Clone BS09136 Report

Search the DGRC for BS09136

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:91
Well:36
Vector:pDNR-Dual
Associated Gene/TranscriptCG32633-RA
Protein status:BS09136.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS09136.3prime Sequence

888 bp (861 high quality bases) assembled on 2006-01-24

> BS09136.3prime
ATGGTCTAGAAAGCTTCTAGATCCTCACCAGAACCTCGTAATTCTCCAGA
CGCACCTCCTCGCCACCGAATGGGATGTAGATGCAGCCGTGCGAGGGATG
GATCTTGCCCACACTCAAGCTGTCGCAGTAGATGGCCCTGCCGACGTAGA
GGGGCTCCCCGTCGACATTCGGACCGGAGGACAGGGCTCCGGGAGCCACA
TTTCCGTGCGAGGCCGGAACCCAACGGAATCCGGATCCCGTCAGCACCTG
GACGTCGGTGAGCTCGTGCTCCGCCTGGGCATAGGCGGCATAGGCTTTCC
CCTTCGCCGGCACCACTTTGGCTGGCAGCAGATCACCATTGCGGAACACC
CTGCCCACGTAGATGGTGTCCCCGTTGGAATCGTGCCCAGCAACCAGAGC
TCCATCCGGAATATTTGTTGCGGTGGTGTCGATCCAACGTTCCGGCTGGC
ACAGCACCTCGTAGGCAAAGATCTTAACCTCATCGGAATCGTAGGGAATA
TACAGGCAGCCGTGGGATGGATGCACCTTGCCCATGGTTAAGCTGCCGGC
ATGATAACCCCTGCCCGCATACAAATACTCGCCGTCCACATTCCGACCAA
CTTTGACGGCGCCCGGCGGCACCTCCCCGTTCTCCGCCGACAGCCACTCG
TAGTTGTAGCCGGAAAGCACCTCGTAGTTCTCCAGCTCGTGCTCCTCGCG
CGCATACGCCACGTAGGCCTTGCCCTTGTTGGGAATCACCTTCGCCGGCA
GCATGTCGTTGGAGAAGAAGGCACGGCCCACGTAGATGGTGTCCCCGTCC
GAATCGTGACCAGCCACCACGGCATTCGGCGGCACGCTGCCGTTGCTGAA
GTGCATCCATCTGTGGTCTGCCATGTCGACTGATAACT

BS09136.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:21:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG32633-PA 858 CG32633-RA 1..858 874..17 4290 100 Minus
CG31086-PA 447 CG31086-RA 322..419 553..456 290 91.8 Minus
CG31086-PA 447 CG31086-RA 52..173 823..702 260 88.5 Minus
CG31086-PA 447 CG31086-RA 213..272 662..603 150 90 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:58:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG32633-RB 956 CG32633-RB 41..899 874..16 4295 100 Minus
CG32633-RA 1441 CG32633-RA 41..899 874..16 4295 100 Minus
CG31323-RA 3489 CG31323-RA 1922..2336 865..451 1070 84.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:58:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13561963..13562817 870..16 4275 100 Minus
3R 32079331 3R 26185782..26186154 823..451 1055 85.5 Minus
2R 25286936 2R 12950953..12951023 51..121 190 84.5 Plus
Blast to na_te.dros performed on 2015-02-12 10:58:28 has no hits.

BS09136.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:00:21 Download gff for BS09136.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32633-PA 1..858 17..874 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:07:09 Download gff for BS09136.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32633-PA 1..858 17..874 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:25:28 Download gff for BS09136.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32633-RA 36..899 16..881 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:35:29 Download gff for BS09136.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32633-RA 36..899 16..881 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:35:29 Download gff for BS09136.3prime
Subject Subject Range Query Range Percent Splice Strand
X 13561963..13562817 16..870 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:25:28 Download gff for BS09136.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13455996..13456850 16..870 100   Minus

