Clone Sequence Records
BS08851.3prime Sequence
938 bp (773 high quality bases) assembled on 2006-01-18
> BS08851.3prime
ATGGTCTAGAAAGCTTCTACGGCTCTATCTTCCGGATCTTCAGTCCACCG
CTGGGCCCACGCGGCCCCAAATGAGCGACTCCGGACGAAACGCCCGTCGT
CGTTGCGGCCGCCGTGCTCACCAGCTGGGGTATCAGTGCACCGCCATTAC
TGCTAGCCTCGCCGTTTCCATTGGTCGGACTTGAGACGGCTCCGTTGTGC
AGGCGCCGCTTCAGCACGAATCTTTTACCCGTGGGCGCTGCCGCAGTCGT
GGACGCAGGTGCTAACGCGGCGGTTTTCCCTGCCAACGCTGGCTCCTCGT
TCACGGGGTCCACTTCCATGTCGGTGCCGGCATTGTTTTCATCATGCATT
TCACTAGCTGGATCTTCGTCGTCATGGCCCTCCTCCTCCTCAAACTCGGC
ACTTTCCGTGTCCTCTGGATACTCCACCAACTGTCCATTCAGCGTTGGGA
ACTCGATCACTGGCAGTATGAGGCGTTGCTGCTGATTGCCCTCGTCCATC
AGCTGCTGGATGAGATTGGCAATGTCCTCGCGCTTTTTCGTCACTGTGAG
GAAGTCAAACCAGTTGGTCAGCTGCTTGATGGGCAGTCTGTAGTCTCTGA
TTGGCTCGCCGAAGAATTGCTCCACATACTGCAGCAGATACAGGCCGCAA
TCGGTGAAGTTGTTCTGCTGCGGCACCTTGACGCAGTGGCCCGGCATATT
GTCCTTGTTGAAGACGTGCGCCTGCGCATCCGGCTTCTTTACCCGGTACT
CGCATGTGAGATAATCTCGCAGTGTGGCCACCACGCGGCTACGCGATGCT
CCCGCCAGGGAATCAAAGATAAGGATTAAAGGTTGCTTTACGGCGGGCAC
ATCATCGGATGCAATATTCCTCGCTGGACCGGTGGCTTGTGGCTGCGAAC
TGGATAGACTGGGGGTGCTGGCTGTCGTGGAGGTGGGC
BS08851.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:15:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10107-PA | 5502 | CG10107-RA | 4632..5502 | 887..17 | 4355 | 100 | Minus |
| CG10107-PB | 2136 | CG10107-RB | 1266..2136 | 887..17 | 4355 | 100 | Minus |
| CG10107-PC | 5502 | CG10107-RC | 4632..5502 | 887..17 | 4355 | 100 | Minus |
| CG10107-PA | 5502 | CG10107-RA | 4581..4628 | 938..891 | 240 | 100 | Minus |
| CG10107-PB | 2136 | CG10107-RB | 1215..1262 | 938..891 | 240 | 100 | Minus |
| CG10107-PC | 5502 | CG10107-RC | 4581..4628 | 938..891 | 240 | 100 | Minus |
| CG12717-PA | 2046 | CG12717-RA | 1714..1755 | 652..611 | 160 | 95.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:21:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| velo-RD | 2490 | CG10107-RD | 1356..2277 | 938..17 | 4565 | 99.8 | Minus |
| velo-RC | 6333 | CG10107-RC | 5199..6120 | 938..17 | 4565 | 99.8 | Minus |
| velo-RB | 2691 | CG10107-RB | 1557..2478 | 938..17 | 4565 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:21:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6745031..6745622 | 347..938 | 2915 | 99.5 | Plus |
| 3L | 28110227 | 3L | 6744639..6744969 | 17..347 | 1655 | 100 | Plus |
| X | 23542271 | X | 12761456..12761756 | 478..778 | 560 | 79.1 | Plus |
| Y | 3667352 | Y | 3266245..3266526 | 778..497 | 555 | 79.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 18:21:43 has no hits.
