Clone Sequence Records
BS08503.3prime Sequence
910 bp (813 high quality bases) assembled on 2006-01-10
> BS08503.3prime
ATGGTCTAGAAAGCTTCTAATGCACAGCTTTCAGTTCCACTTCGAAGACG
AGAGTGGAGTTCGGTCCGATCTTCGGTGGAGCTCCCCGTGCGCCGTACGC
CATGTGCGGGGGGCAGGTAATGACTCGCTTGCCGCCCACCTTCATGCCGG
CGACTCCCACGTCCCAGCCCTTGATGACCTCTCCGCCGCCCAGGGCGAAC
TTAAATGGTTTTCCCTTCAGGAGGCTGTCGAAGGTCTTGTTGTTCGACTG
CAGGCGGCCGATGTAGTAAACAGATACGCGTTTGCCCTGCTTGGCTTCTT
CGCCTTTGCCGACGACCTGATCCACAATCTTCACGCCTCCGGTGATAGTA
CGTGGATCCTTAGAAGCTGGTTGCTGCTTGGCTGGCTCCTTGGCCTTGGG
TTGTTCCTTCTTGGCCTCTGGCTTCTCCTTCTTCTTTTGCTGCTGCTTGG
CCTCCTCCTTCTTGGCCACACCGTTCTGCTCCTTGCCAGATTTCTTGGCG
CTAGCGCCAGGAGAGAGCTTGGCAACCTTGGCCTTTGGCTGTTCCTCTTC
AGCTTCGGAGTCGTCGCTGTCCTGTTCATCCTCCTCGCCACTCTCCTCGT
TATCCTCATCAACATCGTCGTCATCTTCCTCCTCACCATTTTCGAGGAAG
GACTCGTATTCCTCGATTATCTGGCTATCGTCATCAGTATCCTCCTCGTC
CTCCTCGCCGCTCTCATTCTCATCCTCATCATCTTCAGACTTTTTGCTAT
TCTTGATCGCCTTGGAGTTCAGCAAATTCTCGATCGTCATTTGATCGTCA
TCCTCATCATCTTCGGAAATCATGTCGTGCAAGTAGCCCAACAGAGAAAC
GCTGGCGTCGCCGGCGGTGTAGAACATGATGCGATCGCCCTTGCTGAAGT
TCAGGTCGAG
BS08503.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:08:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6226-PA | 1074 | FK506-bp1-RA | 273..1074 | 818..17 | 4010 | 100 | Minus |
CG6226-PA | 1074 | FK506-bp1-RA | 181..269 | 910..822 | 445 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:36:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FK506-bp1-RA | 1299 | CG6226-RA | 286..1179 | 910..17 | 4425 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:35:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15331704..15332549 | 17..862 | 4185 | 99.6 | Plus |
3R | 32079331 | 3R | 15332615..15332664 | 861..910 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:35:59 has no hits.
BS08503.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:42:22 Download gff for
BS08503.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6226-PA | 181..1074 | 17..910 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:42:15 Download gff for
BS08503.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6226-PA | 181..1074 | 17..910 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:28:50 Download gff for
BS08503.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FK506-bp1-RA | 286..1182 | 13..910 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:14:29 Download gff for
BS08503.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FK506-bp1-RA | 286..1182 | 13..910 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:14:29 Download gff for
BS08503.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15331701..15332548 | 13..861 | 99 | <- | Plus |
3R | 15332616..15332664 | 862..910 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:28:50 Download gff for
BS08503.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11157423..11158270 | 13..861 | 99 | <- | Plus |
arm_3R | 11158338..11158386 | 862..910 | 100 | | Plus |
BS08503.5prime Sequence
906 bp (800 high quality bases) assembled on 2006-01-10
> BS08503.5prime
GAAGTTATCAGTCGACATGTCGATGTTTTGGGGTTTGAACATGAAGCCTG
AGCGCAAGTACTCGCAGACGATCATCAAGTCGTTCCACATCTCGGGCGTG
GCACTCGACAAGGGCCAGGAGGCCAAGTTGTACCTCGCTGCCGAGAAGCA
GGAGTACATCGTGGCCACCGTGACCAAGGCCATTCCACAGGTTGCGCTCG
ACCTGAACTTCAGCAAGGGCGATCGCATCATGTTCTACACCGCCGGCGAC
GCCAGCGTTTCTCTGTTGGGCTACTTGCACGACATTGATTCCGAAGATGA
