Clone Sequence Records
BS08656.3prime Sequence
855 bp (851 high quality bases) assembled on 2006-01-11
> BS08656.3prime
ATGGTCTAGAAAGCTTCTATTCAAAGTTCTGATAATTCTCGGCGCTGACG
AACTGTGCCCGTTGCTGGGGTGTCATGTTGAGATTACCGCGGTTCTTGTT
GTTGTAGGCCCAGATGACGCCGGTGGAGATCAGGGCAATGGTCAGCCAGC
CCATGAAGAACAACTGCAGCCACATGTGCTCGCCGCCGCTGTGATCCACG
ATAATTCCAGCCACGATAGTGATGACCGCCAAGCCAAGATTCTGTATCGA
TTGGCAGAAGCCGTAGGCCGTGCCCAATTGGTATTCCGGAATGATGAGAG
CCACCAGAGGCCACAGGCTTGCGGCCAGCATGGAATACGACAGTCCCATG
ATGATCATGCCCACATAGGGTGTCAGCTGGGTGAACGTAAGCAGGGCATG
GGCTCCAATGGTGGTCAGTGTCGCTGTGAACACCCAGGTCACATTCCTAC
CCAGTTTGTCGATGATGAAACCAAAGACCGGAGACGATACGGCTGCAATT
AGATACACCAGCGAGTCCACGGTGTTGGCCTCAGCAGGCGAAAGCCCGAA
GCGATCAACAAAGAAATTCTGTCCGAGGGCAATGAATGGGAAGATGGCCA
CATAGTAGGCGACGCAAATGATGGATACCATCCAAAAGGGTGGTTTGAAC
GAAAAGACATCGGTGAGTTTCGGTATCTGTCCAGCCGGGTTGTTGTTACG
CTGCAAAATCCGCTCGGCCCTCTTGTCCATCCAGCCGAGGATGAGGGCAC
AGGTCATCGACATCACACAGGTGAGGGTAGCCAGCAATAAGACGACGCCT
AGAGCGGTATGTCCCTTGTAAAAATTGCTCACATACTCATAGATGGGCTG
CATCA
BS08656.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:11:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8602-PA | 1437 | CG8602-RA | 599..1437 | 855..17 | 4195 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:28:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8602-RB | 2318 | CG8602-RB | 1113..1953 | 855..15 | 4205 | 100 | Minus |
| CG8602-RA | 2570 | CG8602-RA | 1113..1953 | 855..15 | 4205 | 100 | Minus |
| CG12194-RB | 2105 | CG12194-RB | 1366..1662 | 448..152 | 270 | 73.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:28:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7326890..7327730 | 15..855 | 4205 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:28:46 has no hits.
BS08656.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:46:34 Download gff for
BS08656.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-PA | 600..1437 | 17..854 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:48:09 Download gff for
BS08656.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-PA | 600..1437 | 17..854 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:30:40 Download gff for
BS08656.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-RA | 1114..1953 | 15..854 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:41:32 Download gff for
BS08656.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-RA | 1114..1953 | 15..854 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:41:32 Download gff for
BS08656.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7326890..7327729 | 15..854 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:30:40 Download gff for
BS08656.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7319990..7320829 | 15..854 | 100 | | Plus |
BS08656.5prime Sequence
897 bp (858 high quality bases) assembled on 2006-01-11
> BS08656.5prime
GAAGTTATCAGTCGACATGGCGCGCGAGGACGAGGAACGCATCGTGGACA
ATGAGGAGGTGTCGCGACCGACGGAGGAGGACCAAGTGGTCAGTCGGGCC
GGTCGGCGTGACAATGAACTGAGCCTTCCGTCCGGCGGCTGCTGCATGCC
CTCGAGCACGAGCCACCGCTTCATGGCTCTGGTGTTCATGTGCCTGCTGG
GATTCGGCTCCTATTTCTGTTACGATGCACCCGGCGCCCTGCAGAACTAT
TTCAAGAAAGATCTTAATCTGACCTCCGCCCAGTTCACACTCATCTACTC
GATTTACTCGTGGCCCAATGTCGTCCTGTGCTTCGTGGGAGGTTTCCTGA
TCGATCGACTGTTTGGCATTCGACTGGGCACGATTATCTACATGATGATC
CTGCTGGTGGGTCAGTTGATCTTTGCCTGCGGCGGCATTCTGGACGCCTT
CTGGATGATGATCCTGGGACGGTTTATCTTCGGCATTGGCGCCGAATCAC
TGGCGGTGGCCCAGAACAGCTATGCGGTGCTCTGGTTTAAGGGCAAGGAA
CTGAACATGGTATTCGGCCTGCAGCTGTCGGTTGCCCGATTCGGCAGCAC
