Clone BS09561 Report

Search the DGRC for BS09561

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:95
Well:61
Vector:pDNR-Dual
Associated Gene/TranscriptCyp4g15-RA
Protein status:BS09561.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS09561.3prime Sequence

881 bp (808 high quality bases) assembled on 2006-04-19

> BS09561.3prime
ATGGTCTAGAAAGCTTTCAACTGGTCCGCGGCTGGAGGCGCACGCGGAAT
CCCTCCTCACGCTTTAGGATGATGTCCGCCTGCAGTTTGAAGTCCGATTC
GGTCAGGTCCGAGTAGACACGGTAGTTCCGCAAAATGGTCGACAGTAGGA
TCTTCAGCTTGAGCATCGCATACTTGCGCCCCACACAGCTGCGTGGTCCC
GCAGAGAACGGCACAAAGGCGTAGTAGTGGCGATTGGCCTGGCGCTCCGG
CAGGAAGTTGTCCGGATCGAAGACGTTGGGATTGGCGTAGACCTTCGGAT
TGCGATGGAGCAGGACGGTGGCCACCGTCACCGTGGCGCCCCTGGGAATC
ACGTAGTTGCCCGAGTTCAGCTTGAGATCCTCCTGCAGCTCGCGGGCGAT
CAATGGAACGGGTGGGTACATGCGCAGCGTCTCCATCAGACACCGCTCCA
GATACTTCATCTCCAGTGTGTCCTGAAATGTGGCCGGTCGCTGGGAGTCG
CCAAAAATGGAGTCGAGTTCGGCCAGTACGCGATCCTGGATGTCCTGGTG
GATGCCCATCAGCGAGAGAAAGAACGAGGAGCCGGCTGCCGTGGTGTCGT
GTCCCTCGAACATGATCGTGTCCACCTGCTCCTTAATTTCCGTGTCCGTA
ATGAGTGCTCCATTCTGTGCACTTTCGAGCATCAAATCAAGGAAGGCCAG
CCGCTTCTTCTCACCAATATCATTGTCCTCCACATCCAGGTCATCCTTGA
GACCAGCCGACTGTCCATAGGACAGTCCCGCCACCGGACTGGCCTTCTCC
TTATCCTTCTCCCGATCCTTCTCATCGCTGCCAGCTGTTGATGGGGTCTG
GTCAACACCACCATTCTGTTCCCGTTCCCGC

BS09561.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG11715-PA 1725 Cyp4g15-RA 861..1725 881..17 4325 100 Minus
CG11715-PB 1137 Cyp4g15-RB 273..1137 881..17 4325 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:28:33
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4g15-RC 2632 CG11715-RC 1396..2261 881..16 4330 100 Minus
Cyp4g15-RA 2505 CG11715-RA 1396..2261 881..16 4330 100 Minus
Cyp4g1-RA 2279 CG3972-RA 1492..1736 291..47 325 76.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:28:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11481805..11482214 881..472 2050 100 Minus
X 23542271 X 11482303..11482602 479..180 1485 99.7 Minus
X 23542271 X 11482697..11482862 181..16 830 100 Minus
X 23542271 X 467600..467844 47..291 325 75.5 Plus
Blast to na_te.dros performed on 2015-02-11 12:28:31 has no hits.

BS09561.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:13:35 Download gff for BS09561.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11715-PB 273..1137 17..881 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:24:51 Download gff for BS09561.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11715-PB 273..1137 17..881 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 21:43:47 Download gff for BS09561.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 1396..2261 16..881 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:32:08 Download gff for BS09561.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 1396..2261 16..881 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:32:08 Download gff for BS09561.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11481805..11482213 473..881 100 -> Minus
X 11482310..11482601 181..472 100 -> Minus
X 11482698..11482862 16..180 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 21:43:47 Download gff for BS09561.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11375838..11376246 473..881 100 -> Minus
arm_X 11376343..11376634 181..472 100 -> Minus
arm_X 11376731..11376895 16..180 100   Minus

