Clone Sequence Records
BS09358.3prime Sequence
913 bp (880 high quality bases) assembled on 2006-01-29
> BS09358.3prime
ATGGTCTAGAAAGCTTTCACTTTGGCGTTCGATTGGCGGCGCTGATCTTC
TGCTTCTCGGCATCGGTGAACTCGAGTATGCTCTCGATGGCCTGCAGATG
GCCCTGGGAGTTCTCCTTGTCCGTGAGGAAGTAGAAGATAGCGCTCTTGA
GGAACTGCAGCGTCACCTCCGGATCCACATGGGTGCGATTCTTCTGGGCT
TCCAGCAGGCGGCGATAAATGGTCTTACGCGCGCCAAGTACCCACAAAGA
AATCGCCTCTTTTGCAGTAAGGAGAGCATGATTACTGCCGCACTCTCTCA
TTCTGCACTCTGATGCGCGTATGTTCTCCAACTCGTCCTGCGTGCTCTGC
AACTGATGCAGTAGCTCATTGATCGACACCTTGCTCTCCGGTTGACGCTG
TGCCAAATCCAGTGCCTGATCCGCTCGAGAAATGCGCTCCGCCTCCTGTC
CCTGCTGGTACATGTGCAGGTACATCTTGTTCTGCTTCTCCTCGTGCTCG
ATCAGCTTGCGCTGCAAATCCTCCAGCTGCTTCTCCAGCTCACGGATGCG
CTGCTTGGCCTGCTCATAGTCGGGCACCATGTCCGAGTACCTGGTATTGC
ACTCGGCCAGCTTCTGGAGCAGCGCCTCCACCTTGTCGTTGTGGGATCGC
TTCAGATCGCTAGTGGCGCTGTCCTGACTCCGAATGAGCTCCTCGATCCG
ATGCTCGTACATGCTTATCAGTTCCTGTCGCTGCAGCTCGTAGTTCTCCA
GATTGCTGGCGGAATCACCGCCGGCTCCGCATCCCACATCCGCTTCTCCA
TCGGGCGTGGCTGTGCCGCATGCCTCGCTCTGCGTCTGCGAGTCCTTCGA
GTGCACCGACGACATGGTTAGGTCCTCGAAATGGCCGGAGTCCGCGTAGG
AGCTCTGCATCTC
BS09358.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:25:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14039-PC | 1701 | qtc-RC | 805..1701 | 913..17 | 4485 | 100 | Minus |
| CG14039-PB | 1701 | qtc-RB | 805..1701 | 913..17 | 4485 | 100 | Minus |
| CG14039-PD | 1797 | qtc-RD | 901..1797 | 913..17 | 4485 | 100 | Minus |
| CG14039-PA | 2166 | qtc-RA | 1270..2166 | 913..17 | 4485 | 100 | Minus |
| CG14039-PF | 2166 | qtc-RF | 1270..2166 | 913..17 | 4485 | 100 | Minus |
| CG14039-PG | 1608 | qtc-RG | 805..1401 | 913..317 | 2985 | 100 | Minus |
| CG14039-PE | 2073 | qtc-RE | 1270..1866 | 913..317 | 2985 | 100 | Minus |
| CG14039-PG | 1608 | qtc-RG | 1402..1608 | 223..17 | 1035 | 100 | Minus |
| CG14039-PE | 2073 | qtc-RE | 1867..2073 | 223..17 | 1035 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 04:59:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| qtc-RI | 2384 | CG14039-RI | 1041..1937 | 913..17 | 4485 | 100 | Minus |
| qtc-RF | 2694 | CG14039-RF | 1448..2344 | 913..17 | 4485 | 100 | Minus |
| qtc-RA | 2791 | CG14039-RA | 1448..2344 | 913..17 | 4485 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 04:59:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5067730..5068228 | 913..415 | 2495 | 100 | Minus |
| 2L | 23513712 | 2L | 5070095..5070303 | 225..17 | 1045 | 100 | Minus |
| 2L | 23513712 | 2L | 5068293..5068395 | 418..316 | 515 | 100 | Minus |
| 2L | 23513712 | 2L | 5069127..5069219 | 316..224 | 465 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-01 04:59:52 has no hits.
