Clone Sequence Records
BS08894.3prime Sequence
934 bp (783 high quality bases) assembled on 2006-01-18
> BS08894.3prime
ATGGTCTAGAAAGCTTTTACGCGGTCTCCACATAGTTGGCCGGATACAGT
CCGACGCGCCCATTCATGCGTCCCTTGCACCAGCCTTGTTCGTCTTCATC
TTCGAGCTTCTCGAAAACATCACCTTGCTTGAATGTGAGCTCATCACTTT
CAGCGCCCTCGTAATCATACAGCGCTTTGACCGGCACGCCTGGCTCACCG
TTGTCCACCAGCACGTTGTCGCTCTCGTCCCACTCCTCCTCCTCGTCGAA
TGGATTTGCATCGACTTTGCCGTTGCCGTTGGTTACGCTCGAGTTGCGAT
TGGATGCCGCTGACGCCGCTGTTGCTGCTGCCGTTGCCGTCGCAGCGCCG
GCAACCGCCGCCGATGTTTTGGCTTCCGATGTGGTGACTGAGGATTGCGT
GGTCGCTATTTCGCTCTTCACACTCGCTCTGCTGCTGACACTGCTCAAGG
TGCTGGTGTTCTTCTTCAGGCTGTTTGTCTGGGGGTATTCGTGCACATCC
TCGGCCACAGGTCGCTGGTTGATGAGCGTGATGGGTGCTGCCGGCAGTGC
CTCTTTTGATTTGTTGCCCTTGGCAATGTCACGGAACTCCTCCGTATATT
CCACAAATGATGGCCAATTCATGGCCATGTTAATGCCATGATTGTTCGAC
CACCATTTTAGGTCTTTCTGCTGGTCTGCATTGTTGATCGTGTGGGAGAA
CTCCTCGTAGATTTGGGGCAGGCTTTGCACTTTTGTGAGGTCCAGGCACG
AGTGCACGTTGAACAGGATTTCTTTGAAGAACTGCAAACGCGTCTTCTCA
AAGGTTTGGCACTTTTCAAACACGGATGTCATGTCCTCGATGTACACCGA
TTTGTATTTGGTGATTTCGGCAATCGCCTGCTCGTACTTTTCCCGGCACT
TTTGCACTTGATCTTTGGTCTTTTGCACTCGATC
BS08894.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:16:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33094-PB | 1485 | Synd-RB | 568..1485 | 934..17 | 4565 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:00:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Synd-RB | 2022 | CG33094-RB | 646..1563 | 934..17 | 4575 | 99.9 | Minus |
Synd-RD | 2287 | CG33094-RD | 646..1566 | 934..17 | 4535 | 99.6 | Minus |
Synd-RC | 2281 | CG33094-RC | 640..1560 | 934..17 | 4535 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:00:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20838675..20838887 | 494..282 | 1050 | 99.5 | Minus |
3R | 32079331 | 3R | 20838050..20838261 | 934..723 | 1045 | 99.5 | Minus |
3R | 32079331 | 3R | 20839058..20839218 | 281..121 | 805 | 100 | Minus |
3R | 32079331 | 3R | 20838323..20838446 | 724..601 | 620 | 100 | Minus |
3R | 32079331 | 3R | 20838512..20838624 | 602..490 | 565 | 100 | Minus |
3R | 32079331 | 3R | 20839289..20839397 | 125..17 | 545 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 18:00:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2275..2525 | 524..267 | 192 | 56.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..6897 | 412..268 | 186 | 62.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2420 | 381..267 | 167 | 61.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6752..6820 | 336..267 | 158 | 71.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6798 | 336..268 | 153 | 71 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6768..6876 | 374..268 | 153 | 61.5 | Minus |
3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 3723..3786 | 271..332 | 144 | 71.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6841 | 390..267 | 142 | 59.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6859 | 407..267 | 139 | 58.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1498..1590 | 397..300 | 126 | 63.3 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1527..1603 | 342..266 | 124 | 65.8 | Minus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3219..3309 | 399..318 | 119 | 64.8 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1088..1163 | 381..306 | 119 | 61.8 | Minus |
BS08894.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:53:15 Download gff for