BS09136.5prime Sequence

888 bp (791 high quality bases) assembled on 2006-01-24

> BS09136.5prime
GAAGTTATCAGTCGACATGGCAGACCACAGATGGATGCACTTCAGCAACG
GCAGCGTGCCGCCGAATGCCGTGGTGGCTGGTCACGATTCGGACGGGGAC
ACCATCTACGTGGGCCGTGCCTTCTTCTCCAACGACATGCTGCCGGCGAA
GGTGATTCCCAACAAGGGCAAGGCCTACGTGGCGTATGCGCGCGAGGAGC
ACGAGCTGGAGAACTACGAGGTGCTTTCCGGCTACAACTACGAGTGGCTG
TCGGCGGAGAACGGGGAGGTGCCGCCGGGCGCCGTCAAAGTTGGTCGGAA
TGTGGACGGCGAGTATTTGTATGCGGGCAGGGGTTATCATGCCGGCAGCT
TAACCATGGGCAAGGTGCATCCATCCCACGGCTGCCTGTATATTCCCTAC
GATTCCGATGAGGTTAAGATCTTTGCCTACGAGGTGCTGTGCCAGCCGGA
ACGTTGGATCGACACCACCGCAACAAATATTCCGGATGGAGCTCTGGTTG
CTGGGCACGATTCCAACGGGGACACCATCTACGTGGGCAGGGTGTTCCGC
AATGGTGATCTGCTGCCAGCCAAAGTGGTGCCGGCGAAGGGGAAAGCCTA
TGCCGCCTATGCCCAGGCGGAGCACGAGCTCACCGACGTCCAGGTGCTGA
CGGGATCCGGATTCCGTTGGGTTCCGGCCTCGCACGGAAATGTGGCTCCC
GGAGCCCTGTCCTCCGGTCCGAATGTCGACGGGGAGCCCCTCTACGTCGG
CAGGGCCATCTACTGCGACAGCTTGAGTGTGGGGCAGATCCATCCCTCGC
ACGGCTGCATCTACATCCCATTCGGTGGCGAGGAGGTGCGTCTGGAGAAT
TACGAGGTTCTGGTGAGGATCTAGAAGCTTTCTAGACC

BS09136.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:21:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG32633-PA 858 CG32633-RA 1..858 17..874 4240 99.7 Plus
CG31086-PA 447 CG31086-RA 322..419 338..435 290 91.8 Plus
CG31086-PA 447 CG31086-RA 52..173 68..189 260 88.5 Plus
CG31086-PA 447 CG31086-RA 213..272 229..288 150 90 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:27:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG32633-RB 956 CG32633-RB 41..899 17..875 4265 99.8 Plus
CG32633-RA 1441 CG32633-RA 41..899 17..875 4265 99.8 Plus
CG31323-RA 3489 CG31323-RA 1922..2336 26..440 1070 84.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13561963..13562817 21..875 4245 99.8 Plus
3R 32079331 3R 26185782..26186154 68..440 1055 85.5 Plus
Blast to na_te.dros performed on 2015-02-11 10:27:31 has no hits.

BS09136.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:00:22 Download gff for BS09136.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32633-PA 1..858 17..874 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:07:11 Download gff for BS09136.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32633-PA 1..858 17..874 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 01:57:12 Download gff for BS09136.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32633-RA 36..899 10..875 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:20:43 Download gff for BS09136.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32633-RA 36..899 10..875 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:20:43 Download gff for BS09136.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13561963..13562817 21..875 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 01:57:12 Download gff for BS09136.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13455996..13456850 21..875 99   Plus