BS09561.5prime Sequence

888 bp (743 high quality bases) assembled on 2006-04-19

> BS09561.5prime
GAAGTTATCAGTCGACATGGAGGTGCTGAAGAAGGACGCCGCCCTGGGCT
CACCCAGCAGCGTCTTCTACTTCCTGCTGCTGCCCACGCTGGTGCTTTGG
TACATCTACTGGCGATTATCGCGGGCTCACCTGTACAGGTTGGCCGGACG
ACTGCCGGGACCACGGGGACTGCCCATCGTGGGTCATCTGTTCGATGTGA
TTGGACCCGCTTCATCTGTTTTCCGAACAGTCATCCGCAAAAGCGCCCCT
TTCGAGCACATAGCCAAGATGTGGATCGGGCCCAAGCTGGTGGTCTTCAT
CTACGATCCGCGGGACGTGGAGTTGCTGCTGAGCAGCCATGTCTACATCG
ACAAGGCATCCGAGTACAAGTTCTTCAAGCCCTGGCTGGGCGACGGACTG
CTGATCAGCACAGGTCAAAAATGGCGATCGCACCGCAAACTGATTGCACC
CACATTCCATCTGAATGTCTTGAAGAGCTTCATCGAGTTGTTCAACGAGA
ACTCGCGTAATGTGGTGAGGAAACTGCGTGCGGAGGATGGTCGCACTTTT
GATTGCCATGATTACATGAGCGAGGCAACCGTGGAGATTCTATTGGAGAC
TGCGATGGGTGTGTCGAAGAAAACGCAGGACAAATCGGGATTCGAGTATG
CGATGGCCGTGATGCGGATGTGCGACATCCTTCACGCCCGCCATCGGAGC
ATCTTTCTGCGCAACGAGTTCGTGTTCACCCTGACGCGCTACTACAAGGA
GCAGGGTCGCCTGCTGAACATCATCCACGGCCTGACCACCAAGGTGATCC
GCAGCAAGAAGGCGGCCTTTGAGCANGGCACCCGTGGATCCCTTGCCCAG
TGCGAGCTGAAAGCAGCCGCCCTAGAGCGGGGACGGGA

BS09561.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG11715-PA 1725 Cyp4g15-RA 1..872 17..888 4266 99.5 Plus
CG11715-PB 1137 Cyp4g15-RB 1..284 605..888 1326 98.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:16:12
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4g15-RC 2632 CG11715-RC 536..1407 17..888 4304 99.5 Plus
Cyp4g15-RA 2505 CG11715-RA 536..1407 17..888 4304 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11481524..11481816 596..888 1409 98.6 Plus
X 23542271 X 11478384..11478583 216..415 1000 100 Plus
X 23542271 X 11477593..11477791 17..215 995 100 Plus
X 23542271 X 11479011..11479196 411..596 930 100 Plus
Blast to na_te.dros performed on 2015-02-11 13:16:11 has no hits.

BS09561.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:13:36 Download gff for BS09561.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11715-PA 1..871 17..887 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:24:52 Download gff for BS09561.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11715-PA 1..871 17..887 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:20:53 Download gff for BS09561.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 532..1406 10..887 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:40:25 Download gff for BS09561.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 532..1406 10..887 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:40:25 Download gff for BS09561.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11477589..11477791 10..215 98 -> Plus
X 11478384..11478581 216..413 100 -> Plus
X 11479014..11479196 414..596 100 -> Plus
X 11481525..11481815 597..887 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:20:53 Download gff for BS09561.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11371622..11371824 10..215 98 -> Plus
arm_X 11372417..11372614 216..413 100 -> Plus
arm_X 11373047..11373229 414..596 100 -> Plus
arm_X 11375558..11375848 597..887 98   Plus

