Clone BS09782 Report

Search the DGRC for BS09782

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:97
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG14657-RB
Protein status:BS09782.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS09782.3prime Sequence

937 bp (877 high quality bases) assembled on 2006-04-19

> BS09782.3prime
ATGGTCTAGAAAGCTTTTAGGTGCTTGCGGAGATCTGCTGACGAGCCCGC
TGACGTGTCATTGGCGGGGAAGGACGCGCAGACAAGGCTGCGGAACCACG
ACTGCGCTTGGCGACTTTTTCATTAGCAGCAATGCGCTTGGTTGCGGCTT
TTCTAATTGAATCTGCTGAAGTGGTGGATGTCGCTGTGAGAACAGTGTCA
TTCTGCACAGAGGCTACACGACTACGTTTTGCAGCTTCACTTCTAGAGGT
TGATTTGCGCTTGGTCGGAGCTTTTATTGCTACTGGAGATTTGATTGGTT
CCGCTGGCGTAGGAGCCGTAATCGATTCTCCTCGACTGCGCTTGGATCCT
CCGCGTGCTGCCGTCGCTTTGCGCACGGCAGGAGCTTTGTCTTCAGTTCC
AGCATCTGCTGAAGTTGTTAATTCCGTATCCAGGGCCTTGCGTCGTCTTT
TGGCCGTGAGCATGGGAGCGCGACGACGACGCTTTGGCTTGGTTATGGCC
TGGGCAGAGCCTGAGGTGTGTGTGTTGAGAGAGCGGGATCTGCTCCCGCT
GTTAGTGGTGGTGGTTGCGTTAATGGCGGTGTTGGTGGTTTCTATATAGG
GCATCGGAACGAAGGCCGAGTCCGAAATTGTTGGCAATGTCAAGTTGCTG
GGCTTTGGCTTGCGGACCGTCCCATCTTCGTCGTTGTCCTCATCATCTTC
GCTGTCTGGATTTCCAGCGGGGACAAATTTTGGTTTCTTCACTTCAAATC
CGCGGAACTTGTGGATTTTTATTGGCGTTATGGGCATGGGCCGAATGGGC
TTAAAGAGGCACAGGTCCATAAGCAGGCTGTCGGTGCTGGGATTCCGTTT
GCGAGCGGCGGCAGATCGATGGAGTGCCGTGGGAGCCACAGTGTAGGTGC
GCAGAAAGGCGGCTGTTGGCACTTGACTGGGCAAGGA

BS09782.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:34:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-PB 1335 CG14657-RB 418..1335 934..17 4590 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 15:25:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-RC 2975 CG14657-RC 931..1848 934..17 4590 100 Minus
CG14657-RB 2414 CG14657-RB 931..1848 934..17 4590 100 Minus
CG14657-RD 2888 CG14657-RD 1309..2056 764..17 3740 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 15:24:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4819107..4819739 17..649 3165 100 Plus
3R 32079331 3R 4820333..4820502 765..934 850 100 Plus
3R 32079331 3R 4819794..4819910 648..764 585 100 Plus
Blast to na_te.dros performed on 2015-02-03 15:24:55 has no hits.

BS09782.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:19:47 Download gff for BS09782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-PB 415..1335 17..936 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:33:15 Download gff for BS09782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-PB 415..1335 17..936 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:18:51 Download gff for BS09782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 928..1848 17..936 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 18:46:40 Download gff for BS09782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 928..1848 17..936 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 18:46:40 Download gff for BS09782.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 4819794..4819910 648..764 100 <- Plus
3R 4820333..4820504 765..936 99   Plus
3R 4819107..4819737 17..647 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:18:51 Download gff for BS09782.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 644829..645459 17..647 100 <- Plus
arm_3R 645516..645632 648..764 100 <- Plus
arm_3R 646055..646226 765..936 99   Plus