BS09358.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:07:10 Download gff for
BS09358.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14039-PA | 1270..2166 | 17..913 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:15:56 Download gff for
BS09358.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14039-PD | 901..1797 | 17..913 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 15:10:41 Download gff for
BS09358.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| qtc-RA | 1448..2344 | 17..913 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 05:51:22 Download gff for
BS09358.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| qtc-RA | 1448..2344 | 17..913 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 05:51:22 Download gff for
BS09358.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5067730..5068227 | 416..913 | 100 | -> | Minus |
| 2L | 5068296..5068394 | 317..415 | 100 | -> | Minus |
| 2L | 5069127..5069219 | 224..316 | 100 | -> | Minus |
| 2L | 5070097..5070303 | 17..223 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 15:10:41 Download gff for
BS09358.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5067730..5068227 | 416..913 | 100 | -> | Minus |
| arm_2L | 5068296..5068394 | 317..415 | 100 | -> | Minus |
| arm_2L | 5069127..5069219 | 224..316 | 100 | -> | Minus |
| arm_2L | 5070097..5070303 | 17..223 | 100 | | Minus |
BS09358.5prime Sequence
682 bp (670 high quality bases) assembled on 2006-01-29
> BS09358.5prime
GAAGTTATCAGTCGACATGATGACGTCGCTGCAGCTGGAGACGTCACTGC
CGGCGGTGGAGGAGCAAGTGCAGCGGGAGAAGGACAACGATTCCGCCGAG
GACTCGCACACGGCATCCACAACGCCCACACGCATTCCACATCCCGCCGT
GGCGCGTTTCCGGCGTTCCGCTTCTCTGCGCCTGCGCGGGAATCCCGCAG
AGCTCGGTTTACGGGCTGAGCACTGTCCAGCCGGCGGAGGCGGATTCAGT
TCGCGCGCCAAGCTCACAGCGATCCCATCCAGTCTCGAAACGCGTTCGCA
CCCGGTTCACTTGAGGCGTAATCGCAGCTGGTGCAATTTAGGCCACAAAA
CGGAGCAGGAACCGGAAGTGGAGGCTTCCACGGAGGCACTATGCAACGCC
GCCCAGTGCTTGTCATTGGATAAGGAGGCACTGGCTCCAAAGGTGGGCAA
CAGCAGCATGGCCAACGGCAAGCCGCGAAATTTGTCTCTCCAGTTGAACG
GCGGCAGTGACATCAGCAGCAGTGGCACCTCCAGCAGCAGCAGCAACAAC
AAGGAGTCGTCCCCCAGGACCACCAGGACGCCCAGGACACCGCAGACACC
GCAGACGCCACAAACGCCGGCCAGCGGAGTAGCTGCATCTGTGGCAGAGA
CGCCACACAGCTGCATTCGGCAGGGCAACTGC
BS09358.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:25:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14039-PA | 2166 | qtc-RA | 1..666 | 17..682 | 3330 | 100 | Plus |
| CG14039-PF | 2166 | qtc-RF | 1..666 | 17..682 | 3330 | 100 | Plus |
| CG14039-PE | 2073 | qtc-RE | 1..666 | 17..682 | 3330 | 100 | Plus |
| CG14039-PC | 1701 | qtc-RC | 2..201 | 483..682 | 1000 | 100 | Plus |
| CG14039-PB | 1701 | qtc-RB | 2..201 | 483..682 | 1000 | 100 | Plus |
| CG14039-PG | 1608 | qtc-RG | 2..201 | 483..682 | 1000 | 100 | Plus |
| CG14039-PD | 1797 | qtc-RD | 100..297 | 485..682 | 990 | 100 | Plus |
| CG10225-PA | 1350 | CG10225-RA | 612..638 | 532..558 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:09:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| qtc-RE | 2698 | CG14039-RE | 179..844 | 17..682 | 3330 | 100 | Plus |
| qtc-RF | 2694 | CG14039-RF | 179..844 | 17..682 | 3330 | 100 | Plus |
| qtc-RA | 2791 | CG14039-RA | 179..844 | 17..682 | 3330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:09:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5062743..5063210 | 17..484 | 2340 | 100 | Plus |
| 2L | 23513712 | 2L | 5066869..5067067 | 484..682 | 995 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 17:09:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2806..2985 | 497..679 | 222 | 60.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..6902 | 447..605 | 195 | 62 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6923 | 447..617 | 188 | 61.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6694..6893 | 472..679 | 182 | 58.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6936 | 447..655 | 167 | 58.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2289..2408 | 431..552 | 163 | 63.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2363..2474 | 447..552 | 159 | 63.