Clone Sequence Records
BS09158.3prime Sequence
882 bp (815 high quality bases) assembled on 2006-01-24
> BS09158.3prime
ATGGTCTAGAAAGCTTTTACTTTGTCTTGGATTTTTTGAGTCGGTTCCCG
CGCCTTCGTTTCTTTGCCGCCAGCTGTTTGTCCTCGTTCTCCCGCTGCTT
CCGCTTCATGTCGTTGACCTTCTGCTCCAGGCTGGCCTGGTATTCGTTGC
GTTTTCGCCGCTTCAGCTCGTTCTCGGGACTGGCTGGGAGCTGGCCTGGA
ATTGGATCGATGCCGTTCGCCTTGTGCTGCTCGTCGACTGGCACCGCTGG
CTTCTCGTTGTTGGCATTAACATCGTCGGCATGTGGCTGTGTTGTCGCGG
GCACGTGTCCATTAACTGGATCGGCATCGTGCTCGTTAATGGTCTCGTAC
TCCTCATCCTCATCGGTGTCGTCCTCGTCATCGTCATCCAGCAAGTAATC
CTCATCGCTGTCCGAATCGTTGAAAGCCCTTACGGGTAATGGCGGCAAGG
GACGACTGTCGGCCACCTCGGCATCGTGGATCATGTCGTGCTGATTAATG
AAGTTGTTCAGGGCGTCCTTGCTCAGCTCTTTGCCGATACTTTCAGCTCC
ATTAGCCTGGGCCGCGCGCATATTGAGCGAAAGTATACCGCCGGAATTGG
GGGCCAGTGGCAGATTAAGCGATTGGACGCGTGGGGGCAATGGCGGCGGC
AGCTCATCCAGTGTGTGAGTCTCTGTGTCGTTGCTAATGAGGGGTTCTTC
AGCGTCAAGAAAGGTGGGATCGTGCAGCTTTTTAATGCCCTCGATGATCG
CCTGGTAGGAGAAGTCCAGCTGGTCGGCGGTCTGTATGAGGCCCATGCGG
TAGCTGCGCAGCTCGCAGAGCACCTTGGACACATTGCACTCTCCGTACTT
GTCGATNAGTACCCAGGCACAGTCCACCAGGC
BS09158.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:21:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9181-PC | 1593 | Ptp61F-RC | 747..1593 | 863..17 | 4216 | 99.8 | Minus |
| CG9181-PB | 1608 | Ptp61F-RB | 762..1608 | 863..17 | 4216 | 99.8 | Minus |
| CG9181-PA | 1647 | Ptp61F-RA | 762..1572 | 863..53 | 4036 | 99.8 | Minus |
| CG9181-PD | 1296 | Ptp61F-RD | 411..1221 | 863..53 | 4036 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:45:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp61F-RB | 1835 | CG9181-RB | 866..1731 | 882..17 | 4274 | 99.7 | Minus |
| Ptp61F-RC | 1796 | CG9181-RC | 827..1692 | 882..17 | 4274 | 99.7 | Minus |
| Ptp61F-RE | 5167 | CG9181-RE | 2654..3483 | 882..53 | 4094 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 13:45:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1344626..1345161 | 180..715 | 2680 | 100 | Plus |
| 3L | 28110227 | 3L | 1345498..1345664 | 716..882 | 764 | 97 | Plus |
| 3L | 28110227 | 3L | 1344403..1344532 | 53..182 | 650 | 100 | Plus |
| 3L | 28110227 | 3L | 1342597..1342635 | 17..55 | 195 | 100 | Plus |
Blast to na_te.dros performed 2015-02-08 13:45:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 580..617 | 388..351 | 109 | 76.3 | Minus |
BS09158.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:01:03 Download gff for
BS09158.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9181-PB | 743..1608 | 17..882 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:08:05 Download gff for
BS09158.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9181-PB | 743..1608 | 17..882 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:49:13 Download gff for
BS09158.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp61F-RC | 827..1696 | 13..882 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 15:30:40 Download gff for
BS09158.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp61F-RC | 827..1696 | 13..882 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 15:30:40 Download gff for
BS09158.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1342593..1342633 | 13..53 | 95 | <- | Plus |
