Clone Sequence Records
BS09693.3prime Sequence
909 bp (825 high quality bases) assembled on 2006-04-19
> BS09693.3prime
ATGGTCTAGAATGCTTTTACTCGAACGGCGTGCTGAACATATTGATATTC
AGATCCTCAAACGTGGTCGGCGTGTGATCCAACATCTGCAGCATATCTGA
GAACTCCTGACCCTGTGGCTGTCCTGCTCCTGCTGGTCCACCGGGATGAG
CGTGCGGATGGTGCGGATGCGCCGTTGGGTGCGGCGGATGCGGGTGTCCT
CCAGCCTGCTGCCAGTCCCACATTCCCGGCGCATTGGGTGGCGGTGGTGG
TCCCGCCTGATATGCTCCTGGCTGCGCTTGCTGGCGATTTCCGTTTCCGG
CACTCAATTGTGTATAGGTTGGACCGCTCGGCGACCTGGCCGGACTCGTC
TGCTGATACTGATAGCCTTCGGTCACGGGCTGCTGCTGCTGTTGTTGCTG
CTGGGGACGCAGTGCTGCCCAGGAGTTGGGTGCCACCGGCGTGGGTGAGG
TGCCAGACTTGGGTATCTTAGCCAACGGTGATGGTCCGCCAGCACTGTAC
GGCGAGTGTGTGGTGTCGTAGGTATATCCGACTGGTGTGGTTTGCGCCGA
TCCTGGCCGTTGCTGTTGTTGCTGCTGCTGTTGGGGCGTAGGAGCCTGCA
TGGCCAGCATGTGCGTCTGGTACATGCCATCATTCGTGGCGCTGCCCACT
GGAGTTAACTCGCGGCGCGCATAGTCCACTCCTGGGGCAGCCTGAACATA
AACGTGTTGCTCCTGCTGCTGTTGTTGTTGCACTTGCTCGGGCGTATGAG
CAGCCGCCGCATCCAGGGGAGCACCGTGCATGGTCTTCCCAGAACTGTTG
GTGCACACTATATATTCCACTTCGTCGGTATATGGATTCAGAAAGGCATA
GGCCTGTGTGCGGAGCCAAACGTACTCCGAATTCTTAGCTCTGGCTCTGT
ACAAAGCGA
BS09693.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:33:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11987-PA | 1929 | tgo-RA | 1041..1929 | 905..17 | 4445 | 100 | Minus |
| CG2161-PB | 1740 | Rga-RB | 184..210 | 403..377 | 135 | 100 | Minus |
| CG2161-PA | 1758 | Rga-RA | 184..210 | 403..377 | 135 | 100 | Minus |
| CG7199-PA | 1800 | Hr78-RA | 635..661 | 585..559 | 135 | 100 | Minus |
| CG7199-PC | 1806 | Hr78-RC | 641..667 | 585..559 | 135 | 100 | Minus |
| CG7199-PD | 1806 | Hr78-RD | 641..667 | 585..559 | 135 | 100 | Minus |
| CG7199-PB | 1806 | Hr78-RB | 641..667 | 585..559 | 135 | 100 | Minus |
| CG1133-PA | 1830 | opa-RA | 128..154 | 585..559 | 135 | 100 | Minus |
| CG10543-PB | 2670 | CG10543-RB | 1336..1362 | 403..377 | 135 | 100 | Minus |
| CG10543-PC | 3075 | CG10543-RC | 1741..1767 | 403..377 | 135 | 100 | Minus |
| CG10543-PA | 4905 | CG10543-RA | 3571..3597 | 403..377 | 135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:36:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgo-RB | 2634 | CG11987-RB | 1239..2127 | 905..17 | 4445 | 100 | Minus |
| tgo-RA | 3108 | CG11987-RA | 1239..2127 | 905..17 | 4445 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:36:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9017754..9018642 | 17..905 | 4445 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 19:36:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2240..2722 | 813..312 | 200 | 55.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6965 | 587..332 | 159 | 56.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2634..2939 | 583..269 | 157 | 53.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2277..2674 | 788..378 | 155 | 55.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6823..6905 | 587..506 | 142 | 66.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2402..2876 | 587..107 | 139 | 54.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2324..2386 | 413..351 | 135 | 72.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2343..2392 | 583..533 | 135 | 76.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2587..2802 | 597..382 | 134 | 53.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2653..2845 | 738..543 | 133 | 56.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6748..6802 | 587..532 | 133 | 73.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1506..1563 | 434..379 | 131 | 74.1 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1112..1162 | 583..532 | 131 | 75 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2360..2431 | 587..514 | 130 | 67.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6928 | 738..532 | 129 | 57.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6833..6891 | 403..351 | 128 | 74.