CGTCAACTTCTGGGTGATGCAGCCCATCTATGAGTATGTGAGCAATTTTT
ACAAGGGACATACCGCTCTAGGCGTCGTCTTATTGCTGGCTACCCTCACC
TGTGTGATGTCGATGACCTGTGCCCTCATCCTCGGCTGGATGGACAAGAG
GGCCGAGCGGATTTTGCAGCGTAACAACAACCCGGCTGGACAGATACCGA
AACTCACCGATGTCTTTTCGTTCAAACCACCCTTTTGGATGGTATCCATC
ATTTGCGTCGCCTACTATGTGGGCATCTTCCCATTCATTGCCCTCGG
BS08656.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:11:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8602-PA | 1437 | CG8602-RA | 1..881 | 17..897 | 4355 | 99.7 | Plus |
| CG12194-PA | 1458 | CG12194-RA | 502..551 | 500..549 | 150 | 92 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:46:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8602-RB | 2318 | CG8602-RB | 508..1395 | 10..897 | 4380 | 99.5 | Plus |
| CG8602-RA | 2570 | CG8602-RA | 508..1395 | 10..897 | 4380 | 99.5 | Plus |
| CG12194-RB | 2105 | CG12194-RB | 497..965 | 153..621 | 905 | 79.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:45:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7327448..7328335 | 897..10 | 4380 | 99.5 | Minus |
| 2L | 23513712 | 2L | 4839579..4839991 | 209..621 | 850 | 80.4 | Plus |
Blast to na_te.dros performed on 2015-02-12 01:45:58 has no hits.
BS08656.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:46:35 Download gff for
BS08656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-PA | 1..881 | 17..897 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:48:10 Download gff for
BS08656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-PA | 1..881 | 17..897 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:50:49 Download gff for
BS08656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-RA | 508..1395 | 10..897 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:48:00 Download gff for
BS08656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-RA | 508..1395 | 10..897 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:48:00 Download gff for
BS08656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7327448..7328335 | 10..897 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:50:49 Download gff for
BS08656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7320548..7321435 | 10..897 | 99 | | Minus |
BS08656.complete Sequence
1469 bp (1469 high quality bases) assembled on 2006-01-25
> BS08656.complete
GAAGTTATCAGTCGACATGGCGCGCGAGGACGAGGAACGCATCGTGGACA
ATGAGGAGGTGTCGCGACCGACGGAGGAGGACCAAGTGGTCAGTCGGGCC
GGTCGGCGTGACAATGAACTGAGCCTTCCGTCCGGCGGCTGCTGCATGCC
CTCGAGCACGAGCCACCGCTTCATGGCTCTGGTGTTCATGTGCCTGCTGG
GATTCGGCTCCTATTTCTGTTACGATGCACCCGGCGCCCTGCAGAACTAT
TTCAAGAAAGATCTTAATCTGACCTCCGCCCAGTTCACACTCATCTACTC
GATTTACTCGTGGCCCAATGTCGTCCTGTGCTTCGTGGGAGGTTTCCTGA
TCGATCGACTGTTTGGCATTCGACTGGGCACGATTATCTACATGATGATC
CTGCTGGTGGGTCAGTTGATCTTTGCCTGCGGCGGCATTCTGGACGCCTT
CTGGATGATGATCCTGGGACGGTTTATCTTCGGCATTGGCGCCGAATCAC
TGGCGGTGGCCCAGAACAGCTATGCGGTGCTCTGGTTTAAGGGCAAGGAA
CTGAACATGGTATTCGGCCTGCAGCTGTCGGTTGCCCGATTCGGCAGCAC
CGTCAACTTCTGGGTGATGCAGCCCATCTATGAGTATGTGAGCAATTTTT
ACAAGGGACATACCGCTCTAGGCGTCGTCTTATTGCTGGCTACCCTCACC
TGTGTGATGTCGATGACCTGTGCCCTCATCCTCGGCTGGATGGACAAGAG
GGCCGAGCGGATTTTGCAGCGTAACAACAACCCGGCTGGACAGATACCGA
AACTCACCGATGTCTTTTCGTTCAAACCACCCTTTTGGATGGTATCCATC
ATTTGCGTCGCCTACTATGTGGCCATCTTCCCATTCATTGCCCTCGGACA
GAATTTCTTTGTTGATCGCTTCGGGCTTTCGCCTGCTGAGGCCAACACCG
TGGACTCGCTGGTGTATCTAATTGCAGCCGTATCGTCTCCGGTCTTTGGT
TTCATCATCGACAAACTGGGTAGGAATGTGACCTGGGTGTTCACAGCGAC
ACTGACCACCATTGGAGCCCATGCCCTGCTTACGTTCACCCAGCTGACAC
CCTATGTGGGCATGATCATCATGGGACTGTCGTATTCCATGCTGGCCGCA
AGCCTGTGGCCTCTGGTGGCTCTCATCATTCCGGAATACCAATTGGGCAC