BS08851.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:51:59 Download gff for
BS08851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10107-PB | 1215..2136 | 17..938 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:55:40 Download gff for
BS08851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10107-PB | 1215..2136 | 17..938 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:06:11 Download gff for
BS08851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| velo-RA | 4718..5639 | 17..938 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:07:37 Download gff for
BS08851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| velo-RB | 1557..2478 | 17..938 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:07:37 Download gff for
BS08851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6744639..6744968 | 17..346 | 100 | <- | Plus |
| 3L | 6745031..6745622 | 347..938 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:06:11 Download gff for
BS08851.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6737739..6738068 | 17..346 | 100 | <- | Plus |
| arm_3L | 6738131..6738722 | 347..938 | 99 | | Plus |
BS08851.5prime Sequence
898 bp (846 high quality bases) assembled on 2006-01-18
> BS08851.5prime
GAAGTTATCAGTCGACATGAACGATGAAGATTTCTCCCGTGGCGATGTTA
GAGACTTGTCGGATATACCCGAAGCGGATCAATTTTCCGCCTCCTTGAAA
TGCAGCTGCGTGCGTCTGGTGCCCTACAGATTCGAGATTACCGAGCCGGT
ATGCTTCACCACGAAGGGCGTTCGCATTGCTGGCATCCTGAAGGACAAGG
ACGAGAAGTTCGAGCTGAACATCCACAAACAGGAGGTGATCAAGGTGATA
GCCCACTTCGGCAACGTTGAGCCCGCCCAGCCACTGGTCACGCTATATCT
CCTCAAGACGTGTGCCGAATACGTAAAGAACCAGCTCAAGCTGCCCGACG
ATCAGCATCACGAACATACCGGCTTCAAGACGCACAGCTATCACACTCGC
CGTCTGATCCTGTTGTTCGACAGCATATCCGTGTCCGCCCGTGGTAATAT
CAAGTCTATGTTCAGTTGTGTAGACGAGATATCCTCGACAGATGCCGCCG
AGATTCTCGAGAGGATCGCGGACTCCGATCGCAAGACGCAGGACAAGAGC
TCGCAGCCACCGCCTCGCCAACTGAGAGCAGACGAGCAGGTTAGTCTGCT
GATGTATCCGCCGAAGGGAACGGGTGGCCTGTGCATACGCATGGAGGACT
TCGTCTGCCTCACAAAGGAGTCCTACCTCAACGACATCATCATTGACTTC
TATCTGCTCTGGCTGAGGAACACGCTGATTCCGGAGCCTCAACGCGAAAG
AACGCATATCTTCAGCACATTCTTTTACAAGAGACTCACAACGCTAACGC
GGCCAGCGGACATGAAGCAGACGGCAGCACAGAAGCGACACGCCAGGGTG
CAAAAGTGGACCAAGGGTGTGGACATCTTCGATAAGGATTTCATTATA
BS08851.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:15:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10107-PB | 2136 | CG10107-RB | 1..882 | 17..898 | 4410 | 100 | Plus |
| CG10107-PA | 5502 | CG10107-RA | 3377..4248 | 27..898 | 4360 | 100 | Plus |
| CG10107-PC | 5502 | CG10107-RC | 3377..4248 | 27..898 | 4360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:31:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| velo-RD | 2490 | CG10107-RD | 142..1023 | 17..898 | 4410 | 100 | Plus |
| velo-RB | 2691 | CG10107-RB | 343..1224 | 17..898 | 4410 | 100 | Plus |
| velo-RC | 6333 | CG10107-RC | 3995..4866 | 27..898 | 4360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:31:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6745955..6746487 | 898..366 | 2665 | 100 | Minus |
| 3L | 28110227 | 3L | 6746562..6746779 | 365..148 | 1090 | 100 | Minus |
| 3L | 28110227 | 3L | 6746868..6746991 | 151..28 | 620 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:31:44 has no hits.