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6738..6917 | 497..679 | 159 | 58.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2344..2399 | 497..552 | 154 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6759..6924 | 497..662 | 154 | 58.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1103..1156 | 502..555 | 153 | 75.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6877 | 515..673 | 151 | 59 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6817..6944 | 447..574 | 145 | 60.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1039..1161 | 489..610 | 143 | 61.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2414 | 500..619 | 140 | 63.5 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1083..1137 | 497..551 | 140 | 72.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2426 | 448..552 | 138 | 61.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2439..2492 | 499..552 | 135 | 72.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2406..2549 | 448..594 | 134 | 56.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2343..2447 | 448..552 | 128 | 60.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2754..2955 | 488..682 | 128 | 57.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2488 | 505..665 | 127 | 57.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6850..6901 | 501..552 | 125 | 71.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1533..1573 | 511..551 | 124 | 78 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 8617..8672 | 506..560 | 124 | 71.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1047..1128 | 478..551 | 121 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2611..2663 | 497..552 | 120 | 71.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1034..1150 | 503..613 | 119 | 60.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2599..2650 | 497..551 | 115 | 70.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2402..2519 | 447..552 | 113 | 61.3 | Plus |
| R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 647..690 | 543..500 | 112 | 72.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2496..2537 | 511..552 | 111 | 73.8 | Plus |
BS09358.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:07:11 Download gff for
BS09358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14039-PA | 1..666 | 17..682 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:15:57 Download gff for
BS09358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14039-PF | 1..666 | 17..682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:10:44 Download gff for
BS09358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| qtc-RA | 176..844 | 14..682 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:59:48 Download gff for
BS09358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| qtc-RA | 176..844 | 14..682 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:59:48 Download gff for
BS09358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5062734..5063210 | 8..484 | 99 | -> | Plus |
| 2L | 5066870..5067067 | 485..682 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:10:44 Download gff for
BS09358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5062734..5063210 | 8..484 | 99 | -> | Plus |
| arm_2L | 5066870..5067067 | 485..682 | 100 | | Plus |
BS09358.complete Sequence
2198 bp assembled on 2008-08-14
GenBank Submission: FJ636402
> BS09358.complete
GAAGTTATCAGTCGACATGATGACGTCGCTGCAGCTGGAGACGTCACTGC
CGGCGGTGGAGGAGCAAGTGCAGCGGGAGAAGGACAACGATTCCGCCGAG
GACTCGCACACGGCATCCACAACGCCCACACGCATTCCACATCCCGCCGT
GGCGCGTTTCCGGCGTTCCGCTTCTCTGCGCCTGCGCGGGAATCCCGCAG
AGCTCGGTTTACGGGCTGAGCACTGTCCAGCCGGCGGAGGCGGATTCAGT
TCGCGCGCCAAGCTCACAGCGATCCCATCCAGTCTCGAAACGCGTTCGCA
CCCGGTTCACTTGAGGCGTAATCGCAGCTGGTGCAATTTAGGCCACAAAA
CGGAGCAGGAACCGGAAGTGGAGGCTTCCACGGAGGCACTATGCAACGCC
GCCCAGTGCTTGTCATTGGATAAGGAGGCACTGGCTCCAAAGGTGGGCAA
CAGCAGCATGGCCAACGGCAAGCCGCGAAATTTGTCTCTCCAGTTGAACG
GCGGCAGTGACATCAGCAGCAGTGGCACCTCCAGCAGCAGCAGCAACAAC