BS09782.5prime Sequence

959 bp (852 high quality bases) assembled on 2006-04-19

> BS09782.5prime
GAAGTTATCAGTCGACATGCTGCTGGCCGCAGCCGGTCCACCGGCTTACG
ACGCCGGAAAACTGTCCAACAATGCCGGATCCGGATCCAGCAACGTGGGC
TCCGGCGGAGTGGGTACGCCCACGGCGTCCTCGTCGCGTCCTAGTGCCGC
TAGTGCCCTGATGAAGACCCTGTCTGTGCGCCTGCATCGAGGCACCGAGT
TCATTAAGGACACCGTTCATAAGGCCCTGGTCATGTCCGCTCCAACGCCT
GTGGCCCCAGCTACAGCTCCTGCGCCCAAGATCGTGGACCACAGCCTAAA
GCGAAAACTAAGCGGCGCTGGCGGGCTGATGGGCTGCAGCAGCATTGGCA
GCATGACCTCATCTATCGCCGGCAGCTCGAGAAGTCACCACTATGCACTG
ACTAGCCAGGTGGCCTCGTCACAGGTGATTCCTTTGCCCAGTCAAGTGCC
AACAGCCGCCTTTCTGCGCACCTACACTGTGGCTCCCACGGCACTCCATC
GATCTGCCGCCGCTCGCAAACGGAATCCCAGCACCGACAGCCTGCTTATG
GACCTGTGCCTCTTTAAGCCCATTCGGCCCATGCCCATAACGCCAATAAA
AATCCACAAGTTCCGCGGATTTGAAGTGAAGAAACCAAAATTTGTCCCCG
CTGGAAATCCAGACAGCGAAGATGATGAGGACAACGACGAAGATGGGACG
GTCCGCAAGCCAAAGCCCAGCAACTTGACATTGCCAACAATTTCGGACTC
GGCCTTCGTTCCGATGCCCTATATAGAAACCACCAACACCGCCATTAACG
CAACCACCACCACTAACAGCGGGAGCAGATCCCGCTCTCTCAACACACAC
ACCTCAGGCTCTGCCCAGGCCATAACCAAGCCAAAGCGTCGTCGTCGCGC
TCCCATGCTCACGGCCAAAAGACGACGCAAGGCCCTGGATACGGAATTAA
CAACTTCAG

BS09782.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:34:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-PB 1335 CG14657-RB 1..943 17..959 4715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:00:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-RC 2975 CG14657-RC 514..1456 17..959 4715 100 Plus
CG14657-RB 2414 CG14657-RB 514..1456 17..959 4715 100 Plus
CG14657-RD 2888 CG14657-RD 514..1101 17..604 2940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4820333..4820919 603..17 2935 100 Minus
3R 32079331 3R 4819499..4819739 959..719 1205 100 Minus
3R 32079331 3R 4819794..4819910 720..604 585 100 Minus
Blast to na_te.dros performed on 2015-02-11 12:00:46 has no hits.

BS09782.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:19:48 Download gff for BS09782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-PB 1..943 17..959 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:33:17 Download gff for BS09782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-PB 1..943 17..959 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 16:23:43 Download gff for BS09782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 508..1456 8..959 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:33:33 Download gff for BS09782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 508..1456 8..959 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:33:33 Download gff for BS09782.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4819499..4819737 721..959 100 <- Minus
3R 4819794..4819910 604..720 100 <- Minus
3R 4820333..4820925 8..603 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 16:23:43 Download gff for BS09782.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 645221..645459 721..959 100 <- Minus
arm_3R 645516..645632 604..720 100 <- Minus
arm_3R 646055..646647 8..603 99   Minus

BS09782.complete Sequence

1367 bp (1367 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ636479

> BS09782.complete
GAAGTTATCAGTCGACATGCTGCTGGCCGCAGCCGGTCCACCGGCTTACG
ACGCCGGAAAACTGTCCAACAATGCCGGATCCGGATCCAGCAACGTGGGC
TCCGGCGGAGTGGGTACGCCCACGGCGTCCTCGTCGCGTCCTAGTGCCGC
TAGTGCCCTGATGAAGACCCTGTCTGTGCGCCTGCATCGAGGCACCGAGT
TCATTAAGGACACCGTTCATAAGGCCCTGGTCATGTCCGCTCCAACGCCT
GTGGCCCCAGCTACAGCTCCTGCGCCCAAGATCGTGGACCACAGCCTAAA
GCGAAAACTAAGCGGCGCTGGCGGGCTGATGGGCTGCAGCAGCATTGGCA
GCATGACCTCATCTATCGCCGGCAGCTCGAGAAGTCACCACTATGCACTG
ACTAGCCAGGTGGCCTCGTCACAGGTGATTCCTTTGCCCAGTCAAGTGCC
AACAGCCGCCTTTCTGCGCACCTACACTGTGGCTCCCACGGCACTCCATC
GATCTGCCGCCGCTCGCAAACGGAATCCCAGCACCGACAGCCTGCTTATG
GACCTGTGCCTCTTTAAGCCCATTCGGCCCATGCCCATAACGCCAATAAA
AATCCACAAGTTCCGCGGATTTGAAGTGAAGAAACCAAAATTTGTCCCCG
CTGGAAATCCAGACAGCGAAGATGATGAGGACAACGACGAAGATGGGACG
GTCCGCAAGCCAAAGCCCAGCAACTTGACATTGCCAACAATTTCGGACTC
GGCCTTCGTTCCGATGCCCTATATAGAAACCACCAACACCGCCATTAACG
CAACCACCACCACTAACAGCGGGAGCAGATCCCGCTCTCTCAACACACAC
ACCTCAGGCTCTGCCCAGGCCATAACCAAGCCAAAGCGTCGTCGTCGCGC
TCCCATGCTCACGGCCAAAAGACGACGCAAGGCCCTGGATACGGAATTAA
CAACTTCAGCAGATGCTGGAACTGAAGACAAAGCTCCTGCCGTGCGCAAA
GCGACGGCAGCACGCGGAGGATCCAAGCGCAGTCGAGGAGAATCGATTAC
GGCTCCTACGCCAGCGGAACCAATCAAATCTCCAGTAGCAATAAAAGCTC
CGACCAAGCGCAAATCAACCTCTAGAAGTGAAGCTGCAAAACGTAGTCGT
GTAGCCTCTGTGCAGAATGACACTGTTCTCACAGCGACATCCACCACTTC
AGCAGATTCAATTAGAAAAGCCGCAACCAAGCGCATTGCTGCTAATGAAA
AAGTCGCCAAGCGCAGTCGTGGTTCCGCAGCCTTGTCTGCGCGTCCTTCC
CCGCCAATGACACGTCAGCGGGCTCGTCAGCAGATCTCCGCAAGCACCTA
AAAGCTTTCTAGACCAT

