Clone Sequence Records
BS09165.3prime Sequence
969 bp (860 high quality bases) assembled on 2006-01-24
> BS09165.3prime
ATGGTCTAGAAAGCTTTTAGAACTGACCACTCAGCTCGTCGTCAAAATCG
GAGGTGGGTGGCGTGTCCTTGACATCCGCCCGCACCGTGTACTCCTTCTC
GTTGACACTGTAGTAGATGTTGAAGTACCTGCCCGACTGAATTCTCATGG
CAAGGTAGCCACTCTGGCCGCGATCCTTGGCCGTCCGCTGGTAGATCACA
TGTCCGCTGCTCAGGATTACGCGCACCTCCTGCGAACCGTCCTCGTTCTT
CCGCGCATTCTGCCGCATGATCTGCACCAGCTGCGTCCTCAGTGGATTGG
AACTGGGCTTCAGGCCCGGCAGCTGAACGAGCGGCTCACAGCGGCAGTTG
AGCTTCTGGGTGAGTGGGCATGTGGTCTGGGGATTGGGTGACGAGCCGAG
CAGTTGGCCCGGCACCGCGGCCACCGGCGCCACTGCACCCAGTCCCAGGT
TGCCCAGATTCAGGCCGCCCAGAGTGCCGAAGCCGCCGTTTAGCGAACCG
AGTCCCAGGCCGTTGATCAAATTGGGCAGGCCACCCACCCAGGTTCCGAT
AAGTGGAAGATTCTGGCTAAACTGAGGCAGCCAGCCGGACTGCGGCTGCT
GGCTCTGGGCATTCGAACTGGAGGCCACAGGAGTCACCACCGTAATCGGC
TGCAATGGCTGCAGAGGCTGAAGTTGCTGCAGTGGCGGCAGTGGCTGCAG
CGGGGGATTCACATTAAGGCCATCGAAGAAAACGGGATAGTTGCCGCTGG
AACCAGCCAGGCTGCTCTGGCCACCATTGGCGGTCAATTGGCGTTTGTCA
CGGCGTTCCAAGGACTCCATGGGATCGTCCTTTTCCATGGATTTTTCAGT
GGAAGTGGGCATGGGTGTCCTTGTACTTGCTGTCGTTGTTGTGGCTAAAG
CCAGTCCAATAGCAATGGCAGCCATAAAGATGGTAAAACTTANAATGTTG
GCCATGTCGACTGATAACT
BS09165.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:21:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32631-PA | 939 | CG32631-RA | 1..939 | 955..17 | 4676 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 14:28:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32631-RA | 1289 | CG32631-RA | 76..1018 | 957..15 | 4704 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 14:28:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13556825..13557595 | 785..15 | 3855 | 100 | Minus |
| X | 23542271 | X | 13556547..13556719 | 957..785 | 854 | 99.4 | Minus |
Blast to na_te.dros performed on 2015-01-31 14:28:47 has no hits.
BS09165.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:01:18 Download gff for
BS09165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-PA | 1..939 | 17..955 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:08:27 Download gff for
BS09165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-PA | 1..939 | 17..955 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:06:42 Download gff for
BS09165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-RA | 69..1021 | 11..963 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:29:36 Download gff for
BS09165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-RA | 69..1021 | 11..963 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:29:36 Download gff for
BS09165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13556540..13556719 | 785..963 | 97 | -> | Minus |
| X | 13556826..13557598 | 11..784 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:06:42 Download gff for
BS09165.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13450573..13450752 | 785..963 | 97 | -> | Minus |
| arm_X | 13450859..13451631 | 11..784 | 99 | | Minus |
BS09165.5prime Sequence
847 bp (846 high quality bases) assembled on 2006-01-24
> BS09165.5prime
GAAGTTATCAGTCGACATGGCCAACATTCTAAGTTTTACCATCTTTATGG
CTGCCATTGCTATTGGACTGGCTTTAGCCACAACAACGACAGCAAGTACA
AGGACACCCATGCCCACTTCCACTGAAAAATCCATGGAAAAGGACGATCC
CATGGAGTCCTTGGAACGCCGTGACAAACGCCAATTGACCGCCAATGGTG
GCCAGAGCAGCCTGGCTGGTTCCAGCGGCAACTATCCCGTTTTCTTCGAT
GGCCTTAATGTGAATCCCCCGCTGCAGCCACTGCCGCCACTGCAGCAACT
TCAGCCTCTGCAGCCATTGCAGCCGATTACGGTGGTGACTCCTGTGGCCT
CCAGTTCGAATGCCCAGAGCCAGCAGCCGCAGTCCGGCTGGCTGCCTCAG
TTTAGCCAGAATCTTCCACTTATCGGAACCTGGGTGGGTGGCCTGCCCAA
TTTGATCAACGGCCTGGGACTCGGTTCGCTAAACGGCGGCTTCGGCACTC
TGGGCGGCCTGAATCTGGGCAACCTGGGACTGGGTGCAGTGGCGCCGGTG
GCCGCGGTGCCGGGCCAACTGCTCGGCTCGTCACCCAATCCCCAGACCAC
ATGCCCACTCACCCAGAAGCTCAACTGCCGCTGTGAGCCGCTCGTTCAGC
TGCCGGGCCTGAAGCCCAGTTCCAATCCACTGAGGACGCAGCTGGTGCAG
ATCATGCGGCAGAATGCGCGGAAGAACGAGGACGGTTCGCAGGAGGTGCG
CGTAATCCTGAGCAGCGGACATGTGATCTACCAGCGGACGGCCAAGGATC
GCGGCCAGAGTGGCTACCTTGCCATGAGAATTCAGTCGGGCAGGTAC
BS09165.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:21:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32631-PA | 939 | CG32631-RA | 1..831 | 17..847 | 4155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:22:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32631-RA | 1289 | CG32631-RA | 76..908 | 15..847 | 4165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:22:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13556825..13557485 | 187..847 | 3305 | 100 | Plus |
| X | 23542271 | X | 13556547..13556719 | 15..187 | 865 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:22:23 has no hits.
