 2006-01-18

GenBank Submission: FJ636185

> BS08503.complete
GAAGTTATCAGTCGACATGTCGATGTTTTGGGGTTTGAACATGAAGCCTG
AGCGCAAGTACTCGCAGACGATCATCAAGTCGTTCCACATCTCGGGCGTG
GCACTCGACAAGGGCCAGGAGGCCAAGTTGTACCTCGCTGCCGAGAAGCA
GGAGTACATCGTGGCCACCGTGACCAAGGCCATTCCACAGGTTGCGCTCG
ACCTGAACTTCAGCAAGGGCGATCGCATCATGTTCTACACCGCCGGCGAC
GCCAGCGTTTCTCTGTTGGGCTACTTGCACGACATTGATTCCGAAGATGA
TGAGGATGACGATCAAATGACGATCGAGAATTTGCTGAACTCCAAGGCGA
TCAAGAATAGCAAAAAGTCTGAAGATGATGAGGATGAGAATGAGAGCGGC
GAGGAGGACGAGGAGGATACTGATGACGATAGCCAGATAATCGAGGAATA
CGAGTCCTTCCTCGAAAATGGTGAGGAGGAAGATGACGACGATGTTGATG
AGGATAACGAGGAGAGTGGCGAGGAGGATGAACAGGACAGCGACGACTCC
GAAGCTGAAGAGGAACAGCCAAAGGCCAAGGTTGCCAAGCTCTCTCCTGG
CGCTAGCGCCAAGAAATCTGGCAAGGAGCAGAACGGTGTGGCCAAGAAGG
AGGAGGCCAAGCAGCAGCAAAAGAAGAAGGAGAAGCCAGAGGCCAAGAAG
GAACAACCCAAGGCCAAGGAGCCAGCCAAGCAGCAACCAGCTTCTAAGGA
TCCACGTACTATCACCGGAGGCGTGAAGATTGTGGATCAGGTCGTCGGCA
AAGGCGAAGAAGCCAAGCAGGGCAAACGCGTATCTGTTTACTACATCGGC
CGCCTGCAGTCGAACAACAAGACCTTCGACAGCCTCCTGAAGGGAAAACC
ATTTAAGTTCGCCCTGGGCGGCGGAGAGGTCATCAAGGGCTGGGACGTGG
GAGTCGCCGGCATGAAGGTGGGCGGCAAGCGAGTCATTACCTGCCCCCCG
CACATGGCGTACGGCGCACGGGGAGCTCCACCGAAGATCGGACCGAACTC
CACTCTCGTCTTCGAAGTGGAACTGAAAGCTGTGCATTAGAAGCTTTCTA
GACCAT

BS08503.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
FK506-bp1-RA 1074 CG6226-PA 1..1074 17..1090 5370 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
FK506-bp1-RA 1299 CG6226-RA 106..1179 17..1090 5370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:45:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15331704..15332549 1090..245 4230 100 Minus
3R 32079331 3R 15332615..15332829 246..32 1075 100 Minus
Blast to na_te.dros performed on 2014-11-27 19:45:14 has no hits.

BS08503.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:02:59 Download gff for BS08503.complete
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 1..1074 17..1090 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:40:52 Download gff for BS08503.complete
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 107..1191 8..1094 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:43 Download gff for BS08503.complete
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 106..1179 17..1090 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:02:59 Download gff for BS08503.complete
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 107..1191 8..1094 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:40 Download gff for BS08503.complete
Subject Subject Range Query Range Percent Splice Strand
FK506-bp1-RA 106..1179 17..1090 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:40 Download gff for BS08503.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15331704..15332548 246..1090 100 <- Minus
3R 15332616..15332828 33..245 100 <- Minus
3R 15333013..15333028 17..32 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:43 Download gff for BS08503.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11157426..11158270 246..1090 100 <- Minus
arm_3R 11158338..11158550 33..245 100 <- Minus
arm_3R 11158735..11158750 17..32 100   Minus

BS08503.pep Sequence

Translation from 16 to 1089

> BS08503.pep
MSMFWGLNMKPERKYSQTIIKSFHISGVALDKGQEAKLYLAAEKQEYIVA
TVTKAIPQVALDLNFSKGDRIMFYTAGDASVSLLGYLHDIDSEDDEDDDQ
MTIENLLNSKAIKNSKKSEDDEDENESGEEDEEDTDDDSQIIEEYESFLE
NGEEEDDDDVDEDNEESGEEDEQDSDDSEAEEEQPKAKVAKLSPGASAKK
SGKEQNGVAKKEEAKQQQKKKEKPEAKKEQPKAKEPAKQQPASKDPRTIT
GGVKIVDQVVGKGEEAKQGKRVSVYYIGRLQSNNKTFDSLLKGKPFKFAL
GGGEVIKGWDVGVAGMKVGGKRVITCPPHMAYGARGAPPKIGPNSTLVFE
VELKAVH*

BS08503.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:22:00
Subject Length Description Subject Range Query Range Score Percent Strand
FK506-bp1-PA 357 CG6226-PA 1..357 1..357 1834 100 Plus
FK506-bp2-PA 108 CG11001-PA 2..107 252..356 241 48.1 Plus
Fkbp14-PF 216 CG9847-PF 39..129 264..353 220 47.3 Plus
Fkbp14-PE 216 CG9847-PE 39..129 264..353 220 47.3 Plus
CG14715-PA 138 CG14715-PA 17..126 242..353 216 45.1 Plus