Clone Sequence Records
BS09561.3prime Sequence
881 bp (808 high quality bases) assembled on 2006-04-19
> BS09561.3prime
ATGGTCTAGAAAGCTTTCAACTGGTCCGCGGCTGGAGGCGCACGCGGAAT
CCCTCCTCACGCTTTAGGATGATGTCCGCCTGCAGTTTGAAGTCCGATTC
GGTCAGGTCCGAGTAGACACGGTAGTTCCGCAAAATGGTCGACAGTAGGA
TCTTCAGCTTGAGCATCGCATACTTGCGCCCCACACAGCTGCGTGGTCCC
GCAGAGAACGGCACAAAGGCGTAGTAGTGGCGATTGGCCTGGCGCTCCGG
CAGGAAGTTGTCCGGATCGAAGACGTTGGGATTGGCGTAGACCTTCGGAT
TGCGATGGAGCAGGACGGTGGCCACCGTCACCGTGGCGCCCCTGGGAATC
ACGTAGTTGCCCGAGTTCAGCTTGAGATCCTCCTGCAGCTCGCGGGCGAT
CAATGGAACGGGTGGGTACATGCGCAGCGTCTCCATCAGACACCGCTCCA
GATACTTCATCTCCAGTGTGTCCTGAAATGTGGCCGGTCGCTGGGAGTCG
CCAAAAATGGAGTCGAGTTCGGCCAGTACGCGATCCTGGATGTCCTGGTG
GATGCCCATCAGCGAGAGAAAGAACGAGGAGCCGGCTGCCGTGGTGTCGT
GTCCCTCGAACATGATCGTGTCCACCTGCTCCTTAATTTCCGTGTCCGTA
ATGAGTGCTCCATTCTGTGCACTTTCGAGCATCAAATCAAGGAAGGCCAG
CCGCTTCTTCTCACCAATATCATTGTCCTCCACATCCAGGTCATCCTTGA
GACCAGCCGACTGTCCATAGGACAGTCCCGCCACCGGACTGGCCTTCTCC
TTATCCTTCTCCCGATCCTTCTCATCGCTGCCAGCTGTTGATGGGGTCTG
GTCAACACCACCATTCTGTTCCCGTTCCCGC
BS09561.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:30:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11715-PA | 1725 | Cyp4g15-RA | 861..1725 | 881..17 | 4325 | 100 | Minus |
CG11715-PB | 1137 | Cyp4g15-RB | 273..1137 | 881..17 | 4325 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:28:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4g15-RC | 2632 | CG11715-RC | 1396..2261 | 881..16 | 4330 | 100 | Minus |
Cyp4g15-RA | 2505 | CG11715-RA | 1396..2261 | 881..16 | 4330 | 100 | Minus |
Cyp4g1-RA | 2279 | CG3972-RA | 1492..1736 | 291..47 | 325 | 76.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:28:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11481805..11482214 | 881..472 | 2050 | 100 | Minus |
X | 23542271 | X | 11482303..11482602 | 479..180 | 1485 | 99.7 | Minus |
X | 23542271 | X | 11482697..11482862 | 181..16 | 830 | 100 | Minus |
X | 23542271 | X | 467600..467844 | 47..291 | 325 | 75.5 | Plus |
Blast to na_te.dros performed on 2015-02-11 12:28:31 has no hits.