BS08894.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Synd-PB | 568..1485 | 17..934 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:57:23 Download gff for
BS08894.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33094-PB | 568..1485 | 17..934 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 12:32:49 Download gff for
BS08894.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Synd-RB | 646..1565 | 13..934 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:32:47 Download gff for
BS08894.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Synd-RB | 646..1565 | 13..934 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:32:47 Download gff for
BS08894.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20838050..20838261 | 723..934 | 99 | -> | Minus |
3R | 20838325..20838445 | 602..722 | 100 | -> | Minus |
3R | 20838513..20838623 | 491..601 | 100 | -> | Minus |
3R | 20838679..20838887 | 282..490 | 100 | -> | Minus |
3R | 20839058..20839215 | 124..281 | 100 | -> | Minus |
3R | 20839291..20839399 | 13..123 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 12:32:49 Download gff for
BS08894.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16663772..16663983 | 723..934 | 99 | -> | Minus |
arm_3R | 16664047..16664167 | 602..722 | 100 | -> | Minus |
arm_3R | 16664235..16664345 | 491..601 | 100 | -> | Minus |
arm_3R | 16664401..16664609 | 282..490 | 100 | -> | Minus |
arm_3R | 16664780..16664937 | 124..281 | 100 | -> | Minus |
arm_3R | 16665013..16665121 | 13..123 | 98 | | Minus |
BS08894.5prime Sequence
873 bp (839 high quality bases) assembled on 2006-01-18
> BS08894.5prime
GAAGTTATCAGTCGACATGTCCCACCACAGCGATGATCAGCTCCTCCAGG
CTGGAAGCGATTCCTTCTGGGAGCCCGGCAACTACAAACGCACCACCAAG
CGGATCGAGGATGGTTACAAACTCTGCAATGACCTACAGCAACTGATTCA
GGAGCGTGCCGACATCGAGAAGGGATATGCGAAAAGCCTGCGCACCTGGT
CAAAGAAATGGGGTGAACTCATTGAGAAAGGCCCGGAATACGGAACCACG
GAGGCAGCCTGGAAGGGCGTTCTGACGGAATCGGAACGCATCTCCGACGT
TCACATGAAGATCAAGGACAATCTCTGCAACGATGTGAACAGCCAGATAA
AGACGTGGCAGAAGGAGAACTACCACCACACGCTTATGCAGATCAAGGAG
CGCAAGGACCTGGAGGATCTGTTCAAGAAGGCCCAGAAACCCTGGGCCAA
GCTGCTGGCAAAGGTCGAGAAGGCCAAAGCGGACTACCATTCGGCCTGCA
AGACGGAGCGCAGTGCTACCAATCAGGAACGCAATGCCAATGCCGATAGC
TCGTTGTCGCCGGATCAGGTGAAGAAAATGCACGATCGAGTGCAAAAGAC
CAAAGATCAAGTGCAAAAGTGCCGGGAAAAGTACGAGCAGGCGATTGCCG
AAATCACCAAATACAATTCGGTGTACATCGAGGACATGACATCCGTGTTT
GAAAAGTGCCAAACCTTTGAGAAGACGCGTTTGCAGTTCTTCAAAGAAAT
CCTGTTCAACGTGCACTCGTGCCTGGACCTCACAAAAGTGCAAAGCCTGC
CCCAAATCTACGAGGAGTTCTCCCACACGATCAACAATGCAGACCAGCAG
AAAGACCTAAAATGGTGGTCGAA
BS08894.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:16:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33094-PB | 1485 | Synd-RB | 1..857 | 17..873 | 4285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:31:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Synd-RD | 2287 | CG33094-RD | 79..935 | 17..873 | 4285 | 100 | Plus |
Synd-RC | 2281 | CG33094-RC | 73..929 | 17..873 | 4285 | 100 | Plus |
Synd-RB | 2022 | CG33094-RB | 79..935 | 17..873 | 4285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:31:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20837583..20837924 | 229..570 | 1710 | 100 | Plus |
3R | 32079331 | 3R | 20838033..20838261 | 567..795 | 1145 | 100 | Plus |
3R | 32079331 | 3R | 20835875..20835985 | 121..231 | 555 | 100 | Plus |
3R | 32079331 | 3R | 20835228..20835331 | 17..120 | 520 | 100 | Plus |
3R | 32079331 | 3R | 20838323..20838402 | 794..873 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 01:31:36 has no hits.
