Clone BS09596 Report

Search the DGRC for BS09596

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:95
Well:96
Vector:pDNR-Dual
Associated Gene/TranscriptCG14969-RA
Protein status:BS09596.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS09596.3prime Sequence

923 bp (853 high quality bases) assembled on 2006-04-19

> BS09596.3prime
ATGGTCTAGAAAGCTTTTACGCGCGTTTGGGCTTTTCAAGAGGCTCATCG
TCACTGGAGTAGTCGGATGCGGGACTGTGAGCAACCTTTTTCCCCCTAGG
AGGTTCTTCATCACTGGACTCGTCCAACAGGTGTGTTCCAGCACCGATCA
ATACATTGGCGATCTTTTCTGTTCGGGCGGAGATTGCAACAGGATCCTCT
GTTGAAGTGGACAGCACGGCAGCCGTGATAAGCGTCGACGTGGAGGGCGC
GTCCAGTTCAGGTTCCTGCTCATTGAGCAAGCCATGATTGGCCTCCCGCC
GCTTGGTCACTACAACTGCCGTAATATAGAAGGTGAAAATGGGCAGCAGG
ACAACTACGCCAACGGCGATGAGAAAATTGGTCAGCTTCACCTCGCGTTG
ACAGCATTTCAGCGTTTTCGACCAATTCAGACGAGTCCGGTTCATATTGT
CCTGCAGATCGAAGCACACACTTCCACCGACTTTCTTTTCCATGCTAAGG
TAGAAATCATTTAGACTCACGTAATCATTTTTGCACTTGAAGCAAACTAA
ATCCGAACTAGCAGATTCTAAGCAATTTTGCAACTTTGTTGAGTTATCGC
TGTATACAATCCAAAAATTATCCCTGAAGCAATTTTCGCAGTTGGCCTTT
TGCCACAGGCTAGTTAGGATTCCTTGGGTGGTAGCCACTATATTGATCCT
GTCCGAGTTCAGATAACGCTTGGAACAGTTGGCGTTCGCAATTAGGTTTC
CGTAATCATTGGTGAGATTGCGGTAGAGATCGACGCAGCCCTCACACAAA
TTCACGGGCACTGATTTTGTGGTGGCGCAGTAGATGAACTTGCTCTGTGC
ATCGCCAAGATCGGCGAGCAATTTCTCGCAGGAATGGTTCTTTCCGGCCA
GCAGCATGTTAAACTGTCCACTT

BS09596.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:31:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14969-PA 948 CG14969-RA 42..948 923..17 4485 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:26:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14969-RA 1636 CG14969-RA 404..1310 923..17 4505 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 09:26:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3334227..3334516 634..923 1420 99.3 Plus
3L 28110227 3L 3333445..3333693 17..265 1245 100 Plus
3L 28110227 3L 3333984..3334171 446..633 940 100 Plus
3L 28110227 3L 3333745..3333925 265..445 905 100 Plus
Blast to na_te.dros performed on 2015-02-01 09:26:36 has no hits.

BS09596.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:14:48 Download gff for BS09596.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14969-PA 42..948 17..923 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:26:26 Download gff for BS09596.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14969-PA 42..948 17..923 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:18:12 Download gff for BS09596.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14969-RA 404..1310 17..923 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:56:54 Download gff for BS09596.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14969-RA 404..1310 17..923 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 11:56:54 Download gff for BS09596.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 3333445..3333692 17..264 100 <- Plus
3L 3333745..3333925 265..445 100 <- Plus
3L 3333984..3334171 446..633 100 <- Plus
3L 3334227..3334516 634..923 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:18:12 Download gff for BS09596.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3333445..3333692 17..264 100 <- Plus
arm_3L 3333745..3333925 265..445 100 <- Plus
arm_3L 3333984..3334171 446..633 100 <- Plus
arm_3L 3334227..3334516 634..923 99   Plus