BS09561.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:13:35 Download gff for
BS09561.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11715-PB | 273..1137 | 17..881 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:24:51 Download gff for
BS09561.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11715-PB | 273..1137 | 17..881 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 21:43:47 Download gff for
BS09561.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 1396..2261 | 16..881 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:32:08 Download gff for
BS09561.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 1396..2261 | 16..881 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:32:08 Download gff for
BS09561.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11481805..11482213 | 473..881 | 100 | -> | Minus |
X | 11482310..11482601 | 181..472 | 100 | -> | Minus |
X | 11482698..11482862 | 16..180 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 21:43:47 Download gff for
BS09561.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11375838..11376246 | 473..881 | 100 | -> | Minus |
arm_X | 11376343..11376634 | 181..472 | 100 | -> | Minus |
arm_X | 11376731..11376895 | 16..180 | 100 | | Minus |
BS09561.5prime Sequence
888 bp (743 high quality bases) assembled on 2006-04-19
> BS09561.5prime
GAAGTTATCAGTCGACATGGAGGTGCTGAAGAAGGACGCCGCCCTGGGCT
CACCCAGCAGCGTCTTCTACTTCCTGCTGCTGCCCACGCTGGTGCTTTGG
TACATCTACTGGCGATTATCGCGGGCTCACCTGTACAGGTTGGCCGGACG
ACTGCCGGGACCACGGGGACTGCCCATCGTGGGTCATCTGTTCGATGTGA
TTGGACCCGCTTCATCTGTTTTCCGAACAGTCATCCGCAAAAGCGCCCCT
TTCGAGCACATAGCCAAGATGTGGATCGGGCCCAAGCTGGTGGTCTTCAT
CTACGATCCGCGGGACGTGGAGTTGCTGCTGAGCAGCCATGTCTACATCG
ACAAGGCATCCGAGTACAAGTTCTTCAAGCCCTGGCTGGGCGACGGACTG
CTGATCAGCACAGGTCAAAAATGGCGATCGCACCGCAAACTGATTGCACC
CACATTCCATCTGAATGTCTTGAAGAGCTTCATCGAGTTGTTCAACGAGA
ACTCGCGTAATGTGGTGAGGAAACTGCGTGCGGAGGATGGTCGCACTTTT
GATTGCCATGATTACATGAGCGAGGCAACCGTGGAGATTCTATTGGAGAC
TGCGATGGGTGTGTCGAAGAAAACGCAGGACAAATCGGGATTCGAGTATG
CGATGGCCGTGATGCGGATGTGCGACATCCTTCACGCCCGCCATCGGAGC
ATCTTTCTGCGCAACGAGTTCGTGTTCACCCTGACGCGCTACTACAAGGA
GCAGGGTCGCCTGCTGAACATCATCCACGGCCTGACCACCAAGGTGATCC
GCAGCAAGAAGGCGGCCTTTGAGCANGGCACCCGTGGATCCCTTGCCCAG
TGCGAGCTGAAAGCAGCCGCCCTAGAGCGGGGACGGGA
BS09561.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:30:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11715-PA | 1725 | Cyp4g15-RA | 1..872 | 17..888 | 4266 | 99.5 | Plus |
CG11715-PB | 1137 | Cyp4g15-RB | 1..284 | 605..888 | 1326 | 98.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:16:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4g15-RC | 2632 | CG11715-RC | 536..1407 | 17..888 | 4304 | 99.5 | Plus |
Cyp4g15-RA | 2505 | CG11715-RA | 536..1407 | 17..888 | 4304 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:16:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11481524..11481816 | 596..888 | 1409 | 98.6 | Plus |
X | 23542271 | X | 11478384..11478583 | 216..415 | 1000 | 100 | Plus |
X | 23542271 | X | 11477593..11477791 | 17..215 | 995 | 100 | Plus |
X | 23542271 | X | 11479011..11479196 | 411..596 | 930 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 13:16:11 has no hits.
BS09561.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:13:36 Download gff for
BS09561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11715-PA | 1..871 | 17..887 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:24:52 Download gff for
BS09561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11715-PA | 1..871 | 17..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:20:53 Download gff for
BS09561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 532..1406 | 10..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:40:25 Download gff for
BS09561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 532..1406 | 10..887 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:40:25 Download gff for