BS09561.complete Sequence

1757 bp assembled on 2007-10-31

GenBank Submission: FJ636444

> BS09561.complete
GAAGTTATCAGTCGACATGGAGGTGCTGAAGAAGGACGCCGCCCTGGGCT
CACCCAGCAGCGTCTTCTACTTCCTGCTGCTGCCCACGCTGGTGCTTTGG
TACATCTACTGGCGATTATCGCGGGCTCACCTGTACAGGTTGGCCGGACG
ACTGCCGGGACCACGGGGACTGCCCATCGTGGGTCATCTGTTCGATGTGA
TTGGACCCGCTTCATCTGTTTTCCGAACAGTCATCCGCAAAAGCGCCCCT
TTCGAGCACATAGCCAAGATGTGGATCGGGCCCAAGCTGGTGGTCTTCAT
CTACGATCCGCGGGACGTGGAGTTGCTGCTGAGCAGCCATGTCTACATCG
ACAAGGCATCCGAGTACAAGTTCTTCAAGCCCTGGCTGGGCGACGGACTG
CTGATCAGCACAGGTCAAAAATGGCGATCGCACCGCAAACTGATTGCACC
CACATTCCATCTGAATGTCTTGAAGAGCTTCATCGAGTTGTTCAACGAGA
ACTCGCGTAATGTGGTGAGGAAACTGCGTGCGGAGGATGGTCGCACTTTT
GATTGCCATGATTACATGAGCGAGGCAACCGTGGAGATTCTATTGGAGAC
TGCGATGGGTGTGTCGAAGAAAACGCAGGACAAATCGGGATTCGAGTATG
CGATGGCCGTGATGCGGATGTGCGACATCCTTCACGCCCGCCATCGGAGC
ATCTTTCTGCGCAACGAGTTCGTGTTCACCCTGACGCGCTACTACAAGGA
GCAGGGTCGCCTGCTGAACATCATCCACGGCCTGACCACCAAGGTGATCC
GCAGCAAGAAGGCGGCCTTTGAGCAGGGCACCCGTGGATCCCTTGCCCAG
TGCGAGCTGAAAGCAGCCGCCCTAGAGCGGGAACGGGAACAGAATGGTGG
TGTTGACCAGACCCCATCAACAGCTGGCAGCGATGAGAAGGATCGGGAGA
AGGATAAGGAGAAGGCCAGTCCGGTGGCGGGACTGTCCTATGGACAGTCG
GCTGGTCTCAAGGATGACCTGGATGTGGAGGACAATGATATTGGTGAGAA
GAAGCGGCTGGCCTTCCTTGATTTGATGCTCGAAAGTGCACAGAATGGAG
CACTCATTACGGACACGGAAATTAAGGAGCAGGTGGACACGATCATGTTC
GAGGGACACGACACCACGGCAGCCGGCTCCTCGTTCTTTCTCTCGCTGAT
GGGCATCCACCAGGACATCCAGGATCGCGTACTGGCCGAACTCGACTCCA
TTTTTGGCGACTCCCAGCGACCGGCCACATTTCAGGACACACTGGAGATG
AAGTATCTGGAGCGGTGTCTGATGGAGACGCTGCGCATGTACCCACCCGT
TCCATTGATCGCCCGCGAGCTGCAGGAGGATCTCAAGCTGAACTCGGGCA
ACTACGTGATTCCCAGGGGCGCCACGGTGACGGTGGCCACCGTCCTGCTC
CATCGCAATCCGAAGGTCTACGCCAATCCCAACGTCTTCGATCCGGACAA
CTTCCTGCCGGAGCGCCAGGCCAATCGCCACTACTACGCCTTTGTGCCGT
TCTCTGCGGGACCACGCAGCTGTGTGGGGCGCAAGTATGCGATGCTCAAG
CTGAAGATCCTACTGTCGACCATTTTGCGGAACTACCGTGTCTACTCGGA
CCTGACCGAATCGGACTTCAAACTGCAGGCGGACATCATCCTAAAGCGTG
AGGAGGGATTCCGCGTGCGCCTCCAGCCGCGGACCAGTTGAAAGCTTTCT
AGACCAT