BS09596.5prime Sequence

792 bp (791 high quality bases) assembled on 2006-04-19

> BS09596.5prime
GAAGTTATCAGTCGACATGCGGAGTTACATTGCACTCTTGGGGCTTATCC
TAACTCTAAGTGGACAGTTTAACATGCTGCTGGCCGGGAAGAAACATTCC
TGCGAGAAATTGCTCGCCGATCTTGGCGATGCACAGAGCAAGTTCATCTA
CTGCGCCACCACAAAATCAGTGCCCGTGAATTTGTGTGAGGGCTGCGTCG
ATCTCTACCGCAATCTCACCAATGATTACGGAAACCTAATTGCGAACGCC
AACTGTTCCAAGCGTTATCTGAACTCGGACAGGATCAATATAGTGGCTAC
CACCCAAGGAATCCTAACTAGCCTGTGGCAAAAGGCCAACTGCGAAAATT
GCTTCAGGGATAATTTTTGGATTGTATACAGCGATAACTCAACAAAGTTG
CAAAATTGCTTAGAATCTGCTAGTTCGGATTTAGTTTGCTTCAAGTGCAA
AAATGATTACGTGAGTCTAAATGATTTCTACCTTAGCATGGAAAAGAAAG
TCGGTGGAAGTGTGTGCTTCGATCTGCAGGACAATATGAACCGGACTCGT
CTGAATTGGTCGAAAACGCTGAAATGCTGTCAACGCGAGGTGAAGCTGAC
CAATTTTCTCATCGCCGTTGGCGTAGTTGTCCTGCTGCCCATTTTCACCT
TCTATATTACGGCAGTTGTAGTGACCAAGCGGCGGGAGGCCAATCATGGC
TTGCTCAATGAGCAGGAACCTGAACTGGACGCGCCCTCCACGTCGACGCT
TATCACGGCTGCCGTGCTGTCCACTTCAACAGAGGATCCTGT

BS09596.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:31:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14969-PA 948 CG14969-RA 1..776 17..792 3880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14969-RA 1636 CG14969-RA 363..1138 17..792 3880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:26:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3334227..3334557 347..17 1655 100 Minus
3L 28110227 3L 3333984..3334171 535..348 940 100 Minus
3L 28110227 3L 3333745..3333925 716..536 905 100 Minus
3L 28110227 3L 3333617..3333693 792..716 385 100 Minus
Blast to na_te.dros performed on 2015-02-11 13:26:45 has no hits.

BS09596.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:14:49 Download gff for BS09596.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14969-PA 1..776 17..792 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:26:28 Download gff for BS09596.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14969-PA 1..776 17..792 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:34:48 Download gff for BS09596.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14969-RA 363..1138 17..792 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:57:53 Download gff for BS09596.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14969-RA 363..1138 17..792 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:57:53 Download gff for BS09596.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3333617..3333692 717..792 100 <- Minus
3L 3333745..3333925 536..716 100 <- Minus
3L 3333984..3334171 348..535 100 <- Minus
3L 3334227..3334557 17..347 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:34:48 Download gff for BS09596.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3333617..3333692 717..792 100 <- Minus
arm_3L 3333745..3333925 536..716 100 <- Minus
arm_3L 3333984..3334171 348..535 100 <- Minus
arm_3L 3334227..3334557 17..347 100   Minus