BS09136.complete Sequence

890 bp (890 high quality bases) assembled on 2006-02-16

GenBank Submission: FJ636358

> BS09136.complete
GAAGTTATCAGTCGACATGGCAGACCACAGATGGATGCACTTCAGCAACG
GCAGCGTGCCGCCGAATGCCGTGGTGGCTGGTCACGATTCGGACGGGGAC
ACCATCTACGTGGGCCGTGCCTTCTTCTCCAACGACATGCTGCCGGCGAA
GGTGATTCCCAACAAGGGCAAGGCCTACGTGGCGTATGCGCGCGAGGAGC
ACGAGCTGGAGAACTACGAGGTGCTTTCCGGCTACAACTACGAGTGGCTG
TCGGCGGAGAACGGGGAGGTGCCGCCGGGCGCCGTCAAAGTTGGTCGGAA
TGTGGACGGCGAGTATTTGTATGCGGGCAGGGGTTATCATGCCGGCAGCT
TAACCATGGGCAAGGTGCATCCATCCCACGGCTGCCTGTATATTCCCTAC
GATTCCGATGAGGTTAAGATCTTTGCCTACGAGGTGCTGTGCCAGCCGGA
ACGTTGGATCGACACCACCGCAACAAATATTCCGGATGGAGCTCTGGTTG
CTGGGCACGATTCCAACGGGGACACCATCTACGTGGGCAGGGTGTTCCGC
AATGGTGATCTGCTGCCAGCCAAAGTGGTGCCGGCGAAGGGGAAAGCCTA
TGCCGCCTATGCCCAGGCGGAGCACGAGCTCACCGACGTCCAGGTGCTGA
CGGGATCCGGATTCCGTTGGGTTCCGGCCTCGCACGGAAATGTGGCTCCC
GGAGCCCTGTCCTCCGGTCCGAATGTCGACGGGGAGCCCCTCTACGTCGG
CAGGGCCATCTACTGCGACAGCTTGAGTGTGGGCAAGATCCATCCCTCGC
ACGGCTGCATCTACATCCCATTCGGTGGCGAGGAGGTGCGTCTGGAGAAT
TACGAGGTTCTGGTGAGGATCTAGAAGCTTTCTAGACCAT

BS09136.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:04:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32633-RB 858 CG32633-PB 1..858 17..874 4290 100 Plus
CG32633-RA 858 CG32633-PA 1..858 17..874 4290 100 Plus
CG31086-RB 447 CG31086-PB 52..424 68..440 1055 85.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:04:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG32633-RB 956 CG32633-RB 41..899 17..875 4295 100 Plus
CG32633-RA 1441 CG32633-RA 41..899 17..875 4295 100 Plus
CG31323-RA 3489 CG31323-RA 1964..2336 68..440 1055 85.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:04:37
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13561963..13562817 21..875 4275 100 Plus
3R 32079331 3R 26185782..26186154 68..440 1055 85.5 Plus
2R 25286936 2R 12950953..12951023 840..770 190 84.5 Minus
Blast to na_te.dros performed on 2014-11-27 17:04:38 has no hits.

BS09136.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:42:01 Download gff for BS09136.complete
Subject Subject Range Query Range Percent Splice Strand
CG32633-RA 1..858 17..874 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:28:37 Download gff for BS09136.complete
Subject Subject Range Query Range Percent Splice Strand
CG32633-RA 33..896 10..875 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:00:54 Download gff for BS09136.complete
Subject Subject Range Query Range Percent Splice Strand
CG32633-RA 41..898 17..874 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:42:02 Download gff for BS09136.complete
Subject Subject Range Query Range Percent Splice Strand
CG32633-RA 33..896 10..875 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:34:05 Download gff for BS09136.complete
Subject Subject Range Query Range Percent Splice Strand
CG32633-RA 41..898 17..874 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:34:05 Download gff for BS09136.complete
Subject Subject Range Query Range Percent Splice Strand
X 13561957..13562816 17..874 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:00:54 Download gff for BS09136.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13455990..13456849 17..874 99   Plus

BS09136.pep Sequence

Translation from 16 to 873

> BS09136.pep
MADHRWMHFSNGSVPPNAVVAGHDSDGDTIYVGRAFFSNDMLPAKVIPNK
GKAYVAYAREEHELENYEVLSGYNYEWLSAENGEVPPGAVKVGRNVDGEY
LYAGRGYHAGSLTMGKVHPSHGCLYIPYDSDEVKIFAYEVLCQPERWIDT
TATNIPDGALVAGHDSNGDTIYVGRVFRNGDLLPAKVVPAKGKAYAAYAQ
AEHELTDVQVLTGSGFRWVPASHGNVAPGALSSGPNVDGEPLYVGRAIYC
DSLSVGKIHPSHGCIYIPFGGEEVRLENYEVLVRI*

BS09136.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:44:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG32633-PB 285 CG32633-PB 1..285 1..285 1541 100 Plus
CG32633-PA 285 CG32633-PA 1..285 1..285 1541 100 Plus
CG13321-PB 286 CG13321-PB 1..285 1..284 811 53.3 Plus
CG13321-PA 286 CG13321-PA 1..285 1..284 811 53.3 Plus
CG44250-PB 286 CG44250-PB 2..285 3..284 734 49.8 Plus