BS09561.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:24:47
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4g15-RC 1725 CG11715-PC 1..1725 17..1741 8595 99.9 Plus
Cyp4g15-RA 1725 CG11715-PA 1..1725 17..1741 8595 99.9 Plus
Cyp4g1-RA 1671 CG3972-PA 1385..1629 1467..1711 325 75.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:24:48
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4g15-RC 2632 CG11715-RC 536..2261 17..1742 8600 99.9 Plus
Cyp4g15-RA 2505 CG11715-RA 536..2261 17..1742 8600 99.9 Plus
Cyp4g1-RA 2279 CG3972-RA 1492..1736 1467..1711 325 75.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:24:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11481524..11482214 596..1286 3425 99.7 Plus
X 23542271 X 11482303..11482602 1279..1578 1485 99.7 Plus
X 23542271 X 11478384..11478583 216..415 1000 100 Plus
X 23542271 X 11477593..11477791 17..215 995 100 Plus
X 23542271 X 11479011..11479196 411..596 930 100 Plus
X 23542271 X 11482697..11482862 1577..1742 830 100 Plus
X 23542271 X 467600..467844 1711..1467 325 75.5 Minus
Blast to na_te.dros performed on 2014-11-27 16:24:46 has no hits.

BS09561.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:10:23 Download gff for BS09561.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 1..1725 17..1741 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:40:27 Download gff for BS09561.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 509..2238 10..1742 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:25 Download gff for BS09561.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 536..2259 17..1740 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:50:06 Download gff for BS09561.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 513..2236 17..1740 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:17:53 Download gff for BS09561.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4g15-RA 536..2259 17..1740 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:17:53 Download gff for BS09561.complete
Subject Subject Range Query Range Percent Splice Strand
X 11478384..11478581 216..413 100 -> Plus
X 11479014..11479196 414..596 100 -> Plus
X 11482310..11482601 1286..1577 100 -> Plus
X 11482698..11482860 1578..1740 100   Plus
X 11477593..11477791 17..215 100 -> Plus
X 11481525..11482213 597..1285 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:25 Download gff for BS09561.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11371626..11371824 17..215 100 -> Plus
arm_X 11372417..11372614 216..413 100 -> Plus
arm_X 11373047..11373229 414..596 100 -> Plus
arm_X 11375558..11376246 597..1285 99 -> Plus
arm_X 11376343..11376634 1286..1577 100 -> Plus
arm_X 11376731..11376893 1578..1740 100   Plus

BS09561.pep Sequence

Translation from 16 to 1740

> BS09561.pep
MEVLKKDAALGSPSSVFYFLLLPTLVLWYIYWRLSRAHLYRLAGRLPGPR
GLPIVGHLFDVIGPASSVFRTVIRKSAPFEHIAKMWIGPKLVVFIYDPRD
VELLLSSHVYIDKASEYKFFKPWLGDGLLISTGQKWRSHRKLIAPTFHLN
VLKSFIELFNENSRNVVRKLRAEDGRTFDCHDYMSEATVEILLETAMGVS
KKTQDKSGFEYAMAVMRMCDILHARHRSIFLRNEFVFTLTRYYKEQGRLL
NIIHGLTTKVIRSKKAAFEQGTRGSLAQCELKAAALEREREQNGGVDQTP
STAGSDEKDREKDKEKASPVAGLSYGQSAGLKDDLDVEDNDIGEKKRLAF
LDLMLESAQNGALITDTEIKEQVDTIMFEGHDTTAAGSSFFLSLMGIHQD
IQDRVLAELDSIFGDSQRPATFQDTLEMKYLERCLMETLRMYPPVPLIAR
ELQEDLKLNSGNYVIPRGATVTVATVLLHRNPKVYANPNVFDPDNFLPER
QANRHYYAFVPFSAGPRSCVGRKYAMLKLKILLSTILRNYRVYSDLTESD
FKLQADIILKREEGFRVRLQPRTS*

BS09561.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:26:20
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4g15-PC 574 CG11715-PC 1..574 1..574 2957 100 Plus
Cyp4g15-PA 574 CG11715-PA 1..574 1..574 2957 100 Plus
Cyp4g1-PA 556 CG3972-PA 8..550 2..572 1367 48.2 Plus
Cyp4c3-PA 535 CG1438-PA 27..534 12..572 972 35.7 Plus
Cyp4s3-PA 495 CG9081-PA 4..488 20..572 770 33.8 Plus