BS09782.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:09:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-RC 1335 CG14657-PC 1..1335 17..1351 6675 100 Plus
CG14657-RB 1335 CG14657-PB 1..1335 17..1351 6675 100 Plus
CG14657-RD 591 CG14657-PD 1..588 17..604 2940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:09:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-RC 2975 CG14657-RC 514..1848 17..1351 6675 100 Plus
CG14657-RB 2414 CG14657-RB 514..1848 17..1351 6675 100 Plus
CG14657-RD 2888 CG14657-RD 1309..2056 604..1351 3740 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4819107..4819739 1351..719 3165 100 Minus
3R 32079331 3R 4820333..4820919 603..17 2935 100 Minus
3R 32079331 3R 4819794..4819910 720..604 585 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:09:48 has no hits.

BS09782.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:39:23 Download gff for BS09782.complete
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 1..1335 17..1351 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:25:20 Download gff for BS09782.complete
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 504..1844 8..1351 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:07:20 Download gff for BS09782.complete
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 514..1846 17..1349 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:39:23 Download gff for BS09782.complete
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 504..1844 8..1351 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:04:37 Download gff for BS09782.complete
Subject Subject Range Query Range Percent Splice Strand
CG14657-RB 514..1846 17..1349 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:04:37 Download gff for BS09782.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4819109..4819737 721..1349 100 <- Minus
3R 4819794..4819910 604..720 100 <- Minus
3R 4820333..4820919 17..603 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:07:20 Download gff for BS09782.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 644831..645459 721..1349 100 <- Minus
arm_3R 645516..645632 604..720 100 <- Minus
arm_3R 646055..646641 17..603 100   Minus

BS09782.pep Sequence

Translation from 16 to 1350

> BS09782.pep
MLLAAAGPPAYDAGKLSNNAGSGSSNVGSGGVGTPTASSSRPSAASALMK
TLSVRLHRGTEFIKDTVHKALVMSAPTPVAPATAPAPKIVDHSLKRKLSG
AGGLMGCSSIGSMTSSIAGSSRSHHYALTSQVASSQVIPLPSQVPTAAFL
RTYTVAPTALHRSAAARKRNPSTDSLLMDLCLFKPIRPMPITPIKIHKFR
GFEVKKPKFVPAGNPDSEDDEDNDEDGTVRKPKPSNLTLPTISDSAFVPM
PYIETTNTAINATTTTNSGSRSRSLNTHTSGSAQAITKPKRRRRAPMLTA
KRRRKALDTELTTSADAGTEDKAPAVRKATAARGGSKRSRGESITAPTPA
EPIKSPVAIKAPTKRKSTSRSEAAKRSRVASVQNDTVLTATSTTSADSIR
KAATKRIAANEKVAKRSRGSAALSARPSPPMTRQRARQQISAST*

BS09782.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG14657-PC 444 CG14657-PC 1..444 1..444 2210 100 Plus
CG14657-PB 444 CG14657-PB 1..444 1..444 2210 100 Plus
CG14657-PD 196 CG14657-PD 1..196 1..196 981 100 Plus