Clone Sequence Records
BS09184.complete Sequence
1646 bp assembled on 2010-04-26
GenBank Submission: KX804566
> BS09184.complete
GAAGTTATCAGTCGACATGAAGCACAAACTTCTGTTGTTGTTCCTTGCAG
GAGCGGCTTTGCTCCTGGCCACTGAAGTTCGGAGCCAACATGAGGACATT
CCGTACCAGCCGGTGAGCAACATCTGCCAGACGTGCCTGTGCCTCAGCAC
CCAGGATGTGGATCATCGGACGCACTTCAACCTGGACTGCTCGGTGAGGA
ATTTCGAGCACATCCTGGCCCGCTGGCCGGAGCAGTTTGGCAGCCAGGCG
ATTGCGTCCGGAGCTGCATCGGAGATTGTCGTCTCGTACTCGGGCAATAG
GATCAAGTTGCTCCAACAGCTGCCGGCCACAAATGCCAGCTTAACTCTCT
CCTGCCGCCACTGTGGCCTACAGGATCTGCAGGCTCCGCTGTTCATGGAC
GTGCCCAATGTGCAGGCCCTTTATATCAGCTGGAATGATATAACTGACGA
TGCCTTGGTGCCGGATCTCTTCAGGGGTCCTTTCCGCAACACTCGCTACG
AGCCGATTGGTTTGCGAGACCTGGACCTGAGCCACAACCGGATAGTTCGA
CTGGATCGCCGGCTCTTCGAGCACACTCCCCACTTGACCAAGTTGAACTT
GGCCTACAACAAGCTGAGTTCCCTGGATGAAGCCACCACAGCCTCCATTG
GATCGGTTGCTACACTGCAGCGACTGGATCTCTCGCACAATGGCCTGATG
ACTTTGCCAGCGCAGCTTTTCTCGAAGCTCACAAGCCTCCGTTTCCTGGA
CGTCTCCGGAAATGAGTTTTCCACGATGCCAGCCAGCCTGCAGCTATTGG
GCAAATCTTTGGTTCAACTCAACTTGGCGGGAAATGCATTTCTCAGCTTG
AAGGAGAATAGCCTGCAGGGCTTGGTTTCCCTGAAACGACTGAATATAAG
TAGCATGCCCTCCCTGCGAAGTCTGGAGAAGGGTGCTCTGAACTTGCCTG
CCTTGGAGCACCTAGATTGCTCTAGGAACTCGAAGCTGGAGCGCTTGGAG
TTGGCCGATCTTCTGAGCAGTCGAAATTTGTCGCAGTTGGACTTGTCCTG
GAATGCACTGACTACTCTGGTTATCAATGCCACCGGTTCGAGCAATAACA
GTAGTAATTCTACGAATGAGACCTGGCCACGACTCCGTCGCATGAGCATC
TCCGGAAATCCCTGGTATTGCAGCTGCGAACTGTTCAAAGCCCTGGAGCT
GATTGGACTGAACCACATCGATCGGGAATGGGATGGAACTGAGGCGCGTT
GTGAAACGCCATACCTTCTGGCCGGATCTCCGCTCTCCAATTTGACAGCC
GAACGTATTTGCAAAATGGTGATACCCAAGAAATATCGCGAGGTGGACGA
GGAGCCACCGCGATTCCTGCGACGCCACTACATAATACTCACCGCCATTA
TAGCCAGCATTGTCCTGGTAATTGGTCTGGTCATCGGATTCGTCGTGGTC
TGTGTGCGCCGACGGCTCAAGGGCAGCGATTACGGAGTACAACCCATCCG
GTACACCAGCGTTAGGGGCAGCAATCTGTCGCAGTTCTCGCAGCTGCAGC
CCGTCTCGGTGGCCAGCAAGTTCAATAATGTTCATGCCGGGAGCAGCAGT
GGGGTGACCACTGGTGCTGCCAATGCCTAAAAGCTATCTAGACCAT
BS09184.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:12:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7702-RB | 1614 | CG7702-PB | 1..1614 | 17..1630 | 8070 | 100 | Plus |
| CG7702-RA | 1614 | CG7702-PA | 1..1614 | 17..1630 | 8070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7702-RB | 2268 | CG7702-RB | 387..2000 | 17..1630 | 8070 | 100 | Plus |
| CG7702-RA | 2404 | CG7702-RA | 523..2136 | 17..1630 | 8070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18672821..18674411 | 40..1630 | 7955 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:12:37 has no hits.
