Clone Sequence Records
BS08829.3prime Sequence
908 bp (840 high quality bases) assembled on 2006-01-18
> BS08829.3prime
ATGGTCTAGAAAGCTTCTAGCAGCCCACCAGCTTCTCAAAGATACCGCCA
CGCTTCCAGCCGCCATTGAATCCACCTGAGAAGCCGCTATTGGAACCGCC
ATTGTAGCCACCGTTGTAGCCACCGTTGTATCCACCGTTGTAGCCACCGT
TGTATCCACCAGCGGAAGCGGCAGCGGAGGAGGAAGCACTGGAGTAGCTG
GACTCCACCGCTGGTGGTCCGTAAACCTGGGCGGGTGCACGATCCTCATC
GACGATCAGCTTGATGGTCTTCACCACCTGTTGGCTCTGTGGCTGCGGGG
CGTAGGACACGGGAGCAGGGGCGTAGCTGATGGGAGCTGGAGCTGGGGCT
GAGTAACGCACCACTGGAACTGGAGCAGGAGCGGAGTAGGTTACAGCAGG
AGCGGGACCGGAGTAGGTCACAGCGGGAGCGGGAGCGGAGTAGGTAACAG
CGGGAGCGGGAGCGGAGTAGGTAACAGCGGGAGCAGCCTGTACTCGCACC
ACAGGAGCGGGGGCAGGAGCGGAGTAGGTCACAGCTGGAGCAGGAGCAGG
AGCGGAGTAGGTCACAGCTGGAGCAGGAGCAGGAGCGGAGTAGGTCACAG
CTGGAGCGGCCTGAACGCGCACCACCGGAGCTGGAGCAGAGTAGGTCACA
GCTGGGGCAGGAGCAGGAGCGGAGTAGGTCACAGCGGGAGCTGGGGCAGA
GTAGCTCACAGCGGGTGCAGGAGCGGAATAGGTCACAGCGGGAGCTGGAG
CAGAGTAGCTCACAGAGGGAGCGGAGTATGAGTTGGCGCTGGCGCTGGAC
GAGGCACTGGACGAGTATCCTCCATAGTTGCCACCATAGCCAGAAGACCG
TCCGTAAGAGTAAGAGGGCTGCTCCACCACCTTGATGACCTTGATGACCT
GCTCGCCA
BS08829.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:14:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-PA | 1230 | CG32564-RA | 339..1230 | 908..17 | 4435 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 14:50:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-RA | 1448 | CG32564-RA | 407..1298 | 908..17 | 4445 | 99.9 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 550..809 | 651..395 | 400 | 78.7 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 664..920 | 765..506 | 400 | 78.7 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 543..688 | 484..339 | 340 | 82.2 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 831..976 | 772..627 | 340 | 82.2 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 649..943 | 753..426 | 305 | 75.2 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 570..688 | 484..372 | 285 | 83.2 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 831..943 | 745..627 | 285 | 83.2 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 856..943 | 774..687 | 215 | 83 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 595..688 | 486..399 | 195 | 81.9 | Minus |
| CG32564-RA | 1448 | CG32564-RA | 829..916 | 720..627 | 195 | 81.9 | Minus |
| CG11350-RC | 1497 | CG11350-RC | 462..525 | 691..628 | 185 | 85.9 | Minus |
| CG11350-RC | 1497 | CG11350-RC | 310..375 | 576..511 | 180 | 84.8 | Minus |
| CG11350-RC | 1497 | CG11350-RC | 385..450 | 576..511 | 180 | 84.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 14:50:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17206813..17207704 | 908..17 | 4445 | 99.9 | Minus |
| X | 23542271 | X | 17206949..17207094 | 484..339 | 340 | 82.2 | Minus |
| X | 23542271 | X | 17207237..17207382 | 772..627 | 340 | 82.2 | Minus |
| X | 23542271 | X | 17207139..17207272 | 699..572 | 335 | 85.1 | Minus |
| X | 23542271 | X | 17207114..17207184 | 574..504 | 325 | 97.2 | Minus |
| X | 23542271 | X | 17206976..17207064 | 484..396 | 280 | 87.6 | Minus |
| X | 23542271 | X | 17207237..17207325 | 745..657 | 280 | 87.6 | Minus |
| X | 23542271 | X | 17207114..17207178 | 691..627 | 265 | 93.8 | Minus |
| X | 23542271 | X | 17206952..17207004 | 715..663 | 220 | 94.3 | Minus |
| X | 23542271 | X | 17207006..17207058 | 769..717 | 220 | 94.3 | Minus |
| X | 23542271 | X | 17207237..17207295 | 430..372 | 220 | 91.5 | Minus |
| X | 23542271 | X | 17207262..17207349 | 774..687 | 215 | 83 | Minus |
| X | 23542271 | X | 17207235..17207295 | 720..660 | 185 | 86.9 | Minus |
| 3L | 28110227 | 3L | 4483335..4483398 | 691..628 | 185 | 85.9 | Minus |
Blast to na_te.dros performed on 2015-01-31 14:50:45 has no hits.