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2348..2404 | 587..533 | 127 | 71.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6769..6825 | 587..533 | 127 | 71.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6745..6847 | 451..350 | 124 | 64.2 | Minus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7939..8044 | 602..497 | 124 | 61.1 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 131..190 | 428..367 | 124 | 71 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9161..9220 | 428..367 | 124 | 71 | Minus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9383..9488 | 602..497 | 124 | 61.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1554..1601 | 583..536 | 123 | 72.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2315..2511 | 587..379 | 123 | 57.3 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1075..1132 | 587..532 | 123 | 70.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6790..6850 | 587..532 | 122 | 72.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6835..6862 | 731..704 | 122 | 92.9 | Minus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 6588..6624 | 592..556 | 122 | 81.1 | Minus |
| TART-C | 11124 | TART-C TARTC 11124bp | 8044..8080 | 592..556 | 122 | 81.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2373..2416 | 748..705 | 121 | 75 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6746 | 404..379 | 121 | 96.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2367..2431 | 598..533 | 120 | 66.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1560..1584 | 403..379 | 116 | 96 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2421 | 417..379 | 116 | 80 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1071..1122 | 402..351 | 116 | 74.1 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1143 | 738..705 | 116 | 82.4 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1115..1139 | 403..379 | 116 | 96 | Minus |
| Doc3-element | 4740 | Doc3-element DOC3 4740bp | 535..568 | 738..705 | 116 | 82.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6754..6814 | 413..350 | 114 | 68.8 | Minus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7407..7451 | 423..380 | 114 | 75.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2786..2988 | 587..379 | 113 | 54.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6775..6838 | 413..350 | 113 | 64.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2345..2379 | 413..379 | 112 | 80 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6767 | 413..379 | 112 | 80 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2748..2841 | 800..703 | 110 | 61.2 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1046..1100 | 603..546 | 110 | 72.4 | Minus |
| TART-A | 13424 | TART-A 13424bp | 885..942 | 764..707 | 110 | 65.5 | Minus |
| TART-A | 13424 | TART-A 13424bp | 12063..12120 | 764..707 | 110 | 65.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2363 | 403..350 | 109 | 72.2 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1129..1157 | 587..559 | 109 | 86.2 | Minus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 967..1029 | 591..532 | 109 | 68.3 | Minus |
BS09693.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:17:22 Download gff for
BS09693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgo-PA | 1037..1929 | 17..908 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:30:06 Download gff for
BS09693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11987-PA | 1037..1929 | 17..908 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:19:23 Download gff for
BS09693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgo-RA | 1235..2127 | 17..908 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:56:18 Download gff for
BS09693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgo-RA | 1235..2127 | 17..908 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 23:56:18 Download gff for
