Clone BS09668 Report

Search the DGRC for BS09668

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:96
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG45071-RA
Protein status:BS09668.pep: full length peptide match
Sequenced Size:1322

Clone Sequence Records

BS09668.3prime Sequence

918 bp (787 high quality bases) assembled on 2006-04-19

> BS09668.3prime
ATGGTCTAGAAAGCTTCTACTTGGACTCCTCTAGATCTTCTTTGTAGAGT
TCCTTGAAGATGAGCTTTTGTATCTTGGTGCGTATGCGCAGCTTCTGGGC
TGCGGTCAGCTGCTTCATGTACGGATGTAGGCTGAGCAAGTAGTGGTAGT
CATCGTCCTCTGGTACGAGCGGAGTGTCCATTGTCGAGGAACCATTAAAA
TTGCTATCCTCGGAGAGACGCGGGCGCTTCAGCTTAAGGGCGGGTATCAG
TCCATTGGCGTAGGAGTGTTGAGTGAAGCTCAGGTGATCTCCGTTTCCTC
CTACAGCAGAGGTGGGTCCGAAATCCTCATTTCGGTCTTTGGCCGCAAGA
TGTGCTGCTGCCAGAGTGGCCAGCGGATGGTGTGCTTTGTTGTATAGAGG
CGGTGGCGACACAGATCTCTTGCCGCCCATTGGCGCTCCATTCGAGGATA
CAGATGACGCGGATGTGGTCGTTGCCGGCGCCAGAACAGCTGCTGAGCCC
GGTTGTTGTACTTGTGCGGATGTGGTGGTCACCATTGGCGGTGGAGAACA
GTGTGCGGCTGGTGGTTCCACTAGCACTTGTAGTGAGGGTGCCACTGGAG
ATGTCATTTGCTGTGGCGGAGGTGGCTTTCTGCTCAAGTCCTCCGCCTCC
TTTTCCAGCTCCATCAACTGAGCGCGGAGTAATCCTGCCTTAATTAAAGC
GTGCTGATGTGCCTCTTCTTGGGCTCGCAAAGCTCCGGTGGCCAGTGGTG
TGGTGCTAACTTGATTCATTTGATGCGCAGCCGGTGGCGTGGGCATCGTT
TCCTCCATGGTGGCTTCGCTAGCCTCTCCGTCCGCCTCCATTTCCTCCTC
GTCGTAATCCTCGTCGCTGTCCTGCAGACGACGTATTAGACCCGTTTGTT
AAATCCGGCTCCCCCACT

BS09668.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG6854-PA 1290 CG6854-RA 415..1290 892..17 4355 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 15:44:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG45071-RB 1717 CG45071-RB 616..1516 918..17 4455 99.7 Minus
CG45071-RA 1867 CG45071-RA 766..1666 918..17 4455 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 15:44:46
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15109629..15110529 918..17 4430 99.7 Minus
Blast to na_te.dros performed on 2015-01-31 15:44:50 has no hits.

BS09668.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:16:40 Download gff for BS09668.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6854-PA 390..1290 17..918 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:29:05 Download gff for BS09668.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6854-PA 390..1290 17..918 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:29:37 Download gff for BS09668.3prime
Subject Subject Range Query Range Percent Splice Strand
CTPsyn-RA 766..1666 17..918 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:44:47 Download gff for BS09668.3prime
Subject Subject Range Query Range Percent Splice Strand
CG45071-RA 766..1666 17..918 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:44:47 Download gff for BS09668.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 15109629..15110529 17..918 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:29:37 Download gff for BS09668.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15102729..15103629 17..918 99   Minus