AAGGAGTCGTCCCCCAGGACCACCAGGACGCCCAGGACACCGCAGACACC
GCAGACGCCACAAACGCCGGCCAGCGGAGTAGCTGCATCTGTGGCAGAGA
CGCCACACAGCTGCATTCGGCAGGGCAACTGCGTCAAGGCCAACCAGGTT
AAACTTTCCACGCTGCACGAGTCCAAGATTTCTCCGAGGACTCCGCCCGT
TACACCGGACTCACCCAGTACCTATCTGGACGATGATATAGACTCGATGT
ACTCGTTCGCTACCACCACTTCGGGTCGCTCCACGATGTCCTGCGAGCAT
CCCTATGTGGCCAGGAACGGCACCACCTTCAGTGGTCGCAAGATGAAGTA
CGTCGTGCATTGCTCCAACTATGCGGGTCAGGTGGGACCCGATTATCTGA
CGCCCACGCAGCGGGCACAGCGCCAGATCCGGCGGCTCAAGGAGCTGCTG
TGCATCGCGCGACAGGATCTGGAGCAGAAGGATACGGAGCTGCTGCGTCT
GACGCGCGAGGTGGTGGAGCTGCGCCTGTTCAAGGCATCGCTCAGTTCGC
CGGAGGAGCGTTCGGCCTCCTCCGATGCGGTCACCGTGCGTGAGGCGGAG
CTGAAGACCTCGCAGGATGTCTCGCCCATCGTCGACATGGTGGACGAGGG
CAACGCAAAGGGCAGTCCACGCCATCTAAGCCGCCAGCAGCAGCAGCAGG
CGAACCACTCACTGCAGGCCATGCAGATGTCGGCGGAGATGCAGAGCTCC
TACGCGGACTCCGGCCATTTCGAGGACCTAACCATGTCGTCGGTGCACTC
GAAGGACTCGCAGACGCAGAGCGAGGCATGCGGCACAGCCACGCCCGATG
GAGAAGCGGATGTGGGATGCGGAGCCGGCGGTGATTCCGCCAGCAATCTG
GAGAACTACGAGCTGCAGCGACAGGAACTGATAAGCATGTACGAGCATCG
GATCGAGGAGCTCATTCGGAGTCAGGACAGCGCCACTAGCGATCTGAAGC
GATCCCACAACGACAAGGTGGAGGCGCTGCTCCAGAAGCTGGCCGAGTGC
AATACCAGGTACTCGGACATGGTGCCCGACTATGAGCAGGCCAAGCAGCG
CATCCGTGAGCTGGAGAAGCAGCTGGAGGATTTGCAGCGCAAGCTGATCG
AGCACGAGGAGAAGCAGAACAAGATGTACCTGCACATGTACCAGCAGGGA
CAGGAGGCGGAGCGCATTTCTCGAGCGGATCAGGCACTGGATTTGGCACA
GCGTCAACCGGAGAGCAAGGTGTCGATCAATGAGCTACTGCATCAGTTGC
AGAGCACGCAGGACGAGTTGGAGAACATACGCGCATCAGAGTGCAGAATG
AGAGAGTGCGGCAGTAATCATGCTCTCCTTACTGCAAAAGAGGCGATTTC
TTTGTGGGTACTTGGCGCGCGTAAGACCATTTATCGCCGCCTGCTGGAAG
CCCAGAAGAATCGCACCCATGTGGATCCGGAGGTGACGCTGCAGTTCCTC
AAGAGCGCTATCTTCTACTTCCTCACGGACAAGGAGAACTCCCAGGGCCA
TCTGCAGGCCATCGAGAGCATACTCGAGTTCACCGATGCCGAGAAGCAGA
AGATCAGCGCCGCCAATCGAACGCCAAAGTGAAAGCTTTCTAGACCAT
BS09358.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:35:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| qtc-RF | 2166 | CG14039-PF | 1..2166 | 17..2182 | 10830 | 100 | Plus |
| qtc-RA | 2166 | CG14039-PA | 1..2166 | 17..2182 | 10830 | 100 | Plus |
| qtc-RE | 2073 | CG14039-PE | 1..1866 | 17..1882 | 9330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:35:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| qtc-RF | 2694 | CG14039-RF | 179..2344 | 17..2182 | 10830 | 100 | Plus |
| qtc-RA | 2791 | CG14039-RA | 179..2344 | 17..2182 | 10830 | 100 | Plus |
| qtc-RI | 2384 | CG14039-RI | 1..1937 | 246..2182 | 9685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:35:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5067307..5068228 | 863..1784 | 4610 | 100 | Plus |
| 2L | 23513712 | 2L | 5062743..5063210 | 17..484 | 2340 | 100 | Plus |
| 2L | 23513712 | 2L | 5066869..5067250 | 484..865 | 1910 | 100 | Plus |
| 2L | 23513712 | 2L | 5070095..5070303 | 1974..2182 | 1045 | 100 | Plus |
| 2L | 23513712 | 2L | 5068293..5068395 | 1781..1883 | 515 | 100 | Plus |
| 2L | 23513712 | 2L | 5069127..5069219 | 1883..1975 | 465 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 13:35:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2806..2985 | 497..679 | 222 | 60.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..6902 | 447..605 | 195 | 62 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6923 | 447..617 | 188 | 61.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6694..6901 | 472..687 | 186 | 58.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6936 | 447..655 | 167 | 58.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2289..2408 | 431..552 | 163 | 63.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2363..2474 | 447..552 | 159 | 63.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6738..6917 | 497..679 | 159 | 58.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2344..2399 | 497..552 | 154 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6901 | 515..693 | 154 | 58.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6759..6924 | 497..662 | 154 | 58.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1103..1156 | 502..555 | 153 | 75.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6840..7037 | 497..697 | 151 | 55 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2492 | 500..696 | 148 | 59.