BS09693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9017754..9018646 | 17..908 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:19:23 Download gff for
BS09693.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4843476..4844368 | 17..908 | 99 | | Plus |
BS09693.5prime Sequence
925 bp (890 high quality bases) assembled on 2006-04-19
> BS09693.5prime
GAAGTTATCAGTCGACATGGACGAGGCGAACATACAGGACAAGGAGCGGT
TCGCCAGCCGCGAGAACCATTGCGAGATTGAACGACGTCGCCGCAACAAG
ATGACGGCCTACATCACGGAACTCTCGGACATGGTGCCCACCTGCAGTGC
CCTGGCCCGCAAACCGGACAAGCTCACCATTCTCCGCATGGCAGTGGCTC
ACATGAAGGCACTGCGTGGCACAGGAAATACCAGCAGCGATGGCACTTAC
AAGCCCTCCTTCCTGACCGACCAGGAGCTTAAGCATCTTATCCTGGAGGC
GGCCGATGGTTTCCTGTTCGTGGTATCCTGCGACTCGGGCAGGGTGATCT
ATGTATCGGATTCGGTGACTCCCGTGCTGAACTACACCCAAAGCGATTGG
TATGGCACTAGCCTGTATGAGCACATTCATCCCGATGATCGCGAGAAGAT
CCGCGAGCAATTATCAACCCAGGAATCGCAGAATGCCGGCCGCATCCTGG
ATCTAAAGTCGGGAACTGTGAAAAAGGAGGGTCACCAGTCCAGCATGCGT
TTGAGCATGGGTGCTCGTCGTGGTTTCATCTGTCGCATGCGGGTGGGCAA
TGTAAACCCGGAGTCCATGGTCTCGGGGCACTTGAATCGTCTCAAGCAAC
GAAACTCCCTCGGACCTTCAAGGGATGGCACCAACTACGCCGTGGTTCAC
TGCACGGGTTATATCAAAAACTGGCCGCCCACCGATATGTTCCCCAACAT
GCACATGGAGCGCGATGTGGACGACATGAGCTCGCACTGCTGCCTGGTGG
CCATCGGCCGTCTGCAGGTCACCTCCACGGCAGCCAACGATATGAGTGGA
TCGAACAATCAGAGTGAGTTCATCACACGTCATGCGATGGATGGCAAGTT
CACGTTTGTGGATCAGCGTGTCCTT
BS09693.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:33:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11987-PA | 1929 | tgo-RA | 1..909 | 17..925 | 4545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:18:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgo-RB | 2634 | CG11987-RB | 198..1107 | 16..925 | 4550 | 100 | Plus |
| tgo-RA | 3108 | CG11987-RA | 198..1107 | 16..925 | 4550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:18:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9018774..9019683 | 925..16 | 4550 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 06:18:47 has no hits.
BS09693.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:17:23 Download gff for
BS09693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgo-PA | 1..909 | 17..925 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:30:07 Download gff for
BS09693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11987-PA | 1..909 | 17..925 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 13:35:13 Download gff for
BS09693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgo-RA | 189..1107 | 9..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:06:57 Download gff for
BS09693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgo-RA | 189..1107 | 9..925 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:06:57 Download gff for
BS09693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9018774..9019687 | 9..925 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 13:35:13 Download gff for
BS09693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4844496..4845409 | 9..925 | 99 | | Minus |
BS09693.complete Sequence
1961 bp assembled on 2008-08-15
GenBank Submission: KX801946
> BS09693.complete
GAAGTTATCAGTCGACATGGACGAGGCGAACATACAGGACAAGGAGCGGT
TCGCCAGCCGCGAGAACCATTGCGAGATTGAACGACGTCGCCGCAACAAG
ATGACGGCCTACATCACGGAACTCTCGGACATGGTGCCCACCTGCAGTGC
CCTGGCCCGCAAACCGGACAAGCTCACCATTCTCCGCATGGCAGTGGCTC
ACATGAAGGCACTGCGTGGCACAGGAAATACCAGCAGCGATGGCACTTAC
AAGCCCTCCTTCCTGACCGACCAGGAGCTTAAGCATCTTATCCTGGAGGC
GGCCGATGGTTTCCTGTTCGTGGTATCCTGCGACTCGGGCAGGGTGATCT
ATGTATCGGATTCGGTGACTCCCGTGCTGAACTACACCCAAAGCGATTGG
TATGGCACTAGCCTGTATGAGCACATTCATCCCGATGATCGCGAGAAGAT
CCGCGAGCAATTATCAACCCAGGAATCGCAGAATGCCGGCCGCATCCTGG
ATCTAAAGTCGGGAACTGTGAAAAAGGAGGGTCACCAGTCCAGCATGCGT
TTGAGCATGGGTGCTCGTCGTGGTTTCATCTGTCGCATGCGGGTGGGCAA
TGTAAACCCGGAGTCCATGGTCTCGGGGCACTTGAATCGTCTCAAGCAAC
GAAACTCCCTCGGACCTTCAAGGGATGGCACCAACTACGCCGTGGTTCAC