BS08894.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 09:53:17 Download gff for
BS08894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Synd-PB | 1..855 | 17..871 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 10:57:25 Download gff for
BS08894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33094-PB | 1..855 | 17..871 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 19:48:37 Download gff for
BS08894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Synd-RB | 69..935 | 4..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:23:45 Download gff for
BS08894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Synd-RB | 69..935 | 4..873 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:23:45 Download gff for
BS08894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20835222..20835331 | 9..120 | 97 | -> | Plus |
3R | 20835875..20835984 | 121..230 | 100 | -> | Plus |
3R | 20837585..20837922 | 231..568 | 100 | -> | Plus |
3R | 20838035..20838261 | 569..795 | 100 | -> | Plus |
3R | 20838325..20838402 | 796..873 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 19:48:37 Download gff for
BS08894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16660944..16661053 | 9..120 | 97 | -> | Plus |
arm_3R | 16661597..16661706 | 121..230 | 100 | -> | Plus |
arm_3R | 16663757..16663983 | 569..795 | 100 | -> | Plus |
arm_3R | 16663307..16663644 | 231..568 | 100 | -> | Plus |
arm_3R | 16664047..16664124 | 796..873 | 100 | | Plus |
BS08894.complete Sequence
1517 bp (1517 high quality bases) assembled on 2006-01-25
GenBank Submission: FJ636315
> BS08894.complete
GAAGTTATCAGTCGACATGTCCCACCACAGCGATGATCAGCTCCTCCAGG
CTGGAAGCGATTCCTTCTGGGAGCCCGGCAACTACAAACGCACCACCAAG
CGGATCGAGGATGGTTACAAACTCTGCAATGACCTACAGCAACTGATTCA
GGAGCGTGCCGACATCGAGAAGGGATATGCGAAAAGCCTGCGCACCTGGT
CAAAGAAATGGGGTGAACTCATTGAGAAAGGCCCGGAATACGGAACCACG
GAGGCAGCCTGGAAGGGCGTTCTGACGGAATCGGAACGCATCTCCGACGT
TCACATGAAGATCAAGGACAATCTCTGCAACGATGTGAACAGCCAGATAA
AGACGTGGCAGAAGGAGAACTACCACCACACGCTTATGCAGATCAAGGAG
CGCAAGGACCTGGAGGATCTGTTCAAGAAGGCCCAGAAACCCTGGGCCAA
GCTGCTGGCAAAGGTCGAGAAGGCCAAAGCGGACTACCATTCGGCCTGCA
AGACGGAGCGCAGTGCTACCAATCAGGAACGCAATGCCAATGCCGATAGC
TCGTTGTCGCCGGATCAGGTGAAGAAAATGCACGATCGAGTGCAAAAGAC
CAAAGATCAAGTGCAAAAGTGCCGGGAAAAGTACGAGCAGGCGATTGCCG
AAATCACCAAATACAATTCGGTGTACATCGAGGACATGACATCCGTGTTT
GAAAAGTGCCAAACCTTTGAGAAGACGCGTTTGCAGTTCTTCAAAGAAAT
CCTGTTCAACGTGCACTCGTGCCTGGACCTCACAAAAGTGCAAAGCCTGC
CCCAAATCTACGAGGAGTTCTCCCACACGATCAACAATGCAGACCAGCAG
AAAGACCTAAAATGGTGGTCGAACAATCATGGCATTAACATGGCCATGAA
TTGGCCATCATTTGTGGAATATACGGAGGAGTTCCGTGACATTGCCAAGG
GCAACAAATCAAAAGAGGCACTGCCGGCAGCACCCATCACGCTCATCAAC
CAGCGACCTGTGGCCGAGGATGTGCACGAATACCCCCAGACAAACAGCCT
GAAGAAGAACACCAGCACCTTGAGCAGTGTCAGCAGCAGAGCGAGTGTGA
AGAGCGAAATAGCGACCACGCAATCCTCAGTCACCACATCGGAAGCCAAA
ACATCGGCGGCGGTTGCCGGCGCTGCGACGGCAACGGCAGCAGCAACAGC
GGCGTCAGCGGCATCCAATCGCAACTCGAGCGTAACCAACGGCAACGGCA
AAGTCGATGCAAATCCATTCGACGAGGAGGAGGAGTGGGACGAGAGCGAC