| 3L | 1344404..1344529 | 54..179 | 100 | <- | Plus |
| 3L | 1344626..1345161 | 180..715 | 100 | <- | Plus |
| 3L | 1345498..1345664 | 716..882 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:49:13 Download gff for
BS09158.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1342593..1342633 | 13..53 | 95 | <- | Plus |
| arm_3L | 1344404..1344529 | 54..179 | 100 | <- | Plus |
| arm_3L | 1344626..1345161 | 180..715 | 100 | <- | Plus |
| arm_3L | 1345498..1345664 | 716..882 | 98 | | Plus |
BS09158.5prime Sequence
942 bp (796 high quality bases) assembled on 2006-01-24
> BS09158.5prime
GAAGTTATCAGTCGACATGACGAAATTCGCGCAGCGCAGCAAAAAGACGT
GCGAAATACGCGGGACAATGGATGTGTGTGTGTGTGTGTGTGTGTCTATG
TGGAAGGAAATTTGTGAGACCTGCGACCGGGAGGCGAAGGAGAAGCAGTT
CAGCACCTCGGAATCGGAACGCCACACGAACCGCGGCCTGAATCGCTATC
GGGATGTGAATCCGTACGATCATTCCCGCATTGTTTTGAAGCGCGGCAGC
GTAGACTACATCAATGCGAACCTGGTTCAGCTGGAGCGCGCCGAGCGCCA
GTACATCCTGACCCAAGGACCGCTGGTGGACACAGTGGGCCACTTCTGGC
TGATGGTATGGGAGCAGAAGTCCAGAGCAGTTCTCATGCTCAACAAGCTG
ATGGAGAAGAAACAGATCAAGTGCCACCTCTACTGGCCCAACGAGATGGG
AGCCGACAAGGCCCTGAAACTGCCCCACGTCAAACTCACCGTGGAGCTCG
TCCGTCTCGAGACCTACCAGAACTTTGTGCGGCGATGGTTCAAATTAACC
GATCTCGAAACGCAGCAGAGTCGTGAAGTGATGCAGTTCCACTACACCAC
ATGGCCGGACTTTGGCATTCCCAGCTCGCCGAACGCATTCCTTAAGTTCT
TGCAGCAGGTTCGCGACTCCGGCTGCCTCAGCCGCGACGTGGGTCCAGCC
GTAGTGCACTGCAGTGCCGGAATCGGGCGGTCGGGCACCTTCTGCCTGGT
GGACTGTTGCCTGGTACTTATCGACAAGTACGGAGAGTGCAATGTGTCCA
ANGTGCTCTGCGAGCTGCGCAGCTACCGCATGGGCCTCATACAGACCGCC
GACCAGCTGGACTTCTCCTACCANGCGATCATCGAGGGCATTAAAAAGCT
GCACGATCCCACCTTTTCTGACGCTGAAGAACCCCTCATTAG
BS09158.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:21:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9181-PC | 1593 | Ptp61F-RC | 1..926 | 17..942 | 4542 | 99.5 | Plus |
| CG9181-PB | 1608 | Ptp61F-RB | 103..941 | 104..942 | 4107 | 99.5 | Plus |
| CG9181-PA | 1647 | Ptp61F-RA | 103..941 | 104..942 | 4107 | 99.5 | Plus |
| CG9181-PD | 1296 | Ptp61F-RD | 1..590 | 353..942 | 2862 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 11:56:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp61F-RC | 1796 | CG9181-RC | 100..1025 | 17..942 | 4578 | 99.6 | Plus |
| Ptp61F-RA | 2115 | CG9181-RA | 226..1064 | 104..942 | 4143 | 99.5 | Plus |
| Ptp61F-RB | 1835 | CG9181-RB | 226..1064 | 104..942 | 4143 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 11:56:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1345498..1345864 | 910..544 | 1813 | 99.5 | Minus |
| 3L | 28110227 | 3L | 1345943..1346207 | 543..279 | 1325 | 100 | Minus |
| 3L | 28110227 | 3L | 1346273..1346452 | 284..105 | 885 | 99.4 | Minus |
| 3L | 28110227 | 3L | 1424790..1424880 | 107..17 | 455 | 100 | Minus |
| 3L | 28110227 | 3L | 8238744..8238792 | 17..65 | 245 | 100 | Plus |
| 3L | 28110227 | 3L | 24138003..24138051 | 17..65 | 245 | 100 | Plus |
| 3R | 32079331 | 3R | 2151288..2151336 | 65..17 | 245 | 100 | Minus |
| 3R | 32079331 | 3R | 9283968..9284016 | 17..65 | 245 | 100 | Plus |
| 3R | 32079331 | 3R | 19744302..19744350 | 65..17 | 245 | 100 | Minus |
| 2R | 25286936 | 2R | 2914197..2914245 | 17..65 | 245 | 100 | Plus |
| 3R | 32079331 | 3R | 2845096..2845144 | 17..65 | 230 | 98 | Plus |