TGAGGATGACGATCAAATGACGATCGAGAATTTGCTGAACTCCAAGGCGA
TCAAGAATAGCAAAAAGTCTGAAGATGATGAGGATGAGAATGAGAGCGGC
GAGGAGGACGAGGAGGATACTGATGACGATAGCCAGATAATCGAGGAATA
CGAGTCCTTCCTCGAAAATGGTGAGGAGGAAGATGACGACGATGTTGATG
AGGATAACGAGGAGAGTGGCGAGGAGGATGAACAGGACAGCGACGACTCC
GAAGCTGAAGAGGAACAGCCAAAGGCCAAGGTTGCCAAGCTCTCTCCTGG
CGCTAGCGCCAAGAAATCTGGCAAGGAGCAGAACGGTGTGGCCAAGAAGG
AGGAGGCCAAGCAGCAGCAAAAGAAGAAGGAGAAGCCAGAGGCCAAGAAG
GAACAACCCAAGGCCAAGGAGCCAGCCAAGCAGCAACCAGCTTCTAAGGA
TCCACGTACTATCACCGGAGGCGTGAAGATTGTGGATCAGGTCGTCGGCA
AAGGCGAAGAAGCCAAGCAGGGCCAACGCGTATCTGTTTACTACATCGGC
CGCCTGCAGTCGAACAACAAGACCTTCGACAGCCTCCTGAAAGGAAAACC
ATTTAA
BS08503.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:08:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6226-PA | 1074 | FK506-bp1-RA | 1..890 | 17..906 | 4400 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:35:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FK506-bp1-RA | 1299 | CG6226-RA | 106..995 | 17..906 | 4420 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:35:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15331888..15332549 | 906..245 | 3280 | 99.7 | Minus |
3R | 32079331 | 3R | 15332615..15332829 | 246..32 | 1075 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 12:35:26 has no hits.
BS08503.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:42:23 Download gff for
BS08503.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6226-PA | 1..888 | 17..904 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:42:16 Download gff for
BS08503.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6226-PA | 1..888 | 17..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:25:34 Download gff for
BS08503.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FK506-bp1-RA | 98..995 | 8..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:55:42 Download gff for
BS08503.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FK506-bp1-RA | 98..995 | 8..906 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:55:42 Download gff for
BS08503.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15331888..15332548 | 246..906 | 99 | <- | Minus |
3R | 15332616..15332828 | 33..245 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:25:34 Download gff for
BS08503.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11157610..11158270 | 246..906 | 99 | <- | Minus |
arm_3R | 11158338..11158550 | 33..245 | 100 | <- | Minus |
BS08503.complete Sequence
1106 bp (1106 high quality bases) assembled on 2006-01-18
GenBank Submission: FJ636185
> BS08503.complete
GAAGTTATCAGTCGACATGTCGATGTTTTGGGGTTTGAACATGAAGCCTG
AGCGCAAGTACTCGCAGACGATCATCAAGTCGTTCCACATCTCGGGCGTG
GCACTCGACAAGGGCCAGGAGGCCAAGTTGTACCTCGCTGCCGAGAAGCA
GGAGTACATCGTGGCCACCGTGACCAAGGCCATTCCACAGGTTGCGCTCG
ACCTGAACTTCAGCAAGGGCGATCGCATCATGTTCTACACCGCCGGCGAC
GCCAGCGTTTCTCTGTTGGGCTACTTGCACGACATTGATTCCGAAGATGA
TGAGGATGACGATCAAATGACGATCGAGAATTTGCTGAACTCCAAGGCGA
TCAAGAATAGCAAAAAGTCTGAAGATGATGAGGATGAGAATGAGAGCGGC
GAGGAGGACGAGGAGGATACTGATGACGATAGCCAGATAATCGAGGAATA
CGAGTCCTTCCTCGAAAATGGTGAGGAGGAAGATGACGACGATGTTGATG
AGGATAACGAGGAGAGTGGCGAGGAGGATGAACAGGACAGCGACGACTCC
GAAGCTGAAGAGGAACAGCCAAAGGCCAAGGTTGCCAAGCTCTCTCCTGG
CGCTAGCGCCAAGAAATCTGGCAAGGAGCAGAACGGTGTGGCCAAGAAGG
AGGAGGCCAAGCAGCAGCAAAAGAAGAAGGAGAAGCCAGAGGCCAAGAAG
GAACAACCCAAGGCCAAGGAGCCAGCCAAGCAGCAACCAGCTTCTAAGGA
TCCACGTACTATCACCGGAGGCGTGAAGATTGTGGATCAGGTCGTCGGCA