BS09668.5prime Sequence

898 bp (875 high quality bases) assembled on 2006-04-19

> BS09668.5prime
GAAGTTATCAGTCGACATGGCGCCAAAAAAGTCCACCATTGTGCTCAATG
TGGAGCAGTTTATTCACGACATCGAGGAGCGCCCGGCCATCTGGAACCGC
AATTTCCACTGCAACAAGGCCTTCCTCGAGCAGATGTGGGACGAGCTGAG
CGGAGCGCACAAACTGCCAAAGATCGTTCTCAAGGCCAAATGGAAGGGAC
TTCGAGACAATTTCCGTGTGGAGTACAAAAGGATACCGCGGGCGGATAAC
GGTGATTTTATGGTGGATCCGGCCACCTTTGAGTCCAAGTGGCTGCACTA
CTATGCATTGTTGTTTTTAACTGATCACATGCGTCATCGTTTGCCAAAGA
ACGAACAGGATCAGTCATTTTACTTCAGCCAGCAAAGCGAGGACTGTGAA
AAGACAGTGGTGGAGCCGGATTTAACAAACGGTCTAATACGTCGTCTGCA
GGACAGCGACGAGGATTACGACGAGGAGGAAATGGAGGCGGACGGAGAGG
CTAGCGAAGCCACCATGGAGGAAACGATGCCCACGCCACCGGCTGCGCAT
CAAATGAATCAAGTTAGCACCACACCACTGGCCACCGGAGCTTTGCGAGC
CCAAGAAGAGGCACATCAGCACGCTTTAATTAAGGCAGGATTACTCCGCG
CTCAGTTGATGGAGCTGGAAAAGGAGGCGGAGGACTTGAGCAGAAAGCCA
CCTCCGCCACAGCAAATGACATCTCCAGTGGCACCCTCACTACAAGTGCT
AGTGGAACCACCAGCCGCACACTGTTCTCCACCGCCAATGGTGACCACCA
CATCCGCACAAGTACAACAACCGGGCTCAGCAGCTGTTCTGGCGCCGGCA
ACGACCACATCCGCGTCATCTGTATCCTCGAATGGAGCGCCAATGGGC

BS09668.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:32:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG6854-PA 1290 CG6854-RA 1..882 17..898 4410 100 Plus
CG6854-PB 1872 CG6854-RB 1..154 17..170 770 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:02:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG45071-RA 1867 CG45071-RA 377..1258 17..898 4410 100 Plus
CG45071-RB 1717 CG45071-RB 529..1108 319..898 2900 100 Plus
CG45071-RB 1717 CG45071-RB 377..530 17..170 770 100 Plus
CTPsyn-RB 2423 CG45070-RB 246..399 17..170 770 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:02:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15109537..15110121 314..898 2910 99.8 Plus
3L 28110227 3L 15108805..15108958 17..170 770 100 Plus
3L 28110227 3L 15109334..15109491 167..324 760 98.7 Plus
Blast to na_te.dros performed on 2015-02-12 11:02:56 has no hits.

BS09668.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:16:41 Download gff for BS09668.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6854-PA 1..882 17..898 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:29:08 Download gff for BS09668.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6854-PA 1..882 17..898 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:27:46 Download gff for BS09668.5prime
Subject Subject Range Query Range Percent Splice Strand
CTPsyn-RA 377..1258 17..898 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:15:48 Download gff for BS09668.5prime
Subject Subject Range Query Range Percent Splice Strand
CG45071-RA 377..1258 17..898 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:15:48 Download gff for BS09668.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15109338..15109487 171..320 100 -> Plus
3L 15108805..15108958 17..170 100 -> Plus
3L 15109544..15110121 321..898 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:27:46 Download gff for BS09668.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15101905..15102058 17..170 100 -> Plus
arm_3L 15102438..15102587 171..320 100 -> Plus
arm_3L 15102644..15103221 321..898 100   Plus

BS09668.complete Sequence

1322 bp assembled on 2008-08-15

GenBank Submission: KX805312

> BS09668.complete
GAAGTTATCAGTCGACATGGCGCCAAAAAAGTCCACCATTGTGCTCAATG
TGGAGCAGTTTATTCACGACATCGAGGAGCGCCCGGCCATCTGGAACCGC
AATTTCCACTGCAACAAGGCCTTCCTCGAGCAGATGTGGGACGAGCTGAG
CGGAGCGCACAAACTGCCAAAGATCGTTCTCAAGGCCAAATGGAAGGGAC
TTCGAGACAATTTCCGTGTGGAGTACAAAAGGATACCGCGGGCGGATAAC
GGTGATTTTATGGTGGATCCGGCCACCTTTGAGTCCAAGTGGCTGCACTA
CTATGCATTGTTGTTTTTAACTGATCACATGCGTCATCGTTTGCCAAAGA
ACGAACAGGATCAGTCATTTTACTTCAGCCAGCAAAGCGAGGACTGTGAA
AAGACAGTGGTGGAGCCGGATTTAACAAACGGTCTAATACGTCGTCTGCA
GGACAGCGACGAGGATTACGACGAGGAGGAAATGGAGGCGGACGGAGAGG
CTAGCGAAGCCACCATGGAGGAAACGATGCCCACGCCACCGGCTGCGCAT
CAAATGAATCAAGTTAGCACCACACCACTGGCCACCGGAGCTTTGCGAGC
CCAAGAAGAGGCACATCAGCACGCTTTAATTAAGGCAGGATTACTCCGCG
CTCAGTTGATGGAGCTGGAAAAGGAGGCGGAGGACTTGAGCAGAAAGCCA
CCTCCGCCACAGCAAATGACATCTCCAGTGGCACCCTCACTACAAGTGCT
AGTGGAACCACCAGCCGCACACTGTTCTCCACCGCCAATGGTGACCACCA
CATCCGCACAAGTACAACAACCGGGCTCAGCAGCTGTTCTGGCGCCGGCA
ACGACCACATCCGCGTCATCTGTATCCTCGAATGGAGCGCCAATGGGCGG
CAAGAGATCTGTGTCGCCACCGCCTCTATACAACAAAGCACACCATCCGC
TGGCCACTCTGGCAGCAGCACATCTTGCGGCCAAAGACCGAAATGAGGAT
TTCGGACCCACCTCTGCTGTAGGAGGAAACGGAGATCACCTGAGCTTCAC
TCAACACTCCTACGCCAATGGACTGATACCCGCCCTTAAGCTGAAGCGCC
CGCGTCTCTCCGAGGATAGCAATTTTAATGGTTCCTCGACAATGGACACT
CCGCTCGTACCAGAGGACGATGACTACCACTACTTGCTCAGCCTACATCC
GTACATGAAGCAGCTGACCGCAGCCCAGAAGCTGCGCATACGCACCAAGA
TACAAAAGCTCATCTTCAAGGAACTCTACAAAGAAGATCTAGAGGAGTCC
AAGTAGAAGCTTTCTAGACCAT