BS09561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11477589..11477791 | 10..215 | 98 | -> | Plus |
X | 11478384..11478581 | 216..413 | 100 | -> | Plus |
X | 11479014..11479196 | 414..596 | 100 | -> | Plus |
X | 11481525..11481815 | 597..887 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:20:53 Download gff for
BS09561.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11371622..11371824 | 10..215 | 98 | -> | Plus |
arm_X | 11372417..11372614 | 216..413 | 100 | -> | Plus |
arm_X | 11373047..11373229 | 414..596 | 100 | -> | Plus |
arm_X | 11375558..11375848 | 597..887 | 98 | | Plus |
BS09561.complete Sequence
1757 bp assembled on 2007-10-31
GenBank Submission: FJ636444
> BS09561.complete
GAAGTTATCAGTCGACATGGAGGTGCTGAAGAAGGACGCCGCCCTGGGCT
CACCCAGCAGCGTCTTCTACTTCCTGCTGCTGCCCACGCTGGTGCTTTGG
TACATCTACTGGCGATTATCGCGGGCTCACCTGTACAGGTTGGCCGGACG
ACTGCCGGGACCACGGGGACTGCCCATCGTGGGTCATCTGTTCGATGTGA
TTGGACCCGCTTCATCTGTTTTCCGAACAGTCATCCGCAAAAGCGCCCCT
TTCGAGCACATAGCCAAGATGTGGATCGGGCCCAAGCTGGTGGTCTTCAT
CTACGATCCGCGGGACGTGGAGTTGCTGCTGAGCAGCCATGTCTACATCG
ACAAGGCATCCGAGTACAAGTTCTTCAAGCCCTGGCTGGGCGACGGACTG
CTGATCAGCACAGGTCAAAAATGGCGATCGCACCGCAAACTGATTGCACC
CACATTCCATCTGAATGTCTTGAAGAGCTTCATCGAGTTGTTCAACGAGA
ACTCGCGTAATGTGGTGAGGAAACTGCGTGCGGAGGATGGTCGCACTTTT
GATTGCCATGATTACATGAGCGAGGCAACCGTGGAGATTCTATTGGAGAC
TGCGATGGGTGTGTCGAAGAAAACGCAGGACAAATCGGGATTCGAGTATG
CGATGGCCGTGATGCGGATGTGCGACATCCTTCACGCCCGCCATCGGAGC
ATCTTTCTGCGCAACGAGTTCGTGTTCACCCTGACGCGCTACTACAAGGA
GCAGGGTCGCCTGCTGAACATCATCCACGGCCTGACCACCAAGGTGATCC
GCAGCAAGAAGGCGGCCTTTGAGCAGGGCACCCGTGGATCCCTTGCCCAG
TGCGAGCTGAAAGCAGCCGCCCTAGAGCGGGAACGGGAACAGAATGGTGG
TGTTGACCAGACCCCATCAACAGCTGGCAGCGATGAGAAGGATCGGGAGA
AGGATAAGGAGAAGGCCAGTCCGGTGGCGGGACTGTCCTATGGACAGTCG
GCTGGTCTCAAGGATGACCTGGATGTGGAGGACAATGATATTGGTGAGAA
GAAGCGGCTGGCCTTCCTTGATTTGATGCTCGAAAGTGCACAGAATGGAG
CACTCATTACGGACACGGAAATTAAGGAGCAGGTGGACACGATCATGTTC
GAGGGACACGACACCACGGCAGCCGGCTCCTCGTTCTTTCTCTCGCTGAT
GGGCATCCACCAGGACATCCAGGATCGCGTACTGGCCGAACTCGACTCCA
TTTTTGGCGACTCCCAGCGACCGGCCACATTTCAGGACACACTGGAGATG
AAGTATCTGGAGCGGTGTCTGATGGAGACGCTGCGCATGTACCCACCCGT
TCCATTGATCGCCCGCGAGCTGCAGGAGGATCTCAAGCTGAACTCGGGCA
ACTACGTGATTCCCAGGGGCGCCACGGTGACGGTGGCCACCGTCCTGCTC
CATCGCAATCCGAAGGTCTACGCCAATCCCAACGTCTTCGATCCGGACAA
CTTCCTGCCGGAGCGCCAGGCCAATCGCCACTACTACGCCTTTGTGCCGT
TCTCTGCGGGACCACGCAGCTGTGTGGGGCGCAAGTATGCGATGCTCAAG
CTGAAGATCCTACTGTCGACCATTTTGCGGAACTACCGTGTCTACTCGGA
CCTGACCGAATCGGACTTCAAACTGCAGGCGGACATCATCCTAAAGCGTG
AGGAGGGATTCCGCGTGCGCCTCCAGCCGCGGACCAGTTGAAAGCTTTCT
AGACCAT
BS09561.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:24:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4g15-RC | 1725 | CG11715-PC | 1..1725 | 17..1741 | 8595 | 99.9 | Plus |
Cyp4g15-RA | 1725 | CG11715-PA | 1..1725 | 17..1741 | 8595 | 99.9 | Plus |
Cyp4g1-RA | 1671 | CG3972-PA | 1385..1629 | 1467..1711 | 325 | 75.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:24:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4g15-RC | 2632 | CG11715-RC | 536..2261 | 17..1742 | 8600 | 99.9 | Plus |
Cyp4g15-RA | 2505 | CG11715-RA | 536..2261 | 17..1742 | 8600 | 99.9 | Plus |
Cyp4g1-RA | 2279 | CG3972-RA | 1492..1736 | 1467..1711 | 325 | 75.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:24:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11481524..11482214 | 596..1286 | 3425 | 99.7 | Plus |
X | 23542271 | X | 11482303..11482602 | 1279..1578 | 1485 | 99.7 | Plus |
X | 23542271 | X | 11478384..11478583 | 216..415 | 1000 | 100 | Plus |
X | 23542271 | X | 11477593..11477791 | 17..215 | 995 | 100 | Plus |
X | 23542271 | X | 11479011..11479196 | 411..596 | 930 | 100 | Plus |
X | 23542271 | X | 11482697..11482862 | 1577..1742 | 830 | 100 | Plus |
X | 23542271 | X | 467600..467844 | 1711..1467 | 325 | 75.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:24:46 has no hits.
