Clone BS09791 Report

Search the DGRC for BS09791

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:97
Well:91
Vector:pDNR-Dual
Associated Gene/Transcriptpor-RA
Protein status:BS09791.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS09791.3prime Sequence

946 bp (845 high quality bases) assembled on 2006-04-19

> BS09791.3prime
ATGGTCTAGAAAGCTTCTACGAGATGAACAGGTAAAGGACGAAGGTGCCC
AAACCGATGTAGTGGCTGAGATAGCCAGCCTGCTGCCAGTGCCACAGGAA
GGAGTCGCCATCCTCGCCGACTTCCAGGTCATCGCCCAGCAGCACGACGC
CCAGATAGGCCAGGTGGAAGATGGCCAGCGCCGTGAATGCCAGATTAGTG
AGCCTCGCCAGCCAGTAGGACAGGGAGTTCAATCGCCGTTTGCTCGGGCA
GTGGCTATACCGACATCGTTCCTTGCCCGGACACAGATTGGCAGTGATGC
AGGCATTCAGGAGGCTGGCGAGCTGCCGCCTGAGCAGCGATTCACCCTCG
GCTAGGAACGCCAGCGAGATGAGCACCAGATAGATGCGCAGATCCATGCC
GTGCAGCAGGCTGGACACCAGATAGGTGGAGAGCACGACCACCAGGATGC
GTCCCCTCGAGGTGGACGCGGTGGGCTTGCAGGGCGCGTAGATGTACCGT
TTGAGCCACTCGTGCATGGGAATGTTCCAGCTCCGGACCAATGAGCTGAT
CGAGCGCGGCCACTCGATGCGCCAGGGCTGCGAGATCAACGGACCCAGCA
TGTCCGACTCCTTGGTGGCACCGTCCAGTCGCTGATCGGAGGCTACCAGC
AGCGCCTGCGCCATCATGCCCACAAAGTAGTGGCTGCTGCGCACACTCAG
TGCGTCCCAGTACATGACCAGGAAGTGCGAGCTATCCCCGAAGAAGTCAC
TCAGCGCCGGAGCCACGCAATTGGACACGGTCACGGCCAGCACGCAGATC
ACCACGTTGGGCAAGAGGCGACGCANGCTGACCAGCCAGCTATTCCGTGG
CACCAGACAGTCCATGTAGCAGCCGAAGCTCACCCAGGGCCCCAAGGCGC
AGGTGGCCGGACTGTAGATGTAGCCCAGGTAAGGCAACGGACCCGG

BS09791.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG6205-PA 1578 por-RA 664..1578 931..17 4556 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:16:41
Subject Length Description Subject Range Query Range Score Percent Strand
por-RC 2257 CG6205-RC 750..1680 946..16 4599 99.7 Minus
por-RB 1848 CG6205-RB 747..1677 946..16 4599 99.7 Minus
por-RA 2331 CG6205-RA 747..1677 946..16 4599 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 17:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18378175..18379105 16..946 4599 99.6 Plus
Blast to na_te.dros performed on 2015-01-30 17:16:36 has no hits.

BS09791.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:20:05 Download gff for BS09791.3prime
Subject Subject Range Query Range Percent Splice Strand
por-PA 649..1578 17..946 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:33:37 Download gff for BS09791.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6205-PA 649..1578 17..946 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:34:26 Download gff for BS09791.3prime
Subject Subject Range Query Range Percent Splice Strand
por-RA 747..1679 12..946 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:58:25 Download gff for BS09791.3prime
Subject Subject Range Query Range Percent Splice Strand
por-RA 747..1679 12..946 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:58:25 Download gff for BS09791.3prime
Subject Subject Range Query Range Percent Splice Strand
X 18378173..18379105 12..946 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:34:26 Download gff for BS09791.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18272206..18273138 12..946 99   Plus