BS08829.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:51:20 Download gff for
BS08829.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-PA | 340..1230 | 17..907 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:54:44 Download gff for
BS08829.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-PA | 340..1230 | 17..907 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:10:02 Download gff for
BS08829.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 408..1303 | 12..907 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:32:02 Download gff for
BS08829.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 408..1303 | 12..907 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:32:02 Download gff for
BS08829.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17206814..17207709 | 12..907 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:10:02 Download gff for
BS08829.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17100847..17101742 | 12..907 | 99 | | Minus |
BS08829.5prime Sequence
889 bp (850 high quality bases) assembled on 2006-01-18
> BS08829.5prime
GAAGTTATCAGTCGACATGAAGCTGTACGTTTGCGTTTCGCTGGCCCTTT
TGGCCCTTTCGGCACCAGTTCCTTCCGATGCCCTGTTGGGCGCCAAATTG
GCCCTGCTCAAGGCCATTGGCGGCGGTCTGGGTGGCGGCAGCTCCGGCGG
CGGTGGCTACTCCACCGGCAGTGGTGGCTATGGAGGCGGCTATGGCAGCG
GTGGATACTCCGGCGGCTACAATCAGGGATATTACAACCAGCCCAGCAGA
CCGGTGTACAACTCCGAATACGGCAGTTCCTCATCCTCTTCCGCCAGCAG
CAGCAGCAGCTATGGAGGCAGCTATGGCGGTGGTTATGGCGGCGGCTACG
GTGGTGGCGAGCAGGTCATCAAGGTCATCAAGGTGGTGGAGCAGCCCTCT
TACTCTTACGGACGGTCCTCTGGCTATGGTGGCAACTATGGAGGATACTC
GTCCAGTGCCTCGTCCAGCGCCAGCGCCAACTCATACTCCGCTCCCTCTG
TGAGCTACTCTGCTCCAGCTCCCGCTGTGACCTATTCCGCTCCTGCACCC
GCTGTGAGCTACTCTGCCCCAGCTCCCGCTGTGACCTACTCCGCTCCTGC
TCCTGCCCCAGCTGTGACCTACTCTGCTCCAGCTCCGGTGGTGCGCGTTC
AGGCCGCTCCAGCTGTGACCTACTCCGCTCCTGCTCCTGCTCCAGCTGTG
ACCTACTCCGCTCCTGCTCCTGCTCCAGCTGTGACCTACTCCGCTCCTGC
CCCCGCTCCTGTGGTGCGAGTACAGGCTGCTCCCGCTGTTACCTACTCCG
CTCCCGCTCCCGCTGTTACCTACTCCGCTCCCGCTCCCGCTGTGACCTAC
TCCGGTCCCGCTCCTGCTGTAACCTACTCCGCTCCTGCT
BS08829.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:14:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-PA | 1230 | CG32564-RA | 1..873 | 17..889 | 4365 | 100 | Plus |
| CG32564-PA | 1230 | CG32564-RA | 817..875 | 779..837 | 170 | 91.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:47:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-RA | 1448 | CG32564-RA | 67..941 | 15..889 | 4375 | 100 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 600..943 | 494..864 | 485 | 77.6 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 546..914 | 548..889 | 475 | 77.5 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 550..809 | 612..868 | 400 | 78.7 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 664..920 | 498..757 | 400 | 78.7 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..976 | 491..636 | 340 | 82.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 543..653 | 779..889 | 315 | 85.6 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 649..943 | 510..837 | 305 | 75.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..943 | 518..636 | 285 | 83.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 570..658 | 779..867 | 280 | 87.6 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 856..943 | 489..576 | 215 | 83 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 595..688 | 777..864 | 195 | 81.9 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 829..916 | 543..636 | 195 | 81.9 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 462..525 | 572..635 | 185 | 85.9 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 310..375 | 687..752 | 180 | 84.8 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 385..450 | 687..752 | 180 | 84.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:47:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17206473..17207347 | 15..889 | 4375 | 100 | Plus |