GGCCTACGGCTTCTGCCAATCGATACAGAATCTTGGCTTGGCGGTCATCA
CTATCGTGGCTGGAATTATCGTGGATCACAGCGGCGGCGAGCACATGTGG
CTGCAGTTGTTCTTCATGGGCTGGCTGACCATTGCCCTGATCTCCACCGG
CGTCATCTGGGCCTACAACAACAAGAACCGCGGTAATCTCAACATGACAC
CCCAGCAACGGGCACAGTTCGTCAGCGCCGAGAATTATCAGAACTTTGAA
TAGAAGCTTTCTAGACCAT
BS08656.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:47:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8602-RB | 1437 | CG8602-PB | 1..1437 | 17..1453 | 7170 | 99.9 | Plus |
| CG8602-RA | 1437 | CG8602-PA | 1..1437 | 17..1453 | 7170 | 99.9 | Plus |
| CG12194-RB | 1491 | CG12194-PB | 155..1320 | 153..1318 | 955 | 72.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:47:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8602-RB | 2318 | CG8602-RB | 508..1953 | 10..1455 | 7185 | 99.8 | Plus |
| CG8602-RA | 2570 | CG8602-RA | 508..1953 | 10..1455 | 7185 | 99.8 | Plus |
| CG12194-RB | 2105 | CG12194-RB | 497..1662 | 153..1318 | 955 | 72.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:47:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7326890..7328335 | 1455..10 | 7185 | 99.8 | Minus |
| 2L | 23513712 | 2L | 4839579..4839991 | 209..621 | 850 | 80.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:47:29 has no hits.
BS08656.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:02:04 Download gff for
BS08656.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-RA | 1..1437 | 17..1453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:39:43 Download gff for
BS08656.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-RA | 524..1969 | 10..1455 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:42:08 Download gff for
BS08656.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-RA | 515..1951 | 17..1453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:02:04 Download gff for
BS08656.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-RA | 524..1969 | 10..1455 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:30:55 Download gff for
BS08656.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8602-RA | 515..1951 | 17..1453 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:30:55 Download gff for
BS08656.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7326892..7328328 | 17..1453 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:42:08 Download gff for
BS08656.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7319992..7321428 | 17..1453 | 99 | | Minus |
BS08656.pep Sequence
Translation from 16 to 1452
> BS08656.pep
MAREDEERIVDNEEVSRPTEEDQVVSRAGRRDNELSLPSGGCCMPSSTSH
RFMALVFMCLLGFGSYFCYDAPGALQNYFKKDLNLTSAQFTLIYSIYSWP
NVVLCFVGGFLIDRLFGIRLGTIIYMMILLVGQLIFACGGILDAFWMMIL
GRFIFGIGAESLAVAQNSYAVLWFKGKELNMVFGLQLSVARFGSTVNFWV
MQPIYEYVSNFYKGHTALGVVLLLATLTCVMSMTCALILGWMDKRAERIL
QRNNNPAGQIPKLTDVFSFKPPFWMVSIICVAYYVAIFPFIALGQNFFVD
RFGLSPAEANTVDSLVYLIAAVSSPVFGFIIDKLGRNVTWVFTATLTTIG
AHALLTFTQLTPYVGMIIMGLSYSMLAASLWPLVALIIPEYQLGTAYGFC
QSIQNLGLAVITIVAGIIVDHSGGEHMWLQLFFMGWLTIALISTGVIWAY
NNKNRGNLNMTPQQRAQFVSAENYQNFE*
BS08656.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:08:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8602-PB | 478 | CG8602-PB | 1..478 | 1..478 | 2498 | 100 | Plus |
| CG8602-PA | 478 | CG8602-PA | 1..478 | 1..478 | 2498 | 100 | Plus |
| CG12194-PC | 485 | CG12194-PC | 1..483 | 1..478 | 1821 | 70 | Plus |
| CG12194-PA | 485 | CG12194-PA | 1..483 | 1..478 | 1821 | 70 | Plus |
| CG12194-PB | 496 | CG12194-PB | 1..474 | 1..468 | 1820 | 70.9 | Plus |
