Clone BS08751 Report

Search the DGRC for BS08751

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:87
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG9135-RA
Protein status:BS08751.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS08751.3prime Sequence

864 bp (742 high quality bases) assembled on 2006-01-11

> BS08751.3prime
ATGGTCTAGAAAGCTTCTAATCATCGATAGTGTACTCGGGCATCTTCTCG
TACTTTTGCTTGGTGGCCTCATGGGTGGTGTCCACAAGCAACACCGTGTG
CGAGTAACCCATAGTCACTTGAGGTATTTTAATGTTGTCCAACTTTGGCA
CCTCCTTGGGCACCGTCGACGACTTCTGGAACTCCCCAATGCCCAGCTCG
CCAAACGTGGGCGATGCGCCCCAAGCGATCAGTGTGTCGTCGGCCGAAAT
CATAATCGATGTATTGGCACAGCCAATGTCGGTAATGTTCCAGCCGGAAA
GATCCTGCACTGGCTTGGGGTACATATTTGCCTCGCCCGTCTTCTTATTC
TGTCCGAACAAAAACAGCAGGCCCAGCTCGTTGACGATCAGACTGAAAGT
GGAGCCGCAAAAGACGCTGCGCCCACCCCGACCCTGAGTATCGAAAAACT
TCATTAAACGCGGCACCATTTCGTCCTTGGGCTCTGCGTGTCCGAGACGC
CCGAAACCGCCAAAGCCCCAGCTATAAACGCGCTTCTTGGAGTCGATGGC
GACCGTGTGATTATTGCCGCAAGCAAAGTCAACTATCTGCACGCCATCGA
CTGGCGTTACATGACCCTCCTTGCTCTTCTCTATGTACAAAACGACCTTT
TTGGGCGACGTCTCGAAATGGAATGACAATTTGTTGGCGTTGACAAAGTA
CTTGGCGTCAGTATTGTGTCCCAACTGACCGTACTCCGGCAGCCCAAATG
TGTGCAGGCTACCTTTAATGTCCAGAATAACAGAGAACTCAGCTCCGCAA
CCGATGCGAATGATCGGCGGACCTCGGTAGTTAATTGGCGTGGGCGAATA
AATGTTAGCATGCG

BS08751.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:13:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG9135-PA 1464 CG9135-RA 617..1464 864..17 4240 100 Minus
CG9135-PB 1464 CG9135-RB 617..1464 864..17 4240 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG9135-RD 1871 CG9135-RD 800..1647 864..17 4240 100 Minus
CG9135-RC 2227 CG9135-RC 761..1608 864..17 4240 100 Minus
CG9135-RB 1978 CG9135-RB 907..1754 864..17 4240 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:16:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6052721..6053258 554..17 2690 100 Minus
2L 23513712 2L 6052351..6052663 864..552 1565 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:16:52 has no hits.

BS08751.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:49:08 Download gff for BS08751.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9135-PA 617..1464 17..864 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:51:42 Download gff for BS08751.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9135-PB 617..1464 17..864 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:29:11 Download gff for BS08751.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9135-RA 761..1614 11..864 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:39:41 Download gff for BS08751.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9135-RB 907..1760 11..864 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:39:41 Download gff for BS08751.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6052722..6053264 11..553 99   Minus
2L 6052351..6052661 554..864 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:29:11 Download gff for BS08751.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6052351..6052661 554..864 100 -> Minus
arm_2L 6052722..6053264 11..553 99   Minus