BS09184.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-26 16:57:09 Download gff for
BS09184.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7702-RB | 554..2165 | 17..1628 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:48:05 Download gff for
BS09184.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7702-RA | 521..2132 | 17..1628 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:20:52 Download gff for
BS09184.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7702-RA | 523..2134 | 17..1628 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:20:52 Download gff for
BS09184.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18671351..18671374 | 17..40 | 100 | -> | Plus |
| 3R | 18672822..18674409 | 41..1628 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:48:05 Download gff for
BS09184.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14497073..14497096 | 17..40 | 100 | -> | Plus |
| arm_3R | 14498544..14500131 | 41..1628 | 100 | | Plus |
BS09184.3prime Sequence
820 bp (793 high quality bases) assembled on 2006-01-24
> BS09184.3prime
ATGGTCTAGATAGCTTTTAGGCATTGGCAGCACCAGTGGTCACCCCACTG
CTGCTCCCGGCATGAACATTATTGAACTTGCTGGCCACCGAGACGGGCTG
CAGCTGCGAGAACTGCGACAGATTGCTGCCCCTAACGCTGGTGTACCGGA
TGGGTTGTACTCCGTAATCGCTGCCCTTGAGCCGTCGGCGCACACAGACC
ACGACGAATCCGATGACCAGACCAATTACCAGGACAATGCTGGCTATAAT
GGCGGTGAGTATTATGTAGTGGCGTCGCAGGAATCGCGGTGGCTCCTCGT
CCACCTCGCGATATTTCTTGGGTATCACCATTTTGCAAATACGTTCGGCT
GTCAAATTGGAGAGCGGAGATCCGGCCAGAAGGTATGGCGTTTCACAACG
CGCCTCAGTTCCATCCCATTCCCGATCGATGTGGTTCAGTCCAATCAGCT
CCAGGGCTTTGAACAGTTCGCAGCTGCAATACCAGGGATTTCCGGAGATG
CTCATGCGACGGAGTCGTGGCCAGGTCTCATTCGTAGAATTACTACTGTT
ATTGCTCGAACCGGTGGCATTGATAACCAGAGTAGTCAGTGCATTCCAGG
ACAAGTCCAACTGCGACAAATTTCGACTGCTCAGAAGATCGGCCAACTCC
AAGCGCTCCAGCTTCGAGTTCCTAGAGCAATCTAGGTGCTCCAAGGCAGG
CAAGTTCAGAGCACCCTTCTCCAGACTTCGCAGGGAGGGCATGCTACTTA
TATTCAGTCGTTTCAGGGAAACCAAGCCCTGCAGGCTATTCTCCTTNCAG
CTGAGAAATGCATTTCCCGC
BS09184.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:22:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7702-PA | 1614 | CG7702-RA | 811..1614 | 820..17 | 3976 | 99.7 | Minus |
| CG7702-PB | 1614 | CG7702-RB | 811..1614 | 820..17 | 3976 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:41:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7702-RB | 2268 | CG7702-RB | 1197..2000 | 820..17 | 3994 | 99.8 | Minus |
| CG7702-RA | 2404 | CG7702-RA | 1333..2136 | 820..17 | 3994 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:41:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18673608..18674411 | 820..17 | 3994 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:41:19 has no hits.
BS09184.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:01:57 Download gff for
BS09184.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7702-PB | 811..1614 | 17..820 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:09:20 Download gff for
BS09184.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7702-PB | 811..1614 | 17..820 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 08:14:30 Download gff for
BS09184.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7702-RA | 1331..2134 | 17..820 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:59:44 Download gff for
BS09184.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7702-RA | 1333..2136 | 17..820 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:59:44 Download gff for
BS09184.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18673608..18674411 | 17..820 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 08:14:30 Download gff for
BS09184.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14499330..14500133 | 17..820 | 99 | | Minus |
BS09184.5prime Sequence
852 bp (756 high quality bases) assembled on 2006-01-24
> BS09184.5prime
GAAGTTATCAGTCGACATGAAGCACAAACTTCTGTTGTTGTTCCTTGCAG
