Clone BS08591 Report

Search the DGRC for BS08591

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:85
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG5482-RA
Protein status:BS08591.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS08591.3prime Sequence

876 bp (828 high quality bases) assembled on 2006-01-10

> BS08591.3prime
ATGGTCTAGAAAGCTTTTAGTACTTGTAACGATAAATAGCGACGCCAGCC
ACTCCAATTAATATCGTACCCATTAGATAGCCAAGCAGCTTCAGCTTGGA
ATTGTCGACAAGCGGCTGCTTTTGCCTGGTGGCAGTATTCTGCTCCATTT
TTTTGGCCTGGCCCAGCATCTTTTGATACATCTCCTTTTCGTTGTGCTCC
TCACGACGAGCCTTGATGAAAAGTCTGGCCAAATCCGATTGAACGGCTCG
ATTTTCGGGTTCGAGAGTAGCCACTTTTTGCAGTAGCTTAATAGCACCCT
GGGTGTCCGCTTTGCCCTCCAATATTCTTCCTTTGCGATACAAGGCTTTG
GAGTTATTTGGCTGGCACCGCAGCACATGCTCCACGGACTGCAGAGCTGC
GTCATAAGCGGCAATCTTGATTTGAGTCATTGCCAAGTTATTGTAAACGA
TCAACCGATCCTCTAGCAGGGTCTGCGTGTCACTGTTCGAGAGCTCCAAG
TCTTCCTTGTCGAACTCGGAGTCCGGATCCCCATCACGATTGTCCAGAAA
GTCGAGGGCACGTCTGTACAGGTGAATGGCGGTTGTGAACTCCGAGCGTT
TGTAAAAGAAATTGGCACGTTCTTTCTTGCGCGTACCATATTTGCGCAGT
ATTTCAAAGCTCTTAAGGTCCGCAAATTCTTCGTATTTGATATCCAGAAG
CTCTATTTCGTAGGTAAGGTGCGCATCGGGTGGTACCAGGTACTCGGATT
CACCCTCTTTTTTCAGTCCTAGGGAGCCGTAGCCGAAGCGGGATCCACGC
TGACTTGGGACACTTCGCCGACCTGCAGCATGGGCAACACCATATCTAAT
CCTTGGATACCTCGTAGTCTCCCACG

BS08591.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:09:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG5482-PA 1194 CG5482-RA 418..1194 793..17 3885 100 Minus
CG5482-PA 1194 CG5482-RA 351..417 859..793 335 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:33:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG5482-RD 1780 CG5482-RD 635..1496 876..17 4260 99.8 Minus
CG5482-RC 1958 CG5482-RC 492..1353 876..17 4260 99.8 Minus
CG5482-RB 1642 CG5482-RB 497..1358 876..17 4260 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:33:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18630629..18630939 326..636 1555 100 Plus
2R 25286936 2R 18630334..18630568 91..325 1160 99.6 Plus
2R 25286936 2R 18631133..18631292 719..876 700 98.8 Plus
2R 25286936 2R 18630996..18631078 636..718 415 100 Plus
2R 25286936 2R 18630199..18630278 17..96 400 100 Plus
Blast to na_te.dros performed on 2015-02-11 11:33:14 has no hits.

BS08591.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:44:45 Download gff for BS08591.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5482-PA 333..1194 17..876 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:45:42 Download gff for BS08591.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5482-PA 333..1194 17..876 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 07:53:35 Download gff for BS08591.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5482-RA 492..1353 17..876 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:51:06 Download gff for BS08591.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5482-RB 497..1358 17..876 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:51:06 Download gff for BS08591.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 18630199..18630276 17..94 100 <- Plus
2R 18630338..18630568 95..325 100 <- Plus
2R 18630629..18630938 326..635 100 <- Plus
2R 18630996..18631078 636..718 100 <- Plus
2R 18631133..18631292 719..876 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 07:53:35 Download gff for BS08591.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14517704..14517781 17..94 100 <- Plus
arm_2R 14517843..14518073 95..325 100 <- Plus
arm_2R 14518134..14518443 326..635 100 <- Plus
arm_2R 14518501..14518583 636..718 100 <- Plus
arm_2R 14518638..14518797 719..876 98   Plus