| X | 23542271 | X | 17207237..17207382 | 491..636 | 340 | 82.2 | Plus |
| X | 23542271 | X | 17207139..17207272 | 564..691 | 335 | 85.1 | Plus |
| X | 23542271 | X | 17207114..17207184 | 689..759 | 325 | 97.2 | Plus |
| X | 23542271 | X | 17206949..17207059 | 779..889 | 315 | 85.6 | Plus |
| X | 23542271 | X | 17206976..17207064 | 779..867 | 280 | 87.6 | Plus |
| X | 23542271 | X | 17207237..17207325 | 518..606 | 280 | 87.6 | Plus |
| X | 23542271 | X | 17207114..17207178 | 572..636 | 265 | 93.8 | Plus |
| X | 23542271 | X | 17206952..17207004 | 548..600 | 220 | 94.3 | Plus |
| X | 23542271 | X | 17207006..17207058 | 494..546 | 220 | 94.3 | Plus |
| X | 23542271 | X | 17207262..17207349 | 489..576 | 215 | 83 | Plus |
| X | 23542271 | X | 17207237..17207293 | 833..889 | 210 | 91.2 | Plus |
| X | 23542271 | X | 17207235..17207295 | 543..603 | 185 | 86.9 | Plus |
| 3L | 28110227 | 3L | 4483335..4483398 | 572..635 | 185 | 85.9 | Plus |
Blast to na_te.dros performed on 2015-02-13 02:47:49 has no hits.
BS08829.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:51:21 Download gff for
BS08829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-PA | 1..873 | 17..889 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:54:46 Download gff for
BS08829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-PA | 1..873 | 17..889 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:17:11 Download gff for
BS08829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 60..941 | 3..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:26:10 Download gff for
BS08829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 60..941 | 3..889 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:26:10 Download gff for
BS08829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17206466..17207347 | 3..889 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:17:11 Download gff for
BS08829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17100499..17101380 | 3..889 | 99 | | Plus |
BS08829.complete Sequence
1262 bp (1262 high quality bases) assembled on 2006-01-25
GenBank Submission: FJ636285
> BS08829.complete
GAAGTTATCAGTCGACATGAAGCTGTACGTTTGCGTTTCGCTGGCCCTTT
TGGCCCTTTCGGCACCAGTTCCTTCCGATGCCCTGTTGGGCGCCAAATTG
GCCCTGCTCAAGGCCATTGGCGGCGGTCTGGGTGGCGGCAGCTCCGGCGG
CGGTGGCTACTCCACCGGCAGTGGTGGCTATGGAGGCGGCTATGGCAGCG
GTGGATACTCCGGCGGCTACAATCAGGGATATTACAACCAGCCCAGCAGA
CCGGTGTACAACTCCGAATACGGCAGTTCCTCATCCTCTTCCGCCAGCAG
CAGCAGCAGCTATGGAGGCAGCTATGGCGGTGGTTATGGCGGCGGCTACG
GTGGTGGCGAGCAGGTCATCAAGGTCATCAAGGTGGTGGAGCAGCCCTCT
TACTCTTACGGACGGTCCTCTGGCTATGGTGGCAACTATGGAGGATACTC
GTCCAGTGCCTCGTCCAGCGCCAGCGCCAACTCATACTCCGCTCCCTCTG
TGAGCTACTCTGCTCCAGCTCCCGCTGTGACCTATTCCGCTCCTGCACCC
GCTGTGAGCTACTCTGCCCCAGCTCCCGCTGTGACCTACTCCGCTCCTGC
TCCTGCCCCAGCTGTGACCTACTCTGCTCCAGCTCCGGTGGTGCGCGTTC
AGGCCGCTCCAGCTGTGACCTACTCCGCTCCTGCTCCTGCTCCAGCTGTG
ACCTACTCCGCTCCTGCTCCTGCTCCAGCTGTGACCTACTCCGCTCCTGC
CCCCGCTCCTGTGGTGCGAGTACAGGCTGCTCCCGCTGTTACCTACTCCG
CTCCCGCTCCCGCTGTTACCTACTCCGCTCCCGCTCCCGCTGTGACCTAC
TCCGGTCCCGCTCCTGCTGTAACCTACTCCGCTCCTGCTCCAGTTCCAGT
GGTGCGTTACTCAGCCCCAGCTCCAGCTCCCATCAGCTACGCCCCTGCTC
CCGTGTCCTACGCCCCGCAGCCACAGAGCCAACAGGTGGTGAAGACCATC
AAGCTGATCGTCGATGAGGATCGTGCACCCGCCCAGGTTTACGGACCACC
AGCGGTGGAGTCCAGCTACTCCAGTGCTTCCTCCTCCGCTGCCGCTTCCG
CTGGTGGATACAACGGTGGCTACAACGGTGGATACAACGGTGGCTACAAC
GGTGGCTACAATGGCGGTTCCAATAGCGGCTTCTCAGGTGGATTCAATGG
CGGCTGGAAGCGTGGCGGTATCTTTGAGAAGCTGGTGGGCTGCTAGAAGC
TTTCTAGACCAT