BS08751.5prime Sequence

908 bp (808 high quality bases) assembled on 2006-01-11

> BS08751.5prime
GAAGTTATCAGTCGACATGTCGGCCAAGCGAAAGGCAGGTGGCAATGGAG
CCGGACCCAACAAGCGGCGACCCAAAAAGAAGGAGTCGGACTACGAGGAC
GAGTTCAGCGACGAGTCCGACGACGATGGCGTGCAGCAGCAGGCAGCGGC
CGCCAACCAGATGGAGGTTCTCATTCCCCACGACGACCTCGACCCGCCTA
GCAAGCTTCCCGAGGACTTGCTGGCCACGCTAGAGAAGACTCCAGGTCAG
ATGCTGATCGCCGGCATGGTGACCTGGGACCTGACTGGCAAGCGGGACCG
CAAGAACGTCACGAAGGTGCGGCCGAATCTGTACAGCTTCCATCGGTTCA
CAGAAGAGAAGTACCGATATGTGGCCAGCGGACCCAGTGCCGCACACACC
ATTCTTATCAACATGGACCGCAAGGCGCTCGGTTTCGGGCGTAATCCCAG
CGGCCAGCTGGGCCTCAGCCAAGACATCAAGTTGGCGGAGAAGCCCACCA
TTATTCCGGCCCTCGAACAGCTGAACATAGTGCAAGCTGCTGTCGGCCGG
CACCACACTCTGTTTCTCACTGACACGGGAACCGTATACGCCTGCGGCGA
AAACAAGTCCGGCCAGTGCGGTGTGGGAAATACGCATGCTAACATTTATT
CGCCCACGCCAATTAACTACCGAGGTCCGCCGATCATTCGCATCGGTTGC
GGAGCTGAGTTCTCTGTTATTCTGGACATTAAAGGTAGCCTGCACACATT
TGGGCTGCCGGAGTACGGTCAGTTGGGACACAATACTGACGCCNAGTACT
TTGTCAACGCCAACAAATTGTCATTCCATTTCGAGACGTCGCCCAAAAAG
GTCGTTTTGTACATAGAGAAGAGCAAGGAGGGTCATGTAACGCCAGTCGA
TGGCGTGC

BS08751.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:13:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG9135-PA 1464 CG9135-RA 1..892 17..908 4441 99.8 Plus
CG9135-PB 1464 CG9135-RB 1..892 17..908 4441 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:40:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG9135-RD 1871 CG9135-RD 184..1075 17..908 4449 99.9 Plus
CG9135-RC 2227 CG9135-RC 145..1036 17..908 4449 99.9 Plus
CG9135-RB 1978 CG9135-RB 291..1182 17..908 4449 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6052078..6052626 360..908 2734 99.8 Plus
2L 23513712 2L 6051678..6052022 17..361 1725 100 Plus
Blast to na_te.dros performed on 2015-02-12 01:40:04 has no hits.

BS08751.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:49:09 Download gff for BS08751.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9135-PA 1..892 17..908 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:51:43 Download gff for BS08751.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9135-PB 1..892 17..908 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:49:45 Download gff for BS08751.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9135-RA 140..1036 10..908 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:34:51 Download gff for BS08751.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9135-RB 286..1182 10..908 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:34:51 Download gff for BS08751.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6051673..6052022 10..361 98 -> Plus
2L 6052080..6052626 362..908 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:49:45 Download gff for BS08751.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6051673..6052022 10..361 98 -> Plus
arm_2L 6052080..6052626 362..908 99   Plus

BS08751.complete Sequence

1496 bp (1496 high quality bases) assembled on 2006-01-25

GenBank Submission: FJ636255

> BS08751.complete
GAAGTTATCAGTCGACATGTCGGCCAAGCGAAAGGCAGGTGGCAATGGAG
CCGGACCCAACAAGCGGCGACCCAAAAAGAAGGAGTCGGACTACGAGGAC
GAGTTCAGCGACGAGTCCGACGACGATGGCGTGCAGCAGCAGGCAGCGGC
CGCCAACCAGATGGAGGTTCTCATTCCCCACGACGACCTCGACCCGCCTA
GCAAGCTTCCCGAGGACTTGCTGGCCACGCTAGAGAAGACTCCAGGTCAG
ATGCTGATCGCCGGCATGGTGACCTGGGACCTGACTGGCAAGCGGGACCG
CAAGAACGTCACGAAGGTGCGGCCGAATCTGTACAGCTTCCATCGGTTCA
CAGAAGAGAAGTACCGATATGTGGCCAGCGGACCCAGTGCCGCACACACC
ATTCTTATCAACATGGACCGCAAGGCGCTCGGTTTCGGGCGTAATCCCAG
CGGCCAGCTGGGCCTCAGCCAAGACATCAAGTTGGCGGAGAAGCCCACCA
TTATTCCGGCCCTCGAACAGCTGAACATAGTGCAAGCTGCTGTCGGCCGG
CACCACACTCTGTTTCTCACTGACACGGGAACCGTATACGCCTGCGGCGA
AAACAAGTCCGGCCAGTGCGGTGTGGGAAATACGCATGCTAACATTTATT
CGCCCACGCCAATTAACTACCGAGGTCCGCCGATCATTCGCATCGGTTGC
GGAGCTGAGTTCTCTGTTATTCTGGACATTAAAGGTAGCCTGCACACATT
TGGGCTGCCGGAGTACGGTCAGTTGGGACACAATACTGACGCCAAGTACT
TTGTCAACGCCAACAAATTGTCATTCCATTTCGAGACGTCGCCCAAAAAG
GTCGTTTTGTACATAGAGAAGAGCAAGGAGGGTCATGTAACGCCAGTCGA
TGGCGTGCAGATAGTTGACTTTGCTTGCGGCAATAATCACACGGTCGCCA
TCGACTCCAAGAAGCGCGTTTATAGCTGGGGCTTTGGCGGTTTCGGGCGT
CTCGGACACGCAGAGCCCAAGGACGAAATGGTGCCGCGTTTAATGAAGTT
TTTCGATACTCAGGGTCGGGGTGGGCGCAGCGTCTTTTGCGGCTCCACTT
TCAGTCTGATCGTCAACGAGCTGGGCCTGCTGTTTTTGTTCGGACAGAAT
AAGAAGACGGGCGAGGCAAATATGTACCCCAAGCCAGTGCAGGATCTTTC
CGGCTGGAACATTACCGACATTGGCTGTGCCAATACATCGATTATGATTT
CGGCCGACGACACACTGATCGCTTGGGGCGCATCGCCCACGTTTGGCGAG
CTGGGCATTGGGGAGTTCCAGAAGTCGTCGACGGTGCCCAAGGAGGTGCC
AAAGTTGGACAACATTAAAATACCTCAAGTGACTATGGGTTACTCGCACA
CGGTGTTGCTTGTGGACACCACCCATGAGGCCACCAAGCAAAAGTACGAG
AAGATGCCCGAGTACACTATCGATGATTAGAAGCTTTCTAGACCAT