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6817..6944 | 447..574 | 145 | 60.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1039..1161 | 489..610 | 143 | 61.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2426 | 448..552 | 138 | 61.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2439..2492 | 499..552 | 135 | 72.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2406..2549 | 448..594 | 134 | 56.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2754..2967 | 488..694 | 134 | 56.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2488 | 505..665 | 127 | 57.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2611..2808 | 497..694 | 127 | 56.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1533..1573 | 511..551 | 124 | 78 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 8617..8672 | 506..560 | 124 | 71.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1047..1128 | 478..551 | 121 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2599..2650 | 497..551 | 115 | 70.9 | Plus |
BS09358.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:43:34 Download gff for
BS09358.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| qtc-RF | 159..2327 | 14..2182 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:34 Download gff for
BS09358.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| qtc-RA | 179..2343 | 17..2181 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:03:42 Download gff for
BS09358.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| qtc-RF | 162..2326 | 17..2181 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:51:27 Download gff for
BS09358.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| qtc-RA | 179..2343 | 17..2181 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:51:27 Download gff for
BS09358.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5062743..5063210 | 17..484 | 100 | -> | Plus |
| 2L | 5066870..5067249 | 485..864 | 100 | -> | Plus |
| 2L | 5067309..5068227 | 865..1783 | 100 | -> | Plus |
| 2L | 5068296..5068394 | 1784..1882 | 100 | -> | Plus |
| 2L | 5069127..5069219 | 1883..1975 | 100 | -> | Plus |
| 2L | 5070097..5070302 | 1976..2181 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:34 Download gff for
BS09358.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5062743..5063210 | 17..484 | 100 | -> | Plus |
| arm_2L | 5066870..5067249 | 485..864 | 100 | -> | Plus |
| arm_2L | 5067309..5068227 | 865..1783 | 100 | -> | Plus |
| arm_2L | 5068296..5068394 | 1784..1882 | 100 | -> | Plus |
| arm_2L | 5069127..5069219 | 1883..1975 | 100 | -> | Plus |
| arm_2L | 5070097..5070302 | 1976..2181 | 100 | | Plus |
BS09358.pep Sequence
Translation from 16 to 2181
> BS09358.pep
MMTSLQLETSLPAVEEQVQREKDNDSAEDSHTASTTPTRIPHPAVARFRR
SASLRLRGNPAELGLRAEHCPAGGGGFSSRAKLTAIPSSLETRSHPVHLR
RNRSWCNLGHKTEQEPEVEASTEALCNAAQCLSLDKEALAPKVGNSSMAN
GKPRNLSLQLNGGSDISSSGTSSSSSNNKESSPRTTRTPRTPQTPQTPQT
PASGVAASVAETPHSCIRQGNCVKANQVKLSTLHESKISPRTPPVTPDSP
STYLDDDIDSMYSFATTTSGRSTMSCEHPYVARNGTTFSGRKMKYVVHCS
NYAGQVGPDYLTPTQRAQRQIRRLKELLCIARQDLEQKDTELLRLTREVV
ELRLFKASLSSPEERSASSDAVTVREAELKTSQDVSPIVDMVDEGNAKGS
PRHLSRQQQQQANHSLQAMQMSAEMQSSYADSGHFEDLTMSSVHSKDSQT
QSEACGTATPDGEADVGCGAGGDSASNLENYELQRQELISMYEHRIEELI
RSQDSATSDLKRSHNDKVEALLQKLAECNTRYSDMVPDYEQAKQRIRELE
KQLEDLQRKLIEHEEKQNKMYLHMYQQGQEAERISRADQALDLAQRQPES
KVSINELLHQLQSTQDELENIRASECRMRECGSNHALLTAKEAISLWVLG
ARKTIYRRLLEAQKNRTHVDPEVTLQFLKSAIFYFLTDKENSQGHLQAIE
SILEFTDAEKQKISAANRTPK*
BS09358.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:17:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| qtc-PF | 721 | CG14039-PF | 1..721 | 1..721 | 3679 | 100 | Plus |
| qtc-PA | 721 | CG14039-PA | 1..721 | 1..721 | 3679 | 100 | Plus |
| qtc-PE | 690 | CG14039-PE | 1..690 | 1..721 | 3476 | 95.7 | Plus |
| qtc-PI | 574 | CG14039-PI | 1..574 | 148..721 | 2921 | 100 | Plus |
| qtc-PK | 594 | CG14039-PK | 1..566 | 156..721 | 2875 | 99.8 | Plus |