AACGTGCTGGTGGACAACGGTGAGCCAGGCGTGCCGGTCAAAGCGCTGTA
TGATTACGAGGGCGCTGAAAGTGATGAGCTCACATTCAAGCAAGGTGATG
TTTTCGAGAAGCTCGAAGATGAAGACGAACAAGGCTGGTGCAAGGGACGC
ATGAATGGGCGCGTCGGACTGTATCCGGCCAACTATGTGGAGACCGCGTA
AAAGCTTTCTAGACCAT
BS08894.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:53:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Synd-RB | 1485 | CG33094-PB | 1..1485 | 17..1501 | 7425 | 100 | Plus |
Synd-RD | 1488 | CG33094-PD | 1..1488 | 17..1501 | 7360 | 99.8 | Plus |
Synd-RC | 1488 | CG33094-PC | 1..1488 | 17..1501 | 7360 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:53:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Synd-RB | 2022 | CG33094-RB | 79..1563 | 17..1501 | 7425 | 100 | Plus |
Synd-RD | 2287 | CG33094-RD | 79..1566 | 17..1501 | 7360 | 99.8 | Plus |
Synd-RC | 2281 | CG33094-RC | 73..1560 | 17..1501 | 7360 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:53:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20837583..20837924 | 229..570 | 1710 | 100 | Plus |
3R | 32079331 | 3R | 20838033..20838261 | 567..795 | 1145 | 100 | Plus |
3R | 32079331 | 3R | 20838675..20838887 | 1024..1236 | 1050 | 99.5 | Plus |
3R | 32079331 | 3R | 20839058..20839218 | 1237..1397 | 805 | 100 | Plus |
3R | 32079331 | 3R | 20838323..20838446 | 794..917 | 620 | 100 | Plus |
3R | 32079331 | 3R | 20838512..20838624 | 916..1028 | 565 | 100 | Plus |
3R | 32079331 | 3R | 20835875..20835985 | 121..231 | 555 | 100 | Plus |
3R | 32079331 | 3R | 20839289..20839397 | 1393..1501 | 545 | 100 | Plus |
3R | 32079331 | 3R | 20835228..20835331 | 17..120 | 520 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 20:53:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2275..2525 | 994..1251 | 192 | 56.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..6897 | 1106..1250 | 186 | 62.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2420 | 1137..1251 | 167 | 61.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6752..6820 | 1182..1251 | 158 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6798 | 1182..1250 | 153 | 71 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6768..6876 | 1144..1250 | 153 | 61.5 | Plus |
3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 3723..3786 | 1247..1186 | 144 | 71.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6841 | 1128..1251 | 142 | 59.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6859 | 1111..1251 | 139 | 58.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1498..1590 | 1121..1218 | 126 | 63.3 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3219..3309 | 1119..1200 | 119 | 64.8 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1088..1163 | 1137..1212 | 119 | 61.8 | Plus |
BS08894.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:00:37 Download gff for
BS08894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Synd-RB | 1..1485 | 17..1501 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:37:38 Download gff for