BS08751.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:12:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG9135-RD 1464 CG9135-PD 1..1464 17..1480 7320 100 Plus
CG9135-RC 1464 CG9135-PC 1..1464 17..1480 7320 100 Plus
CG9135-RB 1464 CG9135-PB 1..1464 17..1480 7320 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:12:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG9135-RD 1871 CG9135-RD 184..1647 17..1480 7320 100 Plus
CG9135-RC 2227 CG9135-RC 145..1608 17..1480 7320 100 Plus
CG9135-RB 1978 CG9135-RB 291..1754 17..1480 7320 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:12:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6052078..6052663 360..945 2930 100 Plus
2L 23513712 2L 6052721..6053258 943..1480 2690 100 Plus
2L 23513712 2L 6051678..6052022 17..361 1725 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:12:50 has no hits.

BS08751.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:01:27 Download gff for BS08751.complete
Subject Subject Range Query Range Percent Splice Strand
CG9135-RB 1..1464 17..1480 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:38:45 Download gff for BS08751.complete
Subject Subject Range Query Range Percent Splice Strand
CG9135-RB 296..1770 10..1486 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:55 Download gff for BS08751.complete
Subject Subject Range Query Range Percent Splice Strand
CG9135-RA 145..1608 17..1480 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:01:27 Download gff for BS08751.complete
Subject Subject Range Query Range Percent Splice Strand
CG9135-RB 296..1770 10..1486 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:18 Download gff for BS08751.complete
Subject Subject Range Query Range Percent Splice Strand
CG9135-RB 291..1754 17..1480 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:18 Download gff for BS08751.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6051678..6052022 17..361 100 -> Plus
2L 6052080..6052661 362..943 100 -> Plus
2L 6052722..6053258 944..1480 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:55 Download gff for BS08751.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6051678..6052022 17..361 100 -> Plus
arm_2L 6052080..6052661 362..943 100 -> Plus
arm_2L 6052722..6053258 944..1480 100   Plus

BS08751.pep Sequence

Translation from 16 to 1479

> BS08751.pep
MSAKRKAGGNGAGPNKRRPKKKESDYEDEFSDESDDDGVQQQAAAANQME
VLIPHDDLDPPSKLPEDLLATLEKTPGQMLIAGMVTWDLTGKRDRKNVTK
VRPNLYSFHRFTEEKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGL
SQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQ
CGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEY
GQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIV
DFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQG
RGGRSVFCGSTFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNIT
DIGCANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNI
KIPQVTMGYSHTVLLVDTTHEATKQKYEKMPEYTIDD*

BS08751.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:12:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG9135-PD 487 CG9135-PD 1..487 1..487 2579 100 Plus
CG9135-PC 487 CG9135-PC 1..487 1..487 2579 100 Plus
CG9135-PB 487 CG9135-PB 1..487 1..487 2579 100 Plus
CG9135-PA 487 CG9135-PA 1..487 1..487 2579 100 Plus
CG9153-PA 1058 CG9153-PA 10..318 140..466 304 30.5 Plus