| 3R | 32079331 | 3R | 2749024..2749072 | 65..17 | 200 | 93.9 | Minus |
| 3L | 28110227 | 3L | 23311514..23311562 | 17..65 | 185 | 91.8 | Plus |
| 3R | 32079331 | 3R | 2726280..2726328 | 65..17 | 185 | 91.8 | Minus |
| 3R | 32079331 | 3R | 2843462..2843510 | 17..65 | 185 | 91.8 | Plus |
Blast to na_te.dros performed 2015-02-02 11:56:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rt1a | 5108 | Rt1a DME278684 5108bp Derived from AJ278684 (AJ278684.1) (Rel. 64, Last updated, Version 1). | 1..61 | 75..15 | 296 | 98.4 | Minus |
BS09158.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:01:04 Download gff for
BS09158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9181-PC | 1..926 | 17..942 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:08:07 Download gff for
BS09158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9181-PC | 1..926 | 17..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 06:21:16 Download gff for
BS09158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp61F-RC | 94..1025 | 12..942 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:34:45 Download gff for
BS09158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp61F-RC | 94..1025 | 12..942 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 12:34:45 Download gff for
BS09158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1345130..1345161 | 911..942 | 93 | <- | Minus |
| 3L | 1345498..1345864 | 544..910 | 99 | <- | Minus |
| 3L | 1345943..1346205 | 281..543 | 100 | <- | Minus |
| 3L | 1346277..1346450 | 107..280 | 100 | <- | Minus |
| 3L | 1424791..1424886 | 12..106 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 06:21:16 Download gff for
BS09158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1345130..1345161 | 911..942 | 93 | <- | Minus |
| arm_3L | 1345498..1345864 | 544..910 | 99 | <- | Minus |
| arm_3L | 1345943..1346205 | 281..543 | 100 | <- | Minus |
| arm_3L | 1346277..1346450 | 107..280 | 100 | <- | Minus |
| arm_3L | 1424791..1424886 | 12..106 | 97 | | Minus |
BS09158.complete Sequence
1625 bp (1625 high quality bases) assembled on 2006-02-16
GenBank Submission: FJ636363
> BS09158.complete
GAAGTTATCAGTCGACATGACGAAATTCGCGCAGCGCAGCAAAAAGACGT
GCGAAATACGCGGGACAATGGATGTGTGTGTGTGTGTGTGTGTGTCTATG
TGGAAGGAAATTTGTGAGACCTGCGACCGGGAGGCGAAGGAGAAGCAGTT
CAGCACCTCGGAATCGGAACGCCACACGAACCGCGGCCTGAATCGCTATC
GGGATGTGAATCCGTACGATCATTCCCGCATTGTTTTGAAGCGCGGCAGC
GTAGACTACATCAATGCGAACCTGGTTCAGCTGGAGCGCGCCGAGCGCCA
GTACATCCTGACCCAAGGACCGCTGGTGGACACAGTGGGCCACTTCTGGC
TGATGGTATGGGAGCAGAAGTCCAGAGCAGTTCTCATGCTCAACAAGCTG
ATGGAGAAGAAACAGATCAAGTGCCACCTCTACTGGCCCAACGAGATGGG
AGCCGACAAGGCCCTGAAACTGCCCCACGTCAAACTCACCGTGGAGCTCG
TCCGTCTCGAGACCTACCAGAACTTTGTGCGGCGATGGTTCAAATTAACC
GATCTCGAAACGCAGCAGAGTCGTGAAGTGATGCAGTTCCACTACACCAC
ATGGCCGGACTTTGGCATTCCCAGCTCGCCGAACGCATTCCTTAAGTTCT
TGCAGCAGGTTCGCGACTCCGGCTGCCTCAGCCGCGACGTGGGTCCAGCC
GTAGTGCACTGCAGTGCCGGAATCGGGCGGTCGGGCACCTTCTGCCTGGT
GGACTGTTGCCTGGTACTTATCGACAAGTACGGAGAGTGCAATGTGTCCA
AGGTGCTCTGCGAGCTGCGCAGCTACCGCATGGGCCTCATACAGACCGCC
GACCAGCTGGACTTCTCCTACCAGGCGATCATCGAGGGCATTAAAAAGCT
GCACGATCCCACCTTTCTTGACGCTGAAGAACCCCTCATTAGCAACGACA