BS08851.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:52:00 Download gff for
BS08851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10107-PB | 1..881 | 17..897 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:55:42 Download gff for
BS08851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10107-PB | 1..881 | 17..897 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:24:59 Download gff for
BS08851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| velo-RB | 192..1072 | 17..897 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:53:16 Download gff for
BS08851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| velo-RB | 343..1223 | 17..897 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:53:16 Download gff for
BS08851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6745956..6746487 | 366..897 | 100 | <- | Minus |
| 3L | 6746562..6746778 | 149..365 | 100 | <- | Minus |
| 3L | 6746871..6747000 | 20..148 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:24:59 Download gff for
BS08851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6739056..6739587 | 366..897 | 100 | <- | Minus |
| arm_3L | 6739662..6739878 | 149..365 | 100 | <- | Minus |
| arm_3L | 6739971..6740100 | 20..148 | 97 | | Minus |
BS08851.complete Sequence
2168 bp assembled on 2008-01-16
GenBank Submission: FJ636298
> BS08851.complete
GAAGTTATCAGTCGACATGAACGATGAAGATTTCTCCCGTGGCGATGTTA
GAGACTTGTCGGATATACCCGAAGCGGATCAATTTTCCGCCTCCTTGAAA
TGCAGCTGCGTGCGTCTGGTGCCCTACAGATTCGAGATTACCGAGCCGGT
ATGCTTCACCACGAAGGGCGTTCGCATTGCTGGCATCCTGAAGGACAAGG
ACGAGAAGTTCGAGCTGAACATCCACAAACAGGAGGTGATCAAGGTGATA
GCCCACTTCGGCAACGTTGAGCCCGCCCAGCCACTGGTCACGCTATATCT
CCTCAAGACGTGTGCCGAATACGTAAAGAACCAGCTCAAGCTGCCCGACG
ATCAGCATCACGAACATACCGGCTTCAAGACGCACAGCTATCACACTCGC
CGTCTGATCCTGTTGTTCGACAGCATATCCGTGTCCGCCCGTGGTAATAT
CAAGTCTATGTTCAGTTGTGTAGACGAGATATCCTCGACAGATGCCGCCG
AGATTCTCGAGAGGATCGCGGACTCCGATCGCAAGACGCAGGACAAGAGC
TCGCAGCCACCGCCTCGCCAACTGAGAGCAGACGAGCAGGTTAGTCTGCT
GATGTATCCGCCGAAGGGAACGGGTGGCCTGTGCATACGCATGGAGGACT
TCGTCTGCCTCACAAAGGAGTCCTACCTCAACGACATCATCATTGACTTC
TATCTGCTCTGGCTGAGGAACACGCTGATTCCGGAGCCTCAACGCGAAAG
AACGCATATCTTCAGCACATTCTTTTACAAGAGACTCACAACGCTAACGC
GGCCAGCGGACATGAAGCAGACGGCAGCACAGAAGCGACACGCCAGGGTG
CAAAAGTGGACCAAGGGTGTGGACATCTTCGATAAGGATTTCATTATAGT
GCCCATCAATGAGCAGTCGCATTGGTTCCTCGCCATCATTTGCTACCCGA
ACTTAAAAGGACCCGTCACGTTCGATACGAACCAGCCTGTAGAGCCGCAG
CAGTTGAAGCGCCCTCGAGGCAAGAAGGTGGCCCTGCAAATTGGTAACAC
CACCATAACCCCGCTGACGAAAAGGGCAGAGGGAGGACAGCTTCCAGCGG
CTCTGACGGCAGAGAACGTGTGTCGGATAGCAGACGATGAGAGCGAAAGG
GATGAGGCCGAAGGCGATGAGAGCGACATGGCCTCGGAGGATAGTGAAAA
CTCGAATTCGGCCAAGGAACCAGCGGCCACGCCCACCTCCACGACAGCCA
GCACCCCCAGTCTATCCAGTTCGCAGCCCACAGCCACCGGTCCAGCGAGG
AATATTGCATCCGATGATGTGCCCGCCGTAAAGCAACCTTTAATCCTTAT
CTTTGATTCCCTGGCGGGAGCATCGCGTAGCCGCGTGGTGGCCACACTGC
GAGATTATCTCACATGCGAGTACCGGGTAAAGAAGCCGGATGCGCAGGCG
CACGTCTTCAACAAGGACAATATGCCGGGCCACTGCGTCAAGGTGCCGCA
GCAGAACAACTTCACCGATTGCGGCCTGTATCTGCTGCAGTATGTGGAGC
AATTCTTCGGCGAGCCAATCAGAGACTACAGACTGCCCATCAAGCAGCTG
ACCAACTGGTTTGACTTCCTCACAGTGACGAAAAAGCGCGAGGACATTGC
CAATCTCATCCAGCAGCTGATGGACGAGGGCAATCAGCAGCAACGCCTCA
TACTGCCAGTGATCGAGTTCCCAACGCTGAATGGACAGTTGGTGGAGTAT
CCAGAGGACACGGAAAGTGCCGAGTTTGAGGAGGAGGAGGGCCATGACGA
CGAAGATCCAGCTAGTGAAATGCATGATGAAAACAATGCCGGCACCGACA
TGGAAGTGGACCCCGTGAACGAGGAGCCAGCGTTGGCAGGGAAAACCGCC
GCGTTAGCACCTGCGTCCACGACTGCGGCAGCGCCCACGGGTAAAAGATT
CGTGCTGAAGCGGCGCCTGCACAACGGAGCCGTCTCAAGTCCGACCAATG
GAAACGGCGAGGCTAGCAGTAATGGCGGTGCACTGATACCCCAGCTGGTG