BS08829.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:01:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-RA | 1230 | CG32564-PA | 1..1230 | 17..1246 | 6150 | 100 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 475..620 | 779..924 | 340 | 82.2 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 763..908 | 491..636 | 340 | 82.2 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 665..798 | 564..691 | 335 | 85.1 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 640..710 | 689..759 | 325 | 97.2 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 502..590 | 779..867 | 280 | 87.6 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 763..851 | 518..606 | 280 | 87.6 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 640..704 | 572..636 | 265 | 93.8 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 478..530 | 548..600 | 220 | 94.3 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 532..584 | 494..546 | 220 | 94.3 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 763..821 | 833..891 | 220 | 91.5 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 788..875 | 489..576 | 215 | 83 | Plus |
| CG32564-RA | 1230 | CG32564-PA | 761..821 | 543..603 | 185 | 86.9 | Plus |
| CG11350-RC | 1371 | CG11350-PC | 427..490 | 572..635 | 185 | 85.9 | Plus |
| CG11350-RC | 1371 | CG11350-PC | 275..340 | 687..752 | 180 | 84.8 | Plus |
| CG11350-RC | 1371 | CG11350-PC | 350..415 | 687..752 | 180 | 84.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:01:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-RA | 1448 | CG32564-RA | 67..1298 | 15..1246 | 6160 | 100 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 543..688 | 779..924 | 340 | 82.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..976 | 491..636 | 340 | 82.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 733..866 | 564..691 | 335 | 85.1 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 708..778 | 689..759 | 325 | 97.2 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 570..658 | 779..867 | 280 | 87.6 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..919 | 518..606 | 280 | 87.6 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 708..772 | 572..636 | 265 | 93.8 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 546..598 | 548..600 | 220 | 94.3 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 600..652 | 494..546 | 220 | 94.3 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 831..889 | 833..891 | 220 | 91.5 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 856..943 | 489..576 | 215 | 83 | Plus |
| CG32564-RA | 1448 | CG32564-RA | 829..889 | 543..603 | 185 | 86.9 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 462..525 | 572..635 | 185 | 85.9 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 310..375 | 687..752 | 180 | 84.8 | Plus |
| CG11350-RC | 1497 | CG11350-RC | 385..450 | 687..752 | 180 | 84.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:01:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17206473..17207704 | 15..1246 | 6160 | 100 | Plus |
| X | 23542271 | X | 17206949..17207094 | 779..924 | 340 | 82.2 | Plus |
| X | 23542271 | X | 17207237..17207382 | 491..636 | 340 | 82.2 | Plus |
| X | 23542271 | X | 17207139..17207272 | 564..691 | 335 | 85.1 | Plus |
| X | 23542271 | X | 17207114..17207184 | 689..759 | 325 | 97.2 | Plus |
| X | 23542271 | X | 17206976..17207064 | 779..867 | 280 | 87.6 | Plus |
| X | 23542271 | X | 17207237..17207325 | 518..606 | 280 | 87.6 | Plus |
| X | 23542271 | X | 17207114..17207178 | 572..636 | 265 | 93.8 | Plus |
| X | 23542271 | X | 17207237..17207295 | 833..891 | 220 | 91.5 | Plus |
| X | 23542271 | X | 17206952..17207004 | 548..600 | 220 | 94.3 | Plus |
| X | 23542271 | X | 17207006..17207058 | 494..546 | 220 | 94.3 | Plus |
| X | 23542271 | X | 17207262..17207349 | 489..576 | 215 | 83 | Plus |
| X | 23542271 | X | 17207235..17207295 | 543..603 | 185 | 86.9 | Plus |
| 3L | 28110227 | 3L | 4483335..4483398 | 572..635 | 185 | 85.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:01:06 has no hits.