CAGAGACTCACACACTGGATGAGCTGCCGCCGCCATTGCCCCCACGCGTC
CAATCGCTTAATCTGCCACTGGCCCCCAATTCCGGCGGTATACTTTCGCT
CAATATGCGCGCGGCCCAGGCTAATGGAGCTGAAAGTATCGGCAAAGAGC
TGAGCAAGGACGCCCTGAACAACTTCATTAATCAGCACGACATGATCCAC
GATGCCGAGGTGGCCGACAGTCGTCCCTTGCCGCCATTACCCGTAAGGGC
TTTCAACGATTCGGACAGCGATGAGGATTACTTGCTGGATGACGATGACG
AGGACGACACCGATGAGGATGAGGAGTACGAGACCATTAACGAGCACGAT
GCCGATCCAGTTAATGGACACGTGCCCGCGACAACACAGCCACATGCCGA
CGATGTTAATGCCAACAACGAGAAGCCAGCGGTGCCAGTCGACGAGCAGC
ACAAGGCGAACGGCATCGATCCAATTCCAGGCCAGCTCCCAGCCAGTCCC
GAGAACGAGCTGAAGCGGCGAAAACGCAACGAATACCAGGCCAGCCTGGA
GCAGAAGGTCAACGACATGAAGCGGAAGCAGCGGGAGAACGAGGACAAAC
AGCTGGCGGCAAAGAAACGAAGGCGCGGGAACCGACTCAAAAAATCCAAG
ACAAAGTAAAAGCTTTCTAGACCAT
BS09158.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:57:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp61F-RC | 1593 | CG9181-PC | 1..1593 | 17..1609 | 7965 | 100 | Plus |
| Ptp61F-RB | 1608 | CG9181-PB | 103..1608 | 104..1609 | 7530 | 100 | Plus |
| Ptp61F-RA | 1647 | CG9181-PA | 103..1572 | 104..1573 | 7350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:57:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp61F-RC | 1796 | CG9181-RC | 100..1692 | 17..1609 | 7965 | 100 | Plus |
| Ptp61F-RB | 1835 | CG9181-RB | 226..1731 | 104..1609 | 7530 | 100 | Plus |
| Ptp61F-RA | 2115 | CG9181-RA | 226..1695 | 104..1573 | 7350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:57:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1344626..1345161 | 1446..911 | 2680 | 100 | Minus |
| 3L | 28110227 | 3L | 1345498..1345864 | 910..544 | 1835 | 100 | Minus |
| 3L | 28110227 | 3L | 1345943..1346207 | 543..279 | 1325 | 100 | Minus |
| 3L | 28110227 | 3L | 1346273..1346452 | 284..105 | 885 | 99.4 | Minus |
| 3L | 28110227 | 3L | 1344403..1344532 | 1573..1444 | 650 | 100 | Minus |
| 3L | 28110227 | 3L | 1424790..1424880 | 107..17 | 455 | 100 | Minus |
| 3L | 28110227 | 3L | 8238744..8238792 | 17..65 | 245 | 100 | Plus |
| 3L | 28110227 | 3L | 24138003..24138051 | 17..65 | 245 | 100 | Plus |
| 3R | 32079331 | 3R | 2151288..2151336 | 65..17 | 245 | 100 | Minus |
| 3R | 32079331 | 3R | 9283968..9284016 | 17..65 | 245 | 100 | Plus |
| 3R | 32079331 | 3R | 19744302..19744350 | 65..17 | 245 | 100 | Minus |
| 2R | 25286936 | 2R | 2914197..2914245 | 17..65 | 245 | 100 | Plus |
| 2R | 25286936 | 2R | 6450920..6450968 | 65..17 | 245 | 100 | Minus |
| 3R | 32079331 | 3R | 2845096..2845144 | 17..65 | 230 | 98 | Plus |
| 2R | 25286936 | 2R | 3616880..3616928 | 65..17 | 230 | 98 | Minus |
| U | 3151297 | U | 1765308..1765356 | 17..65 | 230 | 98 | Plus |
| U | 3151297 | U | 2185139..2185187 | 65..17 | 230 | 98 | Minus |
| 2R | 25286936 | 2R | 2147678..2147726 | 65..17 | 215 | 95.9 | Minus |
| 3R | 32079331 | 3R | 2749024..2749072 | 65..17 | 200 | 93.9 | Minus |
| 3L | 28110227 | 3L | 1342597..1342635 | 1609..1571 | 195 | 100 | Minus |
| 3L | 28110227 | 3L | 23311514..23311562 | 17..65 | 185 | 91.8 | Plus |
| 3R | 32079331 | 3R | 2726280..2726328 | 65..17 | 185 | 91.8 | Minus |
| 3R | 32079331 | 3R | 2843462..2843510 | 17..65 | 185 | 91.8 | Plus |
