Clone Sequence Records
BS09266.3prime Sequence
822 bp (729 high quality bases) assembled on 2006-01-29
> BS09266.3prime
ATGGTCTAGAAAGCTTTTAGTCTTCCTCATTAAGTACGGGATACACGAAG
GTATCGGCGGTATCCTTTCCGACGACGTTGCGGGCTATGCACTTGTAGTT
GCCCATATCCTCCCACTTGATCTCGGAGATCAGAAGATCGCCGTTGGCCA
GCACCCTGTGGCGATGTCCTTGGACGATCTCCTTGTTCTCGTTATTCAAC
CAGGTGATCTCGGCGCGGGGACGGGCGTGCACGCGGCAGGGCAGCTGAAT
GTTGGAGCCCATGAGGTCCAGATGCGTCTTCTCGGTGTAGATGATTCGCG
GTTTCTGGGCACCCGGGTAGGTCTTCTCCGGCGTCAGACGAGAGGAGCGA
GGAGGATGCACCACAGTGCTGGCATAGATGGTCTTGGAGCCAGTGCGTCC
CACACACGTGTAGGTGCGGGCCTCGCTCAGCACGTGGTCGATGATATGCG
ACGATCGGACGCGCACAATGGCACTGGGCGCCTCTTCGGCAACCTGGTTG
GAGTCCAGATCATCGAGCTCCGAGCGGGGCAGGTGACCCACCACCCACTG
GATGCTGGGCACTTGGGAGCCCATCATCTCGCAAACGATCTCGATGGTGG
CTCCATCGGCCTGCTGCAGCTTCGTCGGCGGCGTCTTGGTGAACTTGAGC
CAGTCGGCTTCGAAGGCTCGGTTGCGTGGCTTCTCCTCCTCCGCCTCGAT
GGAGTTATCCACGTCGTTGCTATCGTCTACCAGGTCCACGGCTCTTCCGC
GGACAGTGGCGATGCTGCCGAACAGCAGCAGCGCTAAGGCGCACACATGT
AAATTCATGTCGACTGATAACT
BS09266.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:24:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15009-PA | 801 | ImpL2-RA | 10..801 | 808..17 | 3960 | 100 | Minus |
CG15009-PB | 792 | ImpL2-RB | 1..792 | 808..17 | 3960 | 100 | Minus |
CG15009-PC | 804 | ImpL2-RC | 13..804 | 808..17 | 3960 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 17:57:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL2-RD | 2355 | CG15009-RD | 733..1525 | 808..16 | 3965 | 100 | Minus |
ImpL2-RC | 989 | CG15009-RC | 71..863 | 808..16 | 3965 | 100 | Minus |
ImpL2-RB | 1651 | CG15009-RB | 733..1525 | 808..16 | 3965 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 17:57:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4224927..4225703 | 32..808 | 3885 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 17:57:33 has no hits.
BS09266.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:04:22 Download gff for
BS09266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-PB | 1..792 | 17..808 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:12:27 Download gff for
BS09266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15009-PC | 1..804 | 17..818 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 17:28:35 Download gff for
BS09266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RB | 727..1532 | 7..815 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 20:49:38 Download gff for
BS09266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RB | 727..1532 | 7..815 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 20:49:38 Download gff for
BS09266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4224927..4225709 | 32..816 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 17:28:35 Download gff for
BS09266.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4224927..4225709 | 32..816 | 99 | | Plus |
BS09266.5prime Sequence
822 bp (810 high quality bases) assembled on 2006-01-29
> BS09266.5prime
GAAGTTATCAGTCGACATGAATTTACATGTGTGCGCCTTAGCGCTGCTGC
TGTTCGGCAGCATCGCCACTGTCCGCGGAAGAGCCGTGGACCTGGTAGAC
GATAGCAACGACGTGGATAACTCCATCGAGGCGGAGGAGGAGAAGCCACG
CAACCGAGCCTTCGAAGCCGACTGGCTCAAGTTCACCAAGACGCCGCCGA
CGAAGCTGCAGCAGGCCGATGGAGCCACCATCGAGATCGTTTGCGAGATG
ATGGGCTCCCAAGTGCCCAGCATCCAGTGGGTGGTGGGTCACCTGCCCCG
CTCGGAGCTCGATGATCTGGACTCCAACCAGGTTGCCGAAGAGGCGCCCA
GTGCCATTGTGCGCGTCCGATCGTCGCATATCATCGACCACGTGCTGAGC
GAGGCCCGCACCTACACGTGTGTGGGACGCACTGGCTCCAAGACCATCTA
TGCCAGCACTGTGGTGCATCCTCCTCGCTCCTCTCGTCTGACGCCGGAGA
AGACCTACCCGGGTGCCCAGAAACCGCGAATCATCTACACCGAGAAGACG
CATCTGGACCTCATGGGCTCCAACATTCAGCTGCCCTGCCGCGTGCACGC
CCGTCCCCGCGCCGAGATCACCTGGTTGAATAACGAGAACAAGGAGATCG
TCCAAGGACATCGCCACAGGGTGCTGGCCAACGGCGATCTTCTGATCTCC
GAGATCAAGTGGGAGGATATGGGCAACTACAAGTGCATAGCCCGCAACGT
CGTCGGAAAGGATACCGCCGATACCTTCGTGTATCCCGTACTTAATGAGG
AAGACTAAAAGCTTTCTAGACC
BS09266.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:24:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15009-PA | 801 | ImpL2-RA | 10..801 | 17..808 | 3960 | 100 | Plus |
CG15009-PB | 792 | ImpL2-RB | 1..792 | 17..808 | 3960 | 100 | Plus |
CG15009-PC | 804 | ImpL2-RC | 13..804 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 09:27:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL2-RD | 2355 | CG15009-RD | 733..1525 | 17..809 | 3965 | 100 | Plus |
ImpL2-RC | 989 | CG15009-RC | 71..863 | 17..809 | 3965 | 100 | Plus |
ImpL2-RB | 1651 | CG15009-RB | 733..1525 | 17..809 | 3965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 09:27:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4224927..4225703 | 793..17 | 3885 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 09:27:14 has no hits.