BS09561.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:10:23 Download gff for
BS09561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 1..1725 | 17..1741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:40:27 Download gff for
BS09561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 509..2238 | 10..1742 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:25 Download gff for
BS09561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 536..2259 | 17..1740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:50:06 Download gff for
BS09561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 513..2236 | 17..1740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:17:53 Download gff for
BS09561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4g15-RA | 536..2259 | 17..1740 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:17:53 Download gff for
BS09561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11478384..11478581 | 216..413 | 100 | -> | Plus |
X | 11479014..11479196 | 414..596 | 100 | -> | Plus |
X | 11482310..11482601 | 1286..1577 | 100 | -> | Plus |
X | 11482698..11482860 | 1578..1740 | 100 | | Plus |
X | 11477593..11477791 | 17..215 | 100 | -> | Plus |
X | 11481525..11482213 | 597..1285 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:25 Download gff for
BS09561.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11371626..11371824 | 17..215 | 100 | -> | Plus |
arm_X | 11372417..11372614 | 216..413 | 100 | -> | Plus |
arm_X | 11373047..11373229 | 414..596 | 100 | -> | Plus |
arm_X | 11375558..11376246 | 597..1285 | 99 | -> | Plus |
arm_X | 11376343..11376634 | 1286..1577 | 100 | -> | Plus |
arm_X | 11376731..11376893 | 1578..1740 | 100 | | Plus |
BS09561.pep Sequence
Translation from 16 to 1740
> BS09561.pep
MEVLKKDAALGSPSSVFYFLLLPTLVLWYIYWRLSRAHLYRLAGRLPGPR
GLPIVGHLFDVIGPASSVFRTVIRKSAPFEHIAKMWIGPKLVVFIYDPRD
VELLLSSHVYIDKASEYKFFKPWLGDGLLISTGQKWRSHRKLIAPTFHLN
VLKSFIELFNENSRNVVRKLRAEDGRTFDCHDYMSEATVEILLETAMGVS
KKTQDKSGFEYAMAVMRMCDILHARHRSIFLRNEFVFTLTRYYKEQGRLL
NIIHGLTTKVIRSKKAAFEQGTRGSLAQCELKAAALEREREQNGGVDQTP
STAGSDEKDREKDKEKASPVAGLSYGQSAGLKDDLDVEDNDIGEKKRLAF
LDLMLESAQNGALITDTEIKEQVDTIMFEGHDTTAAGSSFFLSLMGIHQD
IQDRVLAELDSIFGDSQRPATFQDTLEMKYLERCLMETLRMYPPVPLIAR
ELQEDLKLNSGNYVIPRGATVTVATVLLHRNPKVYANPNVFDPDNFLPER
QANRHYYAFVPFSAGPRSCVGRKYAMLKLKILLSTILRNYRVYSDLTESD
FKLQADIILKREEGFRVRLQPRTS*
BS09561.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:26:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4g15-PC | 574 | CG11715-PC | 1..574 | 1..574 | 2957 | 100 | Plus |
Cyp4g15-PA | 574 | CG11715-PA | 1..574 | 1..574 | 2957 | 100 | Plus |
Cyp4g1-PA | 556 | CG3972-PA | 8..550 | 2..572 | 1367 | 48.2 | Plus |
Cyp4c3-PA | 535 | CG1438-PA | 27..534 | 12..572 | 972 | 35.7 | Plus |
Cyp4s3-PA | 495 | CG9081-PA | 4..488 | 20..572 | 770 | 33.8 | Plus |