BS09791.5prime Sequence

937 bp (715 high quality bases) assembled on 2006-04-19

> BS09791.5prime
GAAGTTATCAGTCGACATGGACTACCAGTACTTCGAGGAGGAATCGGACT
ACATTGATCTGGACGAGGAGGAGGAGGATGACGACGTGGTGACAGCCGGC
AGCTTGGACCACAGATTTGGGCAGCCAAACGGCGAGGAGGACTATTATTT
CGGCGGGGACGATGTGGAGGAGGAGCTGGTGGTAGATGGACACGGTGTCC
TGGAGCTGGCCGGGCGCCTACTCGAGAGCCTGCAGAGCTGCGTGCAGCCA
TCTGTGCTGCAGGTCATGCAGTATGTGGCGCCCATGCTGCTCCTCTGCCT
CCTGTGCCGCCTGCTGTGCCTCCTCTACTCGCAGCGCAGACGCCTCACCA
GCCTGGCACCGCTGCATTTGTTCCACTTCGCCTGCGGCTTGATTATACTG
CAGATCACGGTGGGCTACCGACTGCTCCTACTTCTCCTGCTGGCCGCCGT
GGGCTACCTGCTGCTCCAGCTATTGCGACTGGGACGAAGAGGAGCTCAAG
TTCTGGCCGTTCTAACCGTGGGCAGCCAGTTCCTGTACGAACTGCTCATT
TGGCGGCGGCGCAGTGACTGGCCACAGCTGCGCGGCATCCAGATGGTGGT
CAATATGAAGCTTATCTCGCTGGGCTTCGACCTGACCGCCAGTGGGCAGC
TGCAGGCGAGGATTCCGGGTCCGTTTGCCTACCTGGGCTACATCTACAGT
CCGGCCACCTGCGCCTTGGGGCCCTGGGTGAGCTTCGGCTGCTACATGGA
CTGTCTGGTGCCACGGAATAGCTGGCTGGTCAGCCTGCGTCGCCTCTTGC
CCCACGTGGTGATCTGCGTGCTGGCCGTGACCGTGTCCAATTGCGTGGCT
CGGGCGCTGAGTGACTTCTTCGGGGATAGCTCGCACTTCCTGGTCATGTA
CTGGGACGCACTGAGTGTGCGCAGCAGCCACTACTTT

BS09791.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 18:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG6205-PA 1578 por-RA 1..921 17..937 4555 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:17:46
Subject Length Description Subject Range Query Range Score Percent Strand
por-RC 2257 CG6205-RC 102..1022 17..937 4575 99.8 Plus
por-RB 1848 CG6205-RB 99..1019 17..937 4575 99.8 Plus
por-RA 2331 CG6205-RA 99..1019 17..937 4575 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:17:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18378833..18379753 937..17 4575 99.8 Minus
Blast to na_te.dros performed on 2015-02-12 06:17:43 has no hits.

BS09791.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 10:20:06 Download gff for BS09791.5prime
Subject Subject Range Query Range Percent Splice Strand
por-PA 1..921 17..937 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 11:33:38 Download gff for BS09791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6205-PA 1..921 17..937 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 13:34:59 Download gff for BS09791.5prime
Subject Subject Range Query Range Percent Splice Strand
por-RA 94..1019 13..937 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:03:44 Download gff for BS09791.5prime
Subject Subject Range Query Range Percent Splice Strand
por-RA 94..1019 13..937 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:03:44 Download gff for BS09791.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18378833..18379755 13..937 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 13:34:59 Download gff for BS09791.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18272866..18273788 13..937 99   Minus

BS09791.complete Sequence

1610 bp (1610 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ636481

> BS09791.complete
GAAGTTATCAGTCGACATGGACTACCAGTACTTCGAGGAGGAATCGGACT
ACATTGATCTGGACGAGGAGGAGGAGGATGACGACGTGGTGACAGCCGGC
AGCTTGGACCACAGATTTGGGCAGCCAAACGGCGAGGAGGACTATTATTT
CGGCGGGGACGATGTGGAGGAGGAGCTGGTGGTAGATGGACACGGTGTCC
TGGAGCTGGCCGGGCGCCTACTCGAGAGCCTGCAGAGCTGCGTGCAGCCA
TCTGTGCTGCAGGTCATGCAGTATGTGGCGCCCATGCTGCTCCTCTGCCT
CCTGTGCCGCCTGCTGTGCCTCCTCTACTCGCAGCGCAGACGCCTCACCA
GCCTGGCACCGCTGCATTTGTTCCACTTCGCCTGCGGCTTGATTATACTG
CAGATCACGGTGGGCTACCGACTGCTCCTACTTCTCCTGCTGGCCGCCGT
GGGCTACCTGCTGCTCCAGCTATTGCGACTGGGACGAAGAGGAGCTCAAG
TTCTGGCCGTTCTAACCGTGGGCAGCCAGTTCCTGTACGAACTGCTCATT
TGGCGGCGGCGCAGTGACTGGCCACAGCTGCGCGGCATCCAGATGGTGGT
CAATATGAAGCTTATCTCGCTGGGCTTCGACCTGACCGCCAGTGGGCAGC
TGCAGGCGAGGATTCCGGGTCCGTTTGCCTACCTGGGCTACATCTACAGT
CCGGCCACCTGCGCCTTGGGGCCCTGGGTGAGCTTCGGCTGCTACATGGA
CTGTCTGGTGCCACGGAATAGCTGGCTGGTCAGCCTGCGTCGCCTCTTGC
CCAACGTGGTGATCTGCGTGCTGGCCGTGACCGTGTCCAATTGCGTGGCT
CCGGCGCTGAGTGACTTCTTCGGGGATAGCTCGCACTTCCTGGTCATGTA
CTGGGACGCACTGAGTGTGCGCAGCAGCCACTACTTTGTGGGCATGATGG
CGCAGGCGCTGCTGGTAGCCTCCGATCAGCGACTGGACGGTGCCACCAAG
GAGTCGGACATGCTGGGTCCGTTGATCTCGCAGCCCTGGCGCATCGAGTG
GCCGCGCTCGATCAGCTCATTGGTCCGGAGCTGGAACATTCCCATGCACG
AGTGGCTCAAACGGTACATCTACGCGCCCTGCAAGCCCACCGCGTCCACC
TCGAGGGGACGCATCCTGGTGGTCGTGCTCTCCACCTATCTGGTGTCCAG
CCTGCTGCACGGCATGGATCTGCGCATCTATCTGGTGCTCATCTCGCTGG
CGTTCCTAGCCGAGGGTGAATCGCTGCTCAGGCGGCAGCTCGCCAGCCTC
CTGAATGCCTGCATCACTGCCAATCTGTGTCCGGGCAAGGAACGATGTCG
GTATAGCCACTGCCCGAGCAAACGGCGATTGAACTCCCTGTCCTACTGGC
TGGCGAGGCTCACTAATCTGGCATTCACGGCGCTGGCCATCTTCCACCTG
GCCTATCTGGGCGTCGTGCTGCTGGGCGATGACCTGGAAGTCGGCGAGGA
TGGCGACTCCTTCCTGTGGCACTGGCAGCAGGCTGGCTATCTCAGCCACT
ACATCGGTTTGGGCACCTTCGTCCTTTACCTGTTCATCTCGTAGAAGCTT
TCTAGACCAT