Blast to na_te.dros performed 2014-11-28 07:57:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rt1a | 5108 | Rt1a DME278684 5108bp Derived from AJ278684 (AJ278684.1) (Rel. 64, Last updated, Version 1). | 1..61 | 75..15 | 296 | 98.4 | Minus |
BS09158.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:42:07 Download gff for
BS09158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp61F-RC | 1..1593 | 17..1609 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:47:09 Download gff for
BS09158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp61F-RC | 100..1690 | 17..1607 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:05 Download gff for
BS09158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp61F-RC | 100..1690 | 17..1607 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:42:07 Download gff for
BS09158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp61F-RC | 94..1696 | 12..1613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:07:48 Download gff for
BS09158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ptp61F-RC | 100..1690 | 17..1607 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:07:48 Download gff for
BS09158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1342599..1342633 | 1573..1607 | 100 | <- | Minus |
| 3L | 1344404..1344529 | 1447..1572 | 100 | <- | Minus |
| 3L | 1344626..1345161 | 911..1446 | 100 | <- | Minus |
| 3L | 1345498..1345864 | 544..910 | 100 | <- | Minus |
| 3L | 1345943..1346205 | 281..543 | 100 | <- | Minus |
| 3L | 1346277..1346450 | 107..280 | 100 | <- | Minus |
| 3L | 1424791..1424880 | 17..106 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:05 Download gff for
BS09158.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1342599..1342633 | 1573..1607 | 100 | <- | Minus |
| arm_3L | 1344404..1344529 | 1447..1572 | 100 | <- | Minus |
| arm_3L | 1344626..1345161 | 911..1446 | 100 | <- | Minus |
| arm_3L | 1345498..1345864 | 544..910 | 100 | <- | Minus |
| arm_3L | 1345943..1346205 | 281..543 | 100 | <- | Minus |
| arm_3L | 1346277..1346450 | 107..280 | 100 | <- | Minus |
| arm_3L | 1424791..1424880 | 17..106 | 100 | | Minus |
BS09158.pep Sequence
Translation from 16 to 1608
> BS09158.pep
MTKFAQRSKKTCEIRGTMDVCVCVCVSMWKEICETCDREAKEKQFSTSES
ERHTNRGLNRYRDVNPYDHSRIVLKRGSVDYINANLVQLERAERQYILTQ
GPLVDTVGHFWLMVWEQKSRAVLMLNKLMEKKQIKCHLYWPNEMGADKAL
KLPHVKLTVELVRLETYQNFVRRWFKLTDLETQQSREVMQFHYTTWPDFG
IPSSPNAFLKFLQQVRDSGCLSRDVGPAVVHCSAGIGRSGTFCLVDCCLV
LIDKYGECNVSKVLCELRSYRMGLIQTADQLDFSYQAIIEGIKKLHDPTF
LDAEEPLISNDTETHTLDELPPPLPPRVQSLNLPLAPNSGGILSLNMRAA
QANGAESIGKELSKDALNNFINQHDMIHDAEVADSRPLPPLPVRAFNDSD
SDEDYLLDDDDEDDTDEDEEYETINEHDADPVNGHVPATTQPHADDVNAN
NEKPAVPVDEQHKANGIDPIPGQLPASPENELKRRKRNEYQASLEQKVND
MKRKQRENEDKQLAAKKRRRGNRLKKSKTK*
BS09158.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:39:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ptp61F-PC | 530 | CG9181-PC | 1..530 | 1..530 | 2816 | 100 | Plus |
| Ptp61F-PB | 535 | CG9181-PB | 34..535 | 29..530 | 2656 | 99.8 | Plus |
| Ptp61F-PA | 548 | CG9181-PA | 34..524 | 29..519 | 2601 | 99.8 | Plus |
| Ptp61F-PE | 431 | CG9181-PE | 1..407 | 113..519 | 2158 | 100 | Plus |
| Ptp61F-PD | 431 | CG9181-PD | 1..407 | 113..519 | 2158 | 100 | Plus |