TGCACGGGTTATATCAAAAACTGGCCGCCCACCGATATGTTCCCCAACAT
GCACATGGAGCGCGATGTGGACGACATGAGCTCGCACTGCTGCCTGGTGG
CCATCGGCCGTCTGCAGGTCACCTCCACGGCAGCCAACGATATGAGTGGA
TCGAACAATCAGAGTGAGTTCATCACACGTCATGCGATGGATGGCAAGTT
CACGTTTGTGGATCAGCGTGTCCTTAACATATTGGGATATACTCCTACTG
AGCTGCTGGGGAAGATCTGCTACGATTTCTTTCATCCCGAGGACCAGAGC
CACATGAAGGAGAGCTTTGACCAGGTGCTCAAGCAAAAGGGACAGATGTT
CTCGCTTTTGTACAGAGCCAGAGCTAAGAATTCGGAGTACGTTTGGCTCC
GCACACAGGCCTATGCCTTTCTGAATCCATATACCGACGAAGTGGAATAT
ATAGTGTGCACCAACAGTTCTGGGAAGACCATGCACGGTGCTCCCCTGGA
TGCGGCGGCTGCTCATACGCCCGAGCAAGTGCAACAACAACAGCAGCAGG
AGCAACACGTTTATGTTCAGGCTGCCCCAGGAGTGGACTATGCGCGCCGC
GAGTTAACTCCAGTGGGCAGCGCCACGAATGATGGCATGTACCAGACGCA
CATGCTGGCCATGCAGGCTCCTACGCCCCAACAGCAGCAGCAACAACAGC
AACGGCCAGGATCGGCGCAAACCACACCAGTCGGATATACCTACGACACC
ACACACTCGCCGTACAGTGCTGGCGGACCATCACCGTTGGCTAAGATACC
CAAGTCTGGCACCTCACCCACGCCGGTGGCACCCAACTCCTGGGCAGCAC
TGCGTCCCCAGCAGCAACAACAGCAGCAGCAGCCCGTGACCGAAGGCTAT
CAGTATCAGCAGACGAGTCCGGCCAGGTCGCCGAGCGGTCCAACCTATAC
ACAATTGAGTGCCGGAAACGGAAATCGCCAGCAAGCGCAGCCAGGAGCAT
ATCAGGCGGGACCACCACCGCCACCCAATGCGCCGGGAATGTGGGACTGG
CAGCAGGCTGGAGGACACCCGCATCCGCCGCACCCAACGGCGCATCCGCA
CCATCCGCACGCTCATCCCGGTGGACCAGCAGGAGCAGGACAGCCACAGG
GTCAGGAGTTCTCAGATATGCTGCAGATGTTGGATCACACGCCGACCACG
TTTGAGGATCTGAATATCAATATGTTCAGCACGCCGTTCGAGTAAAAGCA
TTCTAGACCAT
BS09693.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:05:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgo-RB | 1929 | CG11987-PB | 1..1929 | 17..1945 | 9645 | 100 | Plus |
| tgo-RA | 1929 | CG11987-PA | 1..1929 | 17..1945 | 9645 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:05:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgo-RB | 2634 | CG11987-RB | 198..2127 | 16..1945 | 9650 | 100 | Plus |
| tgo-RA | 3108 | CG11987-RA | 198..2127 | 16..1945 | 9650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:05:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9017754..9019683 | 1945..16 | 9650 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 11:05:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2240..2722 | 1149..1650 | 200 | 55.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6965 | 1375..1630 | 159 | 56.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2634..2939 | 1379..1693 | 157 | 53.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2277..2674 | 1174..1584 | 155 | 55.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6823..6905 | 1375..1456 | 142 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2402..2876 | 1375..1855 | 139 | 54.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2324..2386 | 1549..1611 | 135 | 72.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2343..2392 | 1379..1429 | 135 | 76.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2653..2845 | 1224..1419 | 133 | 56.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6748..6802 | 1375..1430 | 133 | 73.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1506..1563 | 1528..1583 | 131 | 74.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1112..1162 | 1379..1430 | 131 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2360..2431 | 1375..1448 | 130 | 67.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6833..6891 | 1559..1611 | 128 | 74.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2348..2404 | 1375..1429 | 127 | 71.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6769..6825 | 1375..1429 | 127 | 71.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6745..6847 | 1511..1612 | 124 | 64.2 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7939..8044 | 1360..1465 | 124 | 61.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 131..190 | 1534..1595 | 124 | 71 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9161..9220 | 1534..1595 | 124 | 71 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9383..9488 | 1360..1465 | 124 | 61.