BS09165.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:01:19 Download gff for
BS09165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-PA | 1..831 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:08:28 Download gff for
BS09165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-PA | 1..831 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:13:14 Download gff for
BS09165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-RA | 69..908 | 9..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:07:25 Download gff for
BS09165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-RA | 69..908 | 9..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:07:25 Download gff for
BS09165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13556540..13556719 | 9..187 | 97 | -> | Plus |
| X | 13556826..13557485 | 188..847 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:13:14 Download gff for
BS09165.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13450573..13450752 | 9..187 | 97 | -> | Plus |
| arm_X | 13450859..13451518 | 188..847 | 100 | | Plus |
BS09165.complete Sequence
971 bp (971 high quality bases) assembled on 2006-02-16
GenBank Submission: FJ636365
> BS09165.complete
GAAGTTATCAGTCGACATGGCCAACATTCTAAGTTTTACCATCTTTATGG
CTGCCATTGCTATTGGACTGGCTTTAGCCACAACAACGACAGCAAGTACA
AGGACACCCATGCCCACTTCCACTGAAAAATCCATGGAAAAGGACGATCC
CATGGAGTCCTTGGAACGCCGTGACAAACGCCAATTGACCGCCAATGGTG
GCCAGAGCAGCCTGGCTGGTTCCAGCGGCAACTATCCCGTTTTCTTCGAT
GGCCTTAATGTGAATCCCCCGCTGCAGCCACTGCCGCCACTGCAGCAACT
TCAGCCTCTGCAGCCATTGCAGCCGATTACGGTGGTGACTCCTGTGGCCT
CCAGTTCGAATGCCCAGAGCCAGCAGCCGCAGTCCGGCTGGCTGCCTCAG
TTTAGCCAGAATCTTCCACTTATCGGAACCTGGGTGGGTGGCCTGCCCAA
TTTGATCAACGGCCTGGGACTCGGTTCGCTAAACGGCGGCTTCGGCACTC
TGGGCGGCCTGAATCTGGGCAACCTGGGACTGGGTGCAGTGGCGCCGGTG
GCCGCGGTGCCGGGCCAACTGCTCGGCTCGTCACCCAATCCCCAGACCAC
ATGCCCACTCACCCAGAAGCTCAACTGCCGCTGTGAGCCGCTCGTTCAGC
TGCCGGGCCTGAAGCCCAGTTCCAATCCACTGAGGACGCAGCTGGTGCAG
ATCATGCGGCAGAATGCGCGGAAGAACGAGGACGGTTCGCAGGAGGTGCG
CGTAATCCTGAGCAGCGGACATGTGATCTACCAGCGGACGGCCAAGGATC
GCGGCCAGAGTGGCTACCTTGCCATGAGAATTCAGTCGGGCAGGTACTTC
AACATCTACTACAGTGTCAACGAGAAGGAGTACACGGTGCGGGCGGATGT
CAAGGACACGCCACCCACCTCCGATTTTGACGACGAGCTGAGTGGTCAGT
TCTAAAAGCTTTCTAGACCAT
BS09165.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32631-RA | 939 | CG32631-PA | 1..939 | 17..955 | 4695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32631-RA | 1289 | CG32631-RA | 76..1018 | 15..957 | 4715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13556825..13557595 | 187..957 | 3855 | 100 | Plus |
| X | 23542271 | X | 13556547..13556719 | 15..187 | 865 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:13:46 has no hits.
BS09165.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:41:54 Download gff for
BS09165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-RA | 1..939 | 17..955 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:28:26 Download gff for
BS09165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-RA | 69..1021 | 9..961 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:55:31 Download gff for
BS09165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-RA | 78..1014 | 17..953 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:41:54 Download gff for
BS09165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-RA | 69..1021 | 9..961 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:14:07 Download gff for
BS09165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-RA | 78..1014 | 17..953 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:14:07 Download gff for
BS09165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13556549..13556719 | 17..187 | 100 | -> | Plus |
| X | 13556826..13557591 | 188..953 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:55:31 Download gff for
BS09165.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13450582..13450752 | 17..187 | 100 | -> | Plus |
| arm_X | 13450859..13451624 | 188..953 | 100 | | Plus |
BS09165.pep Sequence
Translation from 16 to 954
> BS09165.pep
MANILSFTIFMAAIAIGLALATTTTASTRTPMPTSTEKSMEKDDPMESLE
RRDKRQLTANGGQSSLAGSSGNYPVFFDGLNVNPPLQPLPPLQQLQPLQP
LQPITVVTPVASSSNAQSQQPQSGWLPQFSQNLPLIGTWVGGLPNLINGL
GLGSLNGGFGTLGGLNLGNLGLGAVAPVAAVPGQLLGSSPNPQTTCPLTQ
KLNCRCEPLVQLPGLKPSSNPLRTQLVQIMRQNARKNEDGSQEVRVILSS
GHVIYQRTAKDRGQSGYLAMRIQSGRYFNIYYSVNEKEYTVRADVKDTPP
TSDFDDELSGQF*
BS09165.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:41:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32631-PA | 312 | CG32631-PA | 1..312 | 1..312 | 1612 | 100 | Plus |