BS09596.complete Sequence

980 bp (980 high quality bases) assembled on 2006-02-16

GenBank Submission: FJ636449

> BS09596.complete
GAAGTTATCAGTCGACATGCGGAGTTACATTGCACTCTTGGGGCTTATCC
TAACTCTAAGTGGACAGTTTAACATGCTGCTGGCCGGGAAGAAACATTCC
TGCGAGAAATTGCTCGCCGATCTTGGCGATGCACAGAGCAAGTTCATCTA
CTGCGCCACCACAAAATCAGTGCCCGTGAATTTGTGTGAGGGCTGCGTCG
ATCTCTACCGCAATCTCACCAATGATTACGGAAACCTAATTGCGAACGCC
AACTGTTCCAAGCGTTATCTGAACTCGGACAGGATCAATATAGTGGCTAC
CACCCAAGGAATCCTAACTAGCCTGTGGCAAAAGGCCAACTGCGAAAATT
GCTTCAGGGATAATTTTTGGATTGTATACAGCGATAACTCAACAAAGTTG
CAAAATTGCTTAGAATCTGCTAGTTCGGATTTAGTTTGCTTCAAGTGCAA
AAATGATTACGTGAGTCTAAATGATTTCTACCTTAGCATGGAAAAGAAAG
TCGGTGGAAGTGTGTGCTTCGATCTGCAGGACAATATGAACCGGACTCGT
CTGAATTGGTCGAAAACGCTGAAATGCTGTCAACGCGAGGTGAAGCTGAC
CAATTTTCTCATCGCCGTTGGCGTAGTTGTCCTGCTGCCCATTTTCACCT
TCTATATTACGGCAGTTGTAGTGACCAAGCGGCGGGAGGCCAATCATGGC
TTGCTCAATGAGCAGGAACCTGAACTGGACGCGCCCTCCACGTCGACGCT
TATCACGGCTGCCGTGCTGTCCACTTCAACAGAGGATCCTGTTGCAATCT
CCGCCCGAACAGAAAAGATCGCCAATGTATTGATCGGTGCTGGAACACAC
CTGTTGGACGAGTCCAGTGATGAAGAACCTCCTAGGGGGAAAAAGGTTGC
TCACAGTCCCGCATCCGACTACTCCAGTGACGATGAGCCTCTTGAAAAGC
CCAAACGCGCGTAAAAGCTTTCTAGACCAT

BS09596.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14969-RA 948 CG14969-PA 1..948 17..964 4740 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:11:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14969-RA 1636 CG14969-RA 363..1310 17..964 4740 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:11:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3334227..3334557 347..17 1655 100 Minus
3L 28110227 3L 3333445..3333693 964..716 1245 100 Minus
3L 28110227 3L 3333984..3334171 535..348 940 100 Minus
3L 28110227 3L 3333745..3333925 716..536 905 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:11:26 has no hits.

BS09596.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:40:53 Download gff for BS09596.complete
Subject Subject Range Query Range Percent Splice Strand
CG14969-RA 1..948 17..964 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:27:09 Download gff for BS09596.complete
Subject Subject Range Query Range Percent Splice Strand
CG14969-RA 363..1310 17..964 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:41:40 Download gff for BS09596.complete
Subject Subject Range Query Range Percent Splice Strand
CG14969-RA 363..1308 17..962 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:40:54 Download gff for BS09596.complete
Subject Subject Range Query Range Percent Splice Strand
CG14969-RA 363..1310 17..964 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:47:00 Download gff for BS09596.complete
Subject Subject Range Query Range Percent Splice Strand
CG14969-RA 363..1308 17..962 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:47:00 Download gff for BS09596.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3333447..3333692 717..962 100 <- Minus
3L 3333745..3333925 536..716 100 <- Minus
3L 3333984..3334171 348..535 100 <- Minus
3L 3334227..3334557 17..347 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:41:40 Download gff for BS09596.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3333447..3333692 717..962 100 <- Minus
arm_3L 3333745..3333925 536..716 100 <- Minus
arm_3L 3333984..3334171 348..535 100 <- Minus
arm_3L 3334227..3334557 17..347 100   Minus

BS09596.pep Sequence

Translation from 16 to 963

> BS09596.pep
MRSYIALLGLILTLSGQFNMLLAGKKHSCEKLLADLGDAQSKFIYCATTK
SVPVNLCEGCVDLYRNLTNDYGNLIANANCSKRYLNSDRINIVATTQGIL
TSLWQKANCENCFRDNFWIVYSDNSTKLQNCLESASSDLVCFKCKNDYVS
LNDFYLSMEKKVGGSVCFDLQDNMNRTRLNWSKTLKCCQREVKLTNFLIA
VGVVVLLPIFTFYITAVVVTKRREANHGLLNEQEPELDAPSTSTLITAAV
LSTSTEDPVAISARTEKIANVLIGAGTHLLDESSDEEPPRGKKVAHSPAS
DYSSDDEPLEKPKRA*

BS09596.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:30:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14969-PA 315 CG14969-PA 1..315 1..315 1638 100 Plus