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1554..1601 | 1379..1426 | 123 | 72.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2315..2511 | 1375..1583 | 123 | 57.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1075..1132 | 1375..1430 | 123 | 70.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6790..6850 | 1375..1430 | 122 | 72.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6835..6862 | 1231..1258 | 122 | 92.9 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 6588..6624 | 1370..1406 | 122 | 81.1 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 8044..8080 | 1370..1406 | 122 | 81.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2373..2416 | 1214..1257 | 121 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6746 | 1558..1583 | 121 | 96.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1560..1584 | 1559..1583 | 116 | 96 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2421 | 1545..1583 | 116 | 80 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1115..1139 | 1559..1583 | 116 | 96 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1071..1122 | 1560..1611 | 116 | 74.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1143 | 1224..1257 | 116 | 82.4 | Plus |
| Doc3-element | 4740 | Doc3-element DOC3 4740bp | 535..568 | 1224..1257 | 116 | 82.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6754..6814 | 1549..1612 | 114 | 68.8 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7407..7451 | 1539..1582 | 114 | 75.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6775..6838 | 1549..1612 | 113 | 64.1 | Plus |
BS09693.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:52:48 Download gff for
BS09693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgo-RA | 184..2122 | 9..1945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:17:44 Download gff for
BS09693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgo-RA | 199..2125 | 17..1943 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:10:01 Download gff for
BS09693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgo-RA | 194..2120 | 17..1943 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:38:40 Download gff for
BS09693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgo-RA | 199..2125 | 17..1943 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:38:40 Download gff for
BS09693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9017756..9019682 | 17..1943 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:17:44 Download gff for
BS09693.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4843478..4845404 | 17..1943 | 100 | | Minus |
BS09693.pep Sequence
Translation from 16 to 1944
> BS09693.pep
MDEANIQDKERFASRENHCEIERRRRNKMTAYITELSDMVPTCSALARKP
DKLTILRMAVAHMKALRGTGNTSSDGTYKPSFLTDQELKHLILEAADGFL
FVVSCDSGRVIYVSDSVTPVLNYTQSDWYGTSLYEHIHPDDREKIREQLS
TQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRGFICRMRVGNVNPES
MVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGYIKNWPPTDMFPNMHMERD
VDDMSSHCCLVAIGRLQVTSTAANDMSGSNNQSEFITRHAMDGKFTFVDQ
RVLNILGYTPTELLGKICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYR
ARAKNSEYVWLRTQAYAFLNPYTDEVEYIVCTNSSGKTMHGAPLDAAAAH
TPEQVQQQQQQEQHVYVQAAPGVDYARRELTPVGSATNDGMYQTHMLAMQ
APTPQQQQQQQQRPGSAQTTPVGYTYDTTHSPYSAGGPSPLAKIPKSGTS
PTPVAPNSWAALRPQQQQQQQQPVTEGYQYQQTSPARSPSGPTYTQLSAG
NGNRQQAQPGAYQAGPPPPPNAPGMWDWQQAGGHPHPPHPTAHPHHPHAH
PGGPAGAGQPQGQEFSDMLQMLDHTPTTFEDLNINMFSTPFE*
BS09693.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:34:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgo-PB | 642 | CG11987-PB | 1..642 | 1..642 | 3454 | 100 | Plus |
| tgo-PA | 642 | CG11987-PA | 1..642 | 1..642 | 3454 | 100 | Plus |
| cyc-PA | 413 | CG8727-PA | 24..410 | 4..384 | 765 | 42.3 | Plus |
| sim-PC | 675 | CG7771-PC | 1..570 | 1..574 | 297 | 24.3 | Plus |
| sim-PA | 688 | CG7771-PA | 24..583 | 13..574 | 294 | 24.1 | Plus |