GAGCGGCTTTGCTCCTGGCCACTGAAGTTCGGAGCCAACATGAGGACATT
CCGTACCAGCCGGTGAGCAACATCTGCCAGACGTGCCTGTGCCTCAGCAC
CCAGGATGTGGATCATCGGACGCACTTCAACCTGGACTGCTCGGTGAGGA
ATTTCGAGCACATCCTGGCCCGCTGGCCGGAGCAGTTTGGCAGCCAGGCG
ATTGCGTCCGGAGCTGCATCGGAGATTGTCGTCTCGTACTCGGGCAATAG
GATCAAGTTGCTCCAACAGCTGCCGGCCACAAATGCCAGCTTAACTCTCT
CCTGCCGCCACTGTGGCCTACAGGATCTGCAGGCTCCGCTGTTCATGGAC
GTGCCCAATGTGCAGGCCCTTTATATCAGCTGGAATGATATAACTGACGA
TGCCTTGGTGCCGGATCTCTTCAGGGGTCCTTTCCGCAACACTCGCTACG
AGCCGATTGGTTTGCGAGACCTGGACCTGAGCCACAACCGGATAGTTCGA
CTGGATCGCCGGCTCTTCGAGCACACTCCCCACTTGACCAAGTTGAACTT
GGCCTACAACAAGCTGAGTTCCCTGGATGAAGCCACCACAGCCTCCATTG
GATCGGTTGCTACACTGCAGCGACTGGATCTCTCGCACAATGGCCTGATG
ACTTTGCCAGCGCAGCTTTTCTCGAAGCTCACAAGCCTCCGTTTCCTGGA
CGTCTCCGGAAATGAGTTTTCCACGATGCCAGCCAGCCTGCAGCTATTGG
GCAAATCTTTGGTTTCAACTCACTTGGCGGGGAATGCATTTCTCAGCTTG
AA
BS09184.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:22:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7702-PA | 1614 | CG7702-RA | 1..798 | 17..814 | 3990 | 100 | Plus |
| CG7702-PB | 1614 | CG7702-RB | 1..798 | 17..814 | 3990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:33:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7702-RB | 2268 | CG7702-RB | 387..1222 | 17..852 | 4120 | 99.6 | Plus |
| CG7702-RA | 2404 | CG7702-RA | 523..1358 | 17..852 | 4120 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:33:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18672821..18673633 | 40..852 | 3960 | 99.1 | Plus |
Blast to na_te.dros performed on 2015-02-13 02:33:33 has no hits.
BS09184.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:01:58 Download gff for
BS09184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7702-PB | 1..834 | 17..850 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:09:22 Download gff for
BS09184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7702-PB | 1..834 | 17..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:49:50 Download gff for
BS09184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7702-RA | 517..1356 | 9..852 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:44:42 Download gff for
BS09184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7702-RA | 519..1358 | 9..852 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 06:44:42 Download gff for
BS09184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18672822..18673633 | 41..852 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:49:50 Download gff for
BS09184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14498544..14499355 | 41..852 | 99 | | Plus |
BS09184.pep Sequence
Translation from 16 to 1629
> BS09184.pep
MKHKLLLLFLAGAALLLATEVRSQHEDIPYQPVSNICQTCLCLSTQDVDH
RTHFNLDCSVRNFEHILARWPEQFGSQAIASGAASEIVVSYSGNRIKLLQ
QLPATNASLTLSCRHCGLQDLQAPLFMDVPNVQALYISWNDITDDALVPD
LFRGPFRNTRYEPIGLRDLDLSHNRIVRLDRRLFEHTPHLTKLNLAYNKL
SSLDEATTASIGSVATLQRLDLSHNGLMTLPAQLFSKLTSLRFLDVSGNE
FSTMPASLQLLGKSLVQLNLAGNAFLSLKENSLQGLVSLKRLNISSMPSL
RSLEKGALNLPALEHLDCSRNSKLERLELADLLSSRNLSQLDLSWNALTT
LVINATGSSNNSSNSTNETWPRLRRMSISGNPWYCSCELFKALELIGLNH
IDREWDGTEARCETPYLLAGSPLSNLTAERICKMVIPKKYREVDEEPPRF
LRRHYIILTAIIASIVLVIGLVIGFVVVCVRRRLKGSDYGVQPIRYTSVR
GSNLSQFSQLQPVSVASKFNNVHAGSSSGVTTGAANA*
BS09184.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:11:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7702-PB | 537 | CG7702-PB | 1..537 | 1..537 | 2741 | 100 | Plus |
| CG7702-PA | 537 | CG7702-PA | 1..537 | 1..537 | 2741 | 100 | Plus |
| CG5096-PA | 491 | CG5096-PA | 44..382 | 34..385 | 254 | 25.4 | Plus |
| conv-PA | 1092 | CG8561-PA | 676..950 | 166..446 | 231 | 28.4 | Plus |
| conv-PB | 1092 | CG8561-PB | 676..950 | 166..446 | 231 | 28.4 | Plus |
| conv-PA | 1092 | CG8561-PA | 489..738 | 110..349 | 198 | 27.6 | Plus |
| conv-PA | 1092 | CG8561-PA | 389..589 | 164..348 | 167 | 29 | Plus |
| conv-PA | 1092 | CG8561-PA | 677..885 | 109..273 | 164 | 28.1 | Plus |