AGCACGGCGGCCGCAACGACGACGGGCGTTTCGTCCGGAGTCGCTCATTT
GGGGCCGCGTGGGCCCAGCGGTGGACTGAAGATCCGGAAGATAGAGCCGT
AGAAGCTTTCTAGACCAT
BS08851.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:19:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| velo-RD | 2136 | CG10107-PD | 1..2136 | 17..2152 | 10680 | 100 | Plus |
| velo-RB | 2136 | CG10107-PB | 1..2136 | 17..2152 | 10680 | 100 | Plus |
| velo-RC | 5502 | CG10107-PC | 3377..5502 | 27..2152 | 10630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:19:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| velo-RD | 2490 | CG10107-RD | 142..2277 | 17..2152 | 10680 | 100 | Plus |
| velo-RB | 2691 | CG10107-RB | 343..2478 | 17..2152 | 10680 | 100 | Plus |
| velo-RC | 6333 | CG10107-RC | 3995..6120 | 27..2152 | 10630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:19:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6745031..6746487 | 1822..366 | 7285 | 100 | Minus |
| 3L | 28110227 | 3L | 6744639..6744969 | 2152..1822 | 1655 | 100 | Minus |
| 3L | 28110227 | 3L | 6746562..6746779 | 365..148 | 1090 | 100 | Minus |
| 3L | 28110227 | 3L | 6746868..6746991 | 151..28 | 620 | 100 | Minus |
| X | 23542271 | X | 12761456..12761756 | 1691..1391 | 560 | 79.1 | Minus |
| Y | 3667352 | Y | 3266245..3266526 | 1391..1672 | 555 | 79.8 | Plus |
| Y | 3667352 | Y | 3236057..3236338 | 1672..1391 | 540 | 79.4 | Minus |
| Ymm | 880023 | Ymm | 328317..328617 | 1691..1391 | 500 | 77.7 | Minus |
| Y | 3667352 | Y | 3212426..3212677 | 1440..1691 | 495 | 79.8 | Plus |
| Ymm | 880023 | Ymm | 542331..542582 | 1440..1691 | 495 | 79.8 | Plus |
| Y | 3667352 | Y | 3241683..3241983 | 1391..1691 | 485 | 77.4 | Plus |
| Ymm | 880023 | Ymm | 315982..316282 | 1691..1391 | 485 | 77.4 | Minus |
| Ymm | 880023 | Ymm | 332390..332690 | 1691..1391 | 485 | 77.4 | Minus |
| Ymm | 880023 | Ymm | 324243..324543 | 1691..1391 | 485 | 77.4 | Minus |
| Ymm | 880023 | Ymm | 336793..337046 | 1391..1644 | 475 | 79.1 | Plus |
| U | 3151297 | U | 1283661..1283914 | 1391..1644 | 475 | 79.1 | Plus |
| Ymm | 880023 | Ymm | 320921..321221 | 1691..1391 | 470 | 77.1 | Minus |
| Y | 3667352 | Y | 3093502..3093764 | 1429..1691 | 445 | 77.9 | Plus |
| Y | 3667352 | Y | 3203934..3204196 | 1691..1429 | 445 | 77.9 | Minus |
| Y | 3667352 | Y | 3229477..3229737 | 1691..1429 | 440 | 78.7 | Minus |
| U | 3151297 | U | 2461026..2461207 | 1672..1491 | 430 | 82.4 | Minus |
| Ymm | 880023 | Ymm | 341674..341934 | 1429..1691 | 425 | 78.3 | Plus |
| Ymm | 880023 | Ymm | 318944..319206 | 1691..1429 | 415 | 77.2 | Minus |
| Y | 3667352 | Y | 3273194..3273470 | 1391..1668 | 395 | 77 | Plus |
| Y | 3667352 | Y | 3113738..3114037 | 1691..1391 | 375 | 75.7 | Minus |
| Y | 3667352 | Y | 3137670..3137969 | 1691..1391 | 375 | 75.7 | Minus |
| Y | 3667352 | Y | 3165009..3165308 | 1391..1691 | 375 | 75.7 | Plus |
| Y | 3667352 | Y | 3185328..3185627 | 1391..1691 | 375 | 75.7 | Plus |
| Y | 3667352 | Y | 3259308..3259607 | 1691..1391 | 375 | 75.7 | Minus |
| Y | 3667352 | Y | 3191268..3191434 | 1557..1391 | 355 | 80.8 | Minus |
| Ymm | 880023 | Ymm | 653472..653715 | 1691..1448 | 330 | 77.6 | Minus |
| Y | 3667352 | Y | 3108122..3108257 | 1491..1626 | 290 | 80.9 | Plus |
| Y | 3667352 | Y | 3061153..3061306 | 1538..1691 | 275 | 78.6 | Plus |
| Ymm | 880023 | Ymm | 339681..339834 | 1538..1691 | 275 | 78.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:19:53 has no hits.