BS08894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Synd-RB | 83..1579 | 4..1505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:15:17 Download gff for
BS08894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Synd-RB | 79..1561 | 17..1499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:00:37 Download gff for
BS08894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Synd-RB | 83..1579 | 4..1505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:24 Download gff for
BS08894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Synd-RB | 79..1561 | 17..1499 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:24 Download gff for
BS08894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20835228..20835331 | 17..120 | 100 | -> | Plus |
3R | 20835875..20835984 | 121..230 | 100 | -> | Plus |
3R | 20837585..20837922 | 231..568 | 100 | -> | Plus |
3R | 20838035..20838261 | 569..795 | 100 | -> | Plus |
3R | 20838325..20838445 | 796..916 | 100 | -> | Plus |
3R | 20838513..20838623 | 917..1027 | 100 | -> | Plus |
3R | 20838679..20838887 | 1028..1236 | 100 | -> | Plus |
3R | 20839058..20839215 | 1237..1394 | 100 | -> | Plus |
3R | 20839291..20839395 | 1395..1499 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:15:17 Download gff for
BS08894.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16664235..16664345 | 917..1027 | 100 | -> | Plus |
arm_3R | 16660950..16661053 | 17..120 | 100 | -> | Plus |
arm_3R | 16661597..16661706 | 121..230 | 100 | -> | Plus |
arm_3R | 16663307..16663644 | 231..568 | 100 | -> | Plus |
arm_3R | 16663757..16663983 | 569..795 | 100 | -> | Plus |
arm_3R | 16664047..16664167 | 796..916 | 100 | -> | Plus |
arm_3R | 16664401..16664609 | 1028..1236 | 100 | -> | Plus |
arm_3R | 16664780..16664937 | 1237..1394 | 100 | -> | Plus |
arm_3R | 16665013..16665117 | 1395..1499 | 100 | | Plus |
BS08894.pep Sequence
Translation from 16 to 1500
> BS08894.pep
MSHHSDDQLLQAGSDSFWEPGNYKRTTKRIEDGYKLCNDLQQLIQERADI
EKGYAKSLRTWSKKWGELIEKGPEYGTTEAAWKGVLTESERISDVHMKIK
DNLCNDVNSQIKTWQKENYHHTLMQIKERKDLEDLFKKAQKPWAKLLAKV
EKAKADYHSACKTERSATNQERNANADSSLSPDQVKKMHDRVQKTKDQVQ
KCREKYEQAIAEITKYNSVYIEDMTSVFEKCQTFEKTRLQFFKEILFNVH
SCLDLTKVQSLPQIYEEFSHTINNADQQKDLKWWSNNHGINMAMNWPSFV
EYTEEFRDIAKGNKSKEALPAAPITLINQRPVAEDVHEYPQTNSLKKNTS
TLSSVSSRASVKSEIATTQSSVTTSEAKTSAAVAGAATATAAATAASAAS
NRNSSVTNGNGKVDANPFDEEEEWDESDNVLVDNGEPGVPVKALYDYEGA
ESDELTFKQGDVFEKLEDEDEQGWCKGRMNGRVGLYPANYVETA*
BS08894.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:30:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Synd-PB | 494 | CG33094-PB | 1..494 | 1..494 | 2593 | 100 | Plus |
Synd-PD | 495 | CG33094-PD | 1..495 | 1..494 | 2581 | 99.8 | Plus |
Synd-PC | 495 | CG33094-PC | 1..495 | 1..494 | 2581 | 99.8 | Plus |
Abp1-PA | 531 | CG10083-PA | 355..528 | 320..492 | 158 | 28.4 | Plus |
Amph-PB | 502 | CG8604-PB | 153..498 | 172..490 | 156 | 23.4 | Plus |