BS08829.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:01:01 Download gff for
BS08829.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 1..1230 | 17..1246 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:38:11 Download gff for
BS08829.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 47..1290 | 3..1251 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:54 Download gff for
BS08829.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 69..1298 | 17..1246 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:01:01 Download gff for
BS08829.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 47..1290 | 3..1251 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:08:24 Download gff for
BS08829.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32564-RA | 69..1298 | 17..1246 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:08:24 Download gff for
BS08829.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17206475..17207704 | 17..1246 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:54 Download gff for
BS08829.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17100508..17101737 | 17..1246 | 100 | | Plus |
BS08829.pep Sequence
Translation from 16 to 1245
> BS08829.pep
MKLYVCVSLALLALSAPVPSDALLGAKLALLKAIGGGLGGGSSGGGGYST
GSGGYGGGYGSGGYSGGYNQGYYNQPSRPVYNSEYGSSSSSSASSSSSYG
GSYGGGYGGGYGGGEQVIKVIKVVEQPSYSYGRSSGYGGNYGGYSSSASS
SASANSYSAPSVSYSAPAPAVTYSAPAPAVSYSAPAPAVTYSAPAPAPAV
TYSAPAPVVRVQAAPAVTYSAPAPAPAVTYSAPAPAPAVTYSAPAPAPVV
RVQAAPAVTYSAPAPAVTYSAPAPAVTYSGPAPAVTYSAPAPVPVVRYSA
PAPAPISYAPAPVSYAPQPQSQQVVKTIKLIVDEDRAPAQVYGPPAVESS
YSSASSSAAASAGGYNGGYNGGYNGGYNGGYNGGSNSGFSGGFNGGWKRG
GIFEKLVGC*
BS08829.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:15:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32564-PA | 409 | CG32564-PA | 1..409 | 1..409 | 2128 | 100 | Plus |
| CG2962-PA | 376 | CG2962-PA | 1..374 | 1..345 | 466 | 37 | Plus |
| CG31626-PB | 285 | CG31626-PB | 55..274 | 147..351 | 438 | 51.5 | Plus |
| CG31626-PA | 285 | CG31626-PA | 55..274 | 147..351 | 438 | 51.5 | Plus |
| CG31626-PB | 285 | CG31626-PB | 25..266 | 153..362 | 435 | 49.6 | Plus |
| CG31626-PA | 285 | CG31626-PA | 25..266 | 153..362 | 435 | 49.6 | Plus |
| CG11584-PB | 662 | CG11584-PB | 204..468 | 144..353 | 367 | 46 | Plus |
| CG31626-PB | 285 | CG31626-PB | 125..280 | 149..282 | 322 | 51.8 | Plus |
| CG31626-PA | 285 | CG31626-PA | 125..280 | 149..282 | 322 | 51.8 | Plus |
| CG31626-PB | 285 | CG31626-PB | 142..280 | 148..273 | 284 | 53 | Plus |
| CG31626-PA | 285 | CG31626-PA | 142..280 | 148..273 | 284 | 53 | Plus |
| CG31626-PB | 285 | CG31626-PB | 193..280 | 147..245 | 201 | 53 | Plus |
| CG31626-PA | 285 | CG31626-PA | 193..280 | 147..245 | 201 | 53 | Plus |