BS08851.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:09:50 Download gff for
BS08851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10107-RB | 1..2136 | 17..2152 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:34:10 Download gff for
BS08851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10107-RB | 192..2327 | 17..2152 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:39:48 Download gff for
BS08851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| velo-RB | 192..2327 | 17..2152 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:09:50 Download gff for
BS08851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10107-RB | 192..2327 | 17..2152 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:15 Download gff for
BS08851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| velo-RB | 343..2478 | 17..2152 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:05:15 Download gff for
BS08851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6746562..6746778 | 149..365 | 100 | <- | Minus |
| 3L | 6746871..6747000 | 20..148 | 97 | | Minus |
| 3L | 6744639..6744968 | 1823..2152 | 100 | <- | Minus |
| 3L | 6745031..6746487 | 366..1822 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:39:48 Download gff for
BS08851.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6737739..6738068 | 1823..2152 | 100 | <- | Minus |
| arm_3L | 6738131..6739587 | 366..1822 | 100 | <- | Minus |
| arm_3L | 6739662..6739878 | 149..365 | 100 | <- | Minus |
| arm_3L | 6739971..6740100 | 20..148 | 97 | | Minus |
BS08851.pep Sequence
Translation from 16 to 2151
> BS08851.pep
MNDEDFSRGDVRDLSDIPEADQFSASLKCSCVRLVPYRFEITEPVCFTTK
GVRIAGILKDKDEKFELNIHKQEVIKVIAHFGNVEPAQPLVTLYLLKTCA
EYVKNQLKLPDDQHHEHTGFKTHSYHTRRLILLFDSISVSARGNIKSMFS
CVDEISSTDAAEILERIADSDRKTQDKSSQPPPRQLRADEQVSLLMYPPK
GTGGLCIRMEDFVCLTKESYLNDIIIDFYLLWLRNTLIPEPQRERTHIFS
TFFYKRLTTLTRPADMKQTAAQKRHARVQKWTKGVDIFDKDFIIVPINEQ
SHWFLAIICYPNLKGPVTFDTNQPVEPQQLKRPRGKKVALQIGNTTITPL
TKRAEGGQLPAALTAENVCRIADDESERDEAEGDESDMASEDSENSNSAK
EPAATPTSTTASTPSLSSSQPTATGPARNIASDDVPAVKQPLILIFDSLA
GASRSRVVATLRDYLTCEYRVKKPDAQAHVFNKDNMPGHCVKVPQQNNFT
DCGLYLLQYVEQFFGEPIRDYRLPIKQLTNWFDFLTVTKKREDIANLIQQ
LMDEGNQQQRLILPVIEFPTLNGQLVEYPEDTESAEFEEEEGHDDEDPAS
EMHDENNAGTDMEVDPVNEEPALAGKTAALAPASTTAAAPTGKRFVLKRR
LHNGAVSSPTNGNGEASSNGGALIPQLVSTAAATTTGVSSGVAHLGPRGP
SGGLKIRKIEP*
BS08851.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:27:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| velo-PD | 711 | CG10107-PD | 1..711 | 1..711 | 3700 | 100 | Plus |
| velo-PB | 711 | CG10107-PB | 1..711 | 1..711 | 3700 | 100 | Plus |
| velo-PC | 1833 | CG10107-PC | 1126..1833 | 4..711 | 3679 | 99.9 | Plus |
| velo-PA | 1833 | CG10107-PA | 1126..1833 | 4..711 | 3679 | 99.9 | Plus |
| CG12717-PB | 681 | CG12717-PB | 504..660 | 432..590 | 595 | 73.6 | Plus |