BS08591.5prime Sequence

858 bp (801 high quality bases) assembled on 2006-01-10

> BS08591.5prime
GAAGTTATCAGTCGACATGGATACGGAGAAGTCTAGCAGCAGCTCCTTCG
AGGACCTGACCAACGCCGAGGACACCAAAGACATTCGCAAGGTGGCAGCG
GAGGAGGCAGCCTCCGGAGATGGCGCACCCCCGGCATCCGTTTCTGGAGA
CGGACAGAAGGCGGAGGAGGAGGATGCAGAGGAGGAATGTGATATACTGG
GTAACAAGCAGCTGATTAAGCGCACCATCAAAAAGGCACCGCAAGACTCG
TTTAGGCGTCCGATTCGCGGCGAATTGGTCACCGTGAACTTCACTGGAAA
ACTGGACAACGGCACGGTGGTCGAGAACGAGTTGAACTTCCAGTGTCACG
TGGGAGACTACGAGGTTATCCAAGGATTAGATATGGTGTTGCCCATGCTG
CAGGTCGGCGAAGTGTCCCAAGTCAGCGTGGATTCCCGCTTCGGCTACGG
CTCCCTAGGACTGAAAAAAGAGGGTGAATCCGAGTACCTGGTACCACCCG
ATGCGCACCTTACCTACGAAATAGAGCTTCTGGATATCAAATACGAAGAA
TTTGCGGACCTTAAGAGCTTTGAAATACTGCGCAAATATGGTACGCGCAA
GAAAGAACGTGCCAATTTCTTTTACAAACGCTCGGAGTTCACAACCGCCA
TTCACCTGTACAGACGTGCCCTCGACTTTCTGGACAATCGTGATGGGGAT
CCGGACTCCGAGTTCGACAAGGAAGACTTGGAGCTCTCGAACAGTGACAC
GCAGACCCTGCTAGAGGATCGGTTGATCGTTTACAATAACTTGGCAATGA
CTCAAATCAAGATTGCCGCTTATGACGCAGCTCTGCAGTCCGTGGAGCAT
GTGCTGCG

BS08591.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:09:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG5482-PA 1194 CG5482-RA 1..842 17..858 4210 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:43:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG5482-RD 1780 CG5482-RD 303..1144 17..858 4210 100 Plus
CG5482-RC 1958 CG5482-RC 160..1001 17..858 4210 100 Plus
CG5482-RB 1642 CG5482-RB 165..1006 17..858 4210 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:43:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18631133..18631624 508..17 2460 100 Minus
2R 25286936 2R 18630672..18630939 858..591 1340 100 Minus
2R 25286936 2R 18630996..18631078 591..509 415 100 Minus
Blast to na_te.dros performed on 2015-02-11 17:43:23 has no hits.

BS08591.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:44:46 Download gff for BS08591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5482-PA 1..842 17..858 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:45:43 Download gff for BS08591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5482-PA 1..842 17..858 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:20:34 Download gff for BS08591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5482-RA 154..1001 11..858 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:22:50 Download gff for BS08591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5482-RB 159..1006 11..858 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:22:50 Download gff for BS08591.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18630672..18630938 592..858 100 <- Minus
2R 18630996..18631078 509..591 100 <- Minus
2R 18631133..18631630 11..508 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:20:34 Download gff for BS08591.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14518177..14518443 592..858 100 <- Minus
arm_2R 14518501..14518583 509..591 100 <- Minus
arm_2R 14518638..14519135 11..508 99   Minus

BS08591.complete Sequence

1226 bp (1226 high quality bases) assembled on 2006-01-18

GenBank Submission: FJ636203

> BS08591.complete
GAAGTTATCAGTCGACATGGATACGGAGAAGTCTAGCAGCAGCTCCTTCG
AGGACCTGACCAACGCCGAGGACACCAAAGACATTCGCAAGGTGGCAGCG
GAGGAGGCAGCCTCCGGAGATGGCGCACCCCCGGCATCCGTTTCTGGAGA
CGGACAGAAGGCGGAGGAGGAGGATGCAGAGGAGGAATGTGATATACTGG
GTAACAAGCAGCTGATTAAGCGCACCATCAAAAAGGCACCGCAAGACTCG
TTTAGGCGTCCGATTCGCGGCGAATTGGTCACCGTGAACTTCACTGGAAA
ACTGGACAACGGCACGGTGGTCGAGAACGAGTTGAACTTCCAGTGTCACG
TGGGAGACTACGAGGTTATCCAAGGATTAGATATGGTGTTGCCCATGCTG
CAGGTCGGCGAAGTGTCCCAAGTCAGCGTGGATTCCCGCTTCGGCTACGG
CTCCCTAGGACTGAAAAAAGAGGGTGAATCCGAGTACCTGGTACCACCCG
ATGCGCACCTTACCTACGAAATAGAGCTTCTGGATATCAAATACGAAGAA
TTTGCGGACCTTAAGAGCTTTGAAATACTGCGCAAATATGGTACGCGCAA
GAAAGAACGTGCCAATTTCTTTTACAAACGCTCGGAGTTCACAACCGCCA
TTCACCTGTACAGACGTGCCCTCGACTTTCTGGACAATCGTGATGGGGAT
CCGGACTCCGAGTTCGACAAGGAAGACTTGGAGCTCTCGAACAGTGACAC
GCAGACCCTGCTAGAGGATCGGTTGATCGTTTACAATAACTTGGCAATGA
CTCAAATCAAGATTGCCGCTTATGACGCAGCTCTGCAGTCCGTGGAGCAT
GTGCTGCGGTGCCAGCCAAATAACTCCAAAGCCTTGTATCGCAAAGGAAG
AATATTGGAGGGCAAAGCGGACACCCAGGGTGCTATTAAGCTACTGCAAA
AAGTGGCTACTCTCGAACCCGAAAATCGAGCCGTTCAATCGGATTTGGCC
AGACTTTTCATCAAGGCTCGTCGTGAGGAGCACAACGAAAAGGAGATGTA
TCAAAAGATGCTGGGCCAGGCCAAAAAAATGGAGCAGAATACTGCCACCA
GGCAAAAGCAGCCGCTTGTCGACAATTCCAAGCTGAAGCTGCTTGGCTAT
CTAATGGGTACGATATTAATTGGAGTGGCTGGCGTCGCTATTTATCGTTA
CAAGTACTAAAAGCTTTCTAGACCAT