BS09791.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:24:55
Subject Length Description Subject Range Query Range Score Percent Strand
por-RC 1578 CG6205-PC 1..1578 17..1594 7890 100 Plus
por-RB 1578 CG6205-PB 1..1578 17..1594 7890 100 Plus
por-RA 1578 CG6205-PA 1..1578 17..1594 7890 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:24:57
Subject Length Description Subject Range Query Range Score Percent Strand
por-RC 2257 CG6205-RC 102..1680 17..1595 7895 100 Plus
por-RB 1848 CG6205-RB 99..1677 17..1595 7895 100 Plus
por-RA 2331 CG6205-RA 99..1677 17..1595 7895 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18378175..18379753 1595..17 7895 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:24:54 has no hits.

BS09791.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:39:24 Download gff for BS09791.complete
Subject Subject Range Query Range Percent Splice Strand
por-RA 1..1578 17..1594 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:25:22 Download gff for BS09791.complete
Subject Subject Range Query Range Percent Splice Strand
por-RA 94..1679 13..1599 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:28 Download gff for BS09791.complete
Subject Subject Range Query Range Percent Splice Strand
por-RA 99..1676 17..1594 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:39:25 Download gff for BS09791.complete
Subject Subject Range Query Range Percent Splice Strand
por-RA 94..1679 13..1599 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:12:40 Download gff for BS09791.complete
Subject Subject Range Query Range Percent Splice Strand
por-RA 99..1676 17..1594 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:12:40 Download gff for BS09791.complete
Subject Subject Range Query Range Percent Splice Strand
X 18378176..18379753 17..1594 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:28 Download gff for BS09791.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18272209..18273786 17..1594 100   Minus

BS09791.pep Sequence

Translation from 16 to 1593

> BS09791.pep
MDYQYFEEESDYIDLDEEEEDDDVVTAGSLDHRFGQPNGEEDYYFGGDDV
EEELVVDGHGVLELAGRLLESLQSCVQPSVLQVMQYVAPMLLLCLLCRLL
CLLYSQRRRLTSLAPLHLFHFACGLIILQITVGYRLLLLLLLAAVGYLLL
QLLRLGRRGAQVLAVLTVGSQFLYELLIWRRRSDWPQLRGIQMVVNMKLI
SLGFDLTASGQLQARIPGPFAYLGYIYSPATCALGPWVSFGCYMDCLVPR
NSWLVSLRRLLPNVVICVLAVTVSNCVAPALSDFFGDSSHFLVMYWDALS
VRSSHYFVGMMAQALLVASDQRLDGATKESDMLGPLISQPWRIEWPRSIS
SLVRSWNIPMHEWLKRYIYAPCKPTASTSRGRILVVVLSTYLVSSLLHGM
DLRIYLVLISLAFLAEGESLLRRQLASLLNACITANLCPGKERCRYSHCP
SKRRLNSLSYWLARLTNLAFTALAIFHLAYLGVVLLGDDLEVGEDGDSFL
WHWQQAGYLSHYIGLGTFVLYLFIS*

BS09791.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:49:43
Subject Length Description Subject Range Query Range Score Percent Strand
por-PC 525 CG6205-PC 1..525 1..525 2738 100 Plus
por-PB 525 CG6205-PB 1..525 1..525 2738 100 Plus
por-PA 525 CG6205-PA 1..525 1..525 2738 100 Plus