BS09266.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:04:24 Download gff for
BS09266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-PB | 1..792 | 17..808 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:12:28 Download gff for
BS09266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15009-PC | 1..804 | 7..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 18:19:33 Download gff for
BS09266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RB | 727..1532 | 10..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 11:49:32 Download gff for
BS09266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RB | 727..1532 | 10..818 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 11:49:32 Download gff for
BS09266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4224927..4225709 | 9..793 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 18:19:33 Download gff for
BS09266.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4224927..4225709 | 9..793 | 99 | | Minus |
BS09266.complete Sequence
824 bp (824 high quality bases) assembled on 2006-02-16
GenBank Submission: FJ636386
> BS09266.complete
GAAGTTATCAGTCGACATGAATTTACATGTGTGCGCCTTAGCGCTGCTGC
TGTTCGGCAGCATCGCCACTGTCCGCGGAAGAGCCGTGGACCTGGTAGAC
GATAGCAACGACGTGGATAACTCCATCGAGGCGGAGGAGGAGAAGCCACG
CAACCGAGCCTTCGAAGCCGACTGGCTCAAGTTCACCAAGACGCCGCCGA
CGAAGCTGCAGCAGGCCGATGGAGCCACCATCGAGATCGTTTGCGAGATG
ATGGGCTCCCAAGTGCCCAGCATCCAGTGGGTGGTGGGTCACCTGCCCCG
CTCGGAGCTCGATGATCTGGACTCCAACCAGGTTGCCGAAGAGGCGCCCA
GTGCCATTGTGCGCGTCCGATCGTCGCATATCATCGACCACGTGCTGAGC
GAGGCCCGCACCTACACGTGTGTGGGACGCACTGGCTCCAAGACCATCTA
TGCCAGCACTGTGGTGCATCCTCCTCGCTCCTCTCGTCTGACGCCGGAGA
AGACCTACCCGGGTGCCCAGAAACCGCGAATCATCTACACCGAGAAGACG
CATCTGGACCTCATGGGCTCCAACATTCAGCTGCCCTGCCGCGTGCACGC
CCGTCCCCGCGCCGAGATCACCTGGTTGAATAACGAGAACAAGGAGATCG
TCCAAGGACATCGCCACAGGGTGCTGGCCAACGGCGATCTTCTGATCTCC
GAGATCAAGTGGGAGGATATGGGCAACTACAAGTGCATAGCCCGCAACGT
CGTCGGAAAGGATACCGCCGATACCTTCGTGTATCCCGTACTTAATGAGG
AAGACTAAAAGCTTTCTAGACCAT
BS09266.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:54:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL2-RD | 792 | CG15009-PD | 1..792 | 17..808 | 3960 | 100 | Plus |
ImpL2-RC | 804 | CG15009-PC | 13..804 | 17..808 | 3960 | 100 | Plus |
ImpL2-RB | 792 | CG15009-PB | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:54:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL2-RD | 2355 | CG15009-RD | 733..1525 | 17..809 | 3965 | 100 | Plus |
ImpL2-RC | 989 | CG15009-RC | 71..863 | 17..809 | 3965 | 100 | Plus |
ImpL2-RB | 1651 | CG15009-RB | 733..1525 | 17..809 | 3965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:54:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4224927..4225703 | 793..17 | 3885 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:54:39 has no hits.
BS09266.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:41:04 Download gff for
BS09266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RC | 1..804 | 7..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:27:22 Download gff for
BS09266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RC | 63..870 | 10..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:40:32 Download gff for
BS09266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RB | 733..1522 | 17..806 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:41:04 Download gff for
BS09266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RC | 63..870 | 10..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:45:37 Download gff for
BS09266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RB | 733..1522 | 17..806 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:45:37 Download gff for
BS09266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4224927..4225703 | 17..793 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:40:32 Download gff for
BS09266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4224927..4225703 | 17..793 | 100 | | Minus |
BS09266.pep Sequence
Translation from 16 to 807
> BS09266.pep
MNLHVCALALLLFGSIATVRGRAVDLVDDSNDVDNSIEAEEEKPRNRAFE
ADWLKFTKTPPTKLQQADGATIEIVCEMMGSQVPSIQWVVGHLPRSELDD
LDSNQVAEEAPSAIVRVRSSHIIDHVLSEARTYTCVGRTGSKTIYASTVV
HPPRSSRLTPEKTYPGAQKPRIIYTEKTHLDLMGSNIQLPCRVHARPRAE
ITWLNNENKEIVQGHRHRVLANGDLLISEIKWEDMGNYKCIARNVVGKDT
ADTFVYPVLNEED*
BS09266.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:25:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL2-PD | 263 | CG15009-PD | 1..263 | 1..263 | 1375 | 100 | Plus |
ImpL2-PB | 263 | CG15009-PB | 1..263 | 1..263 | 1375 | 100 | Plus |
ImpL2-PA | 266 | CG15009-PA | 4..266 | 1..263 | 1375 | 100 | Plus |
ImpL2-PC | 267 | CG15009-PC | 5..267 | 1..263 | 1375 | 100 | Plus |
Nrg-PH | 1239 | CG1634-PH | 341..512 | 56..252 | 152 | 26.7 | Plus |