AAGGCGAAGAAGCCAAGCAGGGCAAACGCGTATCTGTTTACTACATCGGC
CGCCTGCAGTCGAACAACAAGACCTTCGACAGCCTCCTGAAGGGAAAACC
ATTTAAGTTCGCCCTGGGCGGCGGAGAGGTCATCAAGGGCTGGGACGTGG
GAGTCGCCGGCATGAAGGTGGGCGGCAAGCGAGTCATTACCTGCCCCCCG
CACATGGCGTACGGCGCACGGGGAGCTCCACCGAAGATCGGACCGAACTC
CACTCTCGTCTTCGAAGTGGAACTGAAAGCTGTGCATTAGAAGCTTTCTA
GACCAT
BS08503.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:45:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FK506-bp1-RA | 1074 | CG6226-PA | 1..1074 | 17..1090 | 5370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:45:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FK506-bp1-RA | 1299 | CG6226-RA | 106..1179 | 17..1090 | 5370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:45:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15331704..15332549 | 1090..245 | 4230 | 100 | Minus |
3R | 32079331 | 3R | 15332615..15332829 | 246..32 | 1075 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:45:14 has no hits.
BS08503.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:02:59 Download gff for
BS08503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FK506-bp1-RA | 1..1074 | 17..1090 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:40:52 Download gff for
BS08503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FK506-bp1-RA | 107..1191 | 8..1094 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:43 Download gff for
BS08503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FK506-bp1-RA | 106..1179 | 17..1090 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:02:59 Download gff for
BS08503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FK506-bp1-RA | 107..1191 | 8..1094 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:40 Download gff for
BS08503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
FK506-bp1-RA | 106..1179 | 17..1090 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:40 Download gff for
BS08503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15331704..15332548 | 246..1090 | 100 | <- | Minus |
3R | 15332616..15332828 | 33..245 | 100 | <- | Minus |
3R | 15333013..15333028 | 17..32 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:43 Download gff for
BS08503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11157426..11158270 | 246..1090 | 100 | <- | Minus |
arm_3R | 11158338..11158550 | 33..245 | 100 | <- | Minus |
arm_3R | 11158735..11158750 | 17..32 | 100 | | Minus |
BS08503.pep Sequence
Translation from 16 to 1089
> BS08503.pep
MSMFWGLNMKPERKYSQTIIKSFHISGVALDKGQEAKLYLAAEKQEYIVA
TVTKAIPQVALDLNFSKGDRIMFYTAGDASVSLLGYLHDIDSEDDEDDDQ
MTIENLLNSKAIKNSKKSEDDEDENESGEEDEEDTDDDSQIIEEYESFLE
NGEEEDDDDVDEDNEESGEEDEQDSDDSEAEEEQPKAKVAKLSPGASAKK
SGKEQNGVAKKEEAKQQQKKKEKPEAKKEQPKAKEPAKQQPASKDPRTIT
GGVKIVDQVVGKGEEAKQGKRVSVYYIGRLQSNNKTFDSLLKGKPFKFAL
GGGEVIKGWDVGVAGMKVGGKRVITCPPHMAYGARGAPPKIGPNSTLVFE
VELKAVH*
BS08503.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:22:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
FK506-bp1-PA | 357 | CG6226-PA | 1..357 | 1..357 | 1834 | 100 | Plus |
FK506-bp2-PA | 108 | CG11001-PA | 2..107 | 252..356 | 241 | 48.1 | Plus |
Fkbp14-PF | 216 | CG9847-PF | 39..129 | 264..353 | 220 | 47.3 | Plus |
Fkbp14-PE | 216 | CG9847-PE | 39..129 | 264..353 | 220 | 47.3 | Plus |
CG14715-PA | 138 | CG14715-PA | 17..126 | 242..353 | 216 | 45.1 | Plus |