BS09668.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:42:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG45071-RA 1290 CG45071-PA 1..1290 17..1306 6435 99.9 Plus
CG45071-RB 1140 CG45071-PB 153..1140 319..1306 4925 99.9 Plus
CG45071-RB 1140 CG45071-PB 1..154 17..170 770 100 Plus
CTPsyn-RB 1872 CG45070-PB 1..154 17..170 770 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:42:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG45071-RA 1867 CG45071-RA 377..1666 17..1306 6435 99.9 Plus
CG45071-RB 1717 CG45071-RB 529..1516 319..1306 4925 99.9 Plus
CG45071-RB 1717 CG45071-RB 377..530 17..170 770 100 Plus
CTPsyn-RB 2423 CG45070-RB 246..399 17..170 770 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:42:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15109537..15110529 314..1306 4935 99.8 Plus
3L 28110227 3L 15108805..15108958 17..170 770 100 Plus
3L 28110227 3L 15109334..15109491 167..324 760 98.7 Plus
Blast to na_te.dros performed on 2014-11-27 23:42:21 has no hits.

BS09668.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:54:11 Download gff for BS09668.complete
Subject Subject Range Query Range Percent Splice Strand
CG6854-RA 375..1664 17..1306 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:35:54 Download gff for BS09668.complete
Subject Subject Range Query Range Percent Splice Strand
CTPsyn-RA 377..1666 17..1306 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:08:17 Download gff for BS09668.complete
Subject Subject Range Query Range Percent Splice Strand
CG6854-RA 375..1664 17..1306 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:06:33 Download gff for BS09668.complete
Subject Subject Range Query Range Percent Splice Strand
CG45071-RA 377..1666 17..1306 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:06:33 Download gff for BS09668.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15108805..15108958 17..170 100 -> Plus
3L 15109338..15109487 171..320 100 -> Plus
3L 15109544..15110529 321..1306 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:35:54 Download gff for BS09668.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15101905..15102058 17..170 100 -> Plus
arm_3L 15102438..15102587 171..320 100 -> Plus
arm_3L 15102644..15103629 321..1306 99   Plus

BS09668.pep Sequence

Translation from 16 to 1305

> BS09668.pep
MAPKKSTIVLNVEQFIHDIEERPAIWNRNFHCNKAFLEQMWDELSGAHKL
PKIVLKAKWKGLRDNFRVEYKRIPRADNGDFMVDPATFESKWLHYYALLF
LTDHMRHRLPKNEQDQSFYFSQQSEDCEKTVVEPDLTNGLIRRLQDSDED
YDEEEMEADGEASEATMEETMPTPPAAHQMNQVSTTPLATGALRAQEEAH
QHALIKAGLLRAQLMELEKEAEDLSRKPPPPQQMTSPVAPSLQVLVEPPA
AHCSPPPMVTTTSAQVQQPGSAAVLAPATTTSASSVSSNGAPMGGKRSVS
PPPLYNKAHHPLATLAAAHLAAKDRNEDFGPTSAVGGNGDHLSFTQHSYA
NGLIPALKLKRPRLSEDSNFNGSSTMDTPLVPEDDDYHYLLSLHPYMKQL
TAAQKLRIRTKIQKLIFKELYKEDLEESK*

BS09668.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:33:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG45071-PA 429 CG45071-PA 1..429 1..429 2248 100 Plus
CG45071-PB 379 CG45071-PB 1..379 1..429 1822 85.1 Plus
CTPsyn-PB 623 CG45070-PB 1..54 1..54 281 96.3 Plus