BS08591.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG5482-RD 1194 CG5482-PD 1..1194 17..1210 5970 100 Plus
CG5482-RC 1194 CG5482-PC 1..1194 17..1210 5970 100 Plus
CG5482-RB 1194 CG5482-PB 1..1194 17..1210 5970 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG5482-RD 1780 CG5482-RD 303..1496 17..1210 5970 100 Plus
CG5482-RC 1958 CG5482-RC 160..1353 17..1210 5970 100 Plus
CG5482-RB 1642 CG5482-RB 165..1358 17..1210 5970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18631133..18631624 508..17 2460 100 Minus
2R 25286936 2R 18630629..18630939 901..591 1555 100 Minus
2R 25286936 2R 18630334..18630568 1136..902 1160 99.6 Minus
2R 25286936 2R 18630996..18631078 591..509 415 100 Minus
2R 25286936 2R 18630199..18630278 1210..1131 400 100 Minus
Blast to na_te.dros performed on 2014-11-27 01:05:23 has no hits.

BS08591.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:02:39 Download gff for BS08591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5482-RA 1..1194 17..1210 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:40:26 Download gff for BS08591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5482-RA 150..1349 11..1210 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:44:37 Download gff for BS08591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5482-RA 160..1351 17..1208 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:02:39 Download gff for BS08591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5482-RA 150..1349 11..1210 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:18:14 Download gff for BS08591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5482-RB 165..1356 17..1208 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:18:14 Download gff for BS08591.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18630201..18630276 1133..1208 100 <- Minus
2R 18630338..18630568 902..1132 100 <- Minus
2R 18630629..18630938 592..901 100 <- Minus
2R 18630996..18631078 509..591 100 <- Minus
2R 18631133..18631624 17..508 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:44:37 Download gff for BS08591.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14517706..14517781 1133..1208 100 <- Minus
arm_2R 14517843..14518073 902..1132 100 <- Minus
arm_2R 14518134..14518443 592..901 100 <- Minus
arm_2R 14518501..14518583 509..591 100 <- Minus
arm_2R 14518638..14519129 17..508 100   Minus

BS08591.pep Sequence

Translation from 16 to 1209

> BS08591.pep
MDTEKSSSSSFEDLTNAEDTKDIRKVAAEEAASGDGAPPASVSGDGQKAE
EEDAEEECDILGNKQLIKRTIKKAPQDSFRRPIRGELVTVNFTGKLDNGT
VVENELNFQCHVGDYEVIQGLDMVLPMLQVGEVSQVSVDSRFGYGSLGLK
KEGESEYLVPPDAHLTYEIELLDIKYEEFADLKSFEILRKYGTRKKERAN
FFYKRSEFTTAIHLYRRALDFLDNRDGDPDSEFDKEDLELSNSDTQTLLE
DRLIVYNNLAMTQIKIAAYDAALQSVEHVLRCQPNNSKALYRKGRILEGK
ADTQGAIKLLQKVATLEPENRAVQSDLARLFIKARREEHNEKEMYQKMLG
QAKKMEQNTATRQKQPLVDNSKLKLLGYLMGTILIGVAGVAIYRYKY*

BS08591.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:22:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG5482-PD 397 CG5482-PD 1..397 1..397 2013 100 Plus
CG5482-PC 397 CG5482-PC 1..397 1..397 2013 100 Plus
CG5482-PB 397 CG5482-PB 1..397 1..397 2013 100 Plus
CG5482-PA 397 CG5482-PA 1..397 1..397 2013 100 Plus
FKBP59-PB 439 CG4535-PB 132..403 